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Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

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Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_10401 LG2 44575071 44580566 PREDICTED: homeobox-leucine zipper protein ATHB-8
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   procambium histogenesis, response to auxin, primary shoot apical meristem specification, primary shoot apical meristem specification, response to auxin, positive regulation of cell differentiation, positive regulation of cell population proliferation, response to auxin, meristem initiation, primary shoot apical meristem specification, procambium histogenesis, primary shoot apical meristem specification, response to auxin, procambium histogenesis, procambium histogenesis, xylem development, positive regulation of cell differentiation, primary shoot apical meristem specification, procambium histogenesis
Cellular Component   located in   nucleus, nucleus
Molecular Function   enables   transcription cis-regulatory region binding, transcription cis-regulatory region binding, DNA-binding transcription factor activity, lipid binding
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
No SNPs found.

Sequence Details:

Protein Sequence:
>Vu_10401.1
MMAVSSACKDGSKVAMDNGKYVRYTPEQVEALERLYHECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQGVNRKLTAMNKLLMEENDRLQKQVSQLVYENSFFRQQTQNATVATTDTSCESVVTSGQRHLTPQHPPRDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCPGVAARACGLVGLEPARVAEILKDKLSWFRDCRTVDVLNVMSTGNGGTIELLYMQLYAPTTLAPGRDFWLLRYTSLLEDGSLVVCERSLNNTQNGPAMPPVQHFVRADMLPSGYLIRPCEGGGSIIHIVDHMVLEPWSVPEVLRPLYESSMLLSQRTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSKGFNEAVNGFADDGWSMLESDGIDDVTLLVNSSPSKMMGANLGYNTNGFPSMSSSVLCAKASMLLQNVPPAILLRFLREHRSEWADSSIDAYSAAAIKAGPCSLPGARPGGGFGGQVILPLAHTIEHEEFMEVIKLENMGYYRDDMTIPGDVFLLQLCSGVDEHAVGTSAELVFAPIDASFSDDAPILPSGFRIIPLDSSSDAASPNRTLDLASALEVGTTANKAAGDNAGHSGSTKSVMTIAFQFAFEVHLQENIATMARQYVRSIIASVQRVSLALSPSRFGSHNAFHLPPGTPEAQTLARWISNSYRFYLGVELLKCEGSESILKPLWHHSDAMLCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDNGKKTLCSEFPQIMQQGFMCIQGGICLSSMGRPVSYERAVAWKVLNEEESAHCICFMFINWSFV*


CDS Sequence:
>Vu_10401.1
ATGATGGCTGTGAGTTCGGCCTGCAAAGATGGGAGCAAGGTGGCAATGGACAACGGCAAGTATGTCCGCTATACACCCGAACAGGTGGAAGCACTGGAAAGGCTCTACCATGAATGCCCCAAACCAAGTTCCCTCCGCCGCCAGCAACTCATAAGAGAGTGCCCCATTCTCTCCAACATTGAACCCAAACAGATCAAGGTTTGGTTCCAAAACCGAAGGTGTAGAGAGAAGCAGCGGAAAGAAGCGTCACGGCTGCAAGGTGTGAACAGGAAGCTGACAGCAATGAATAAGTTACTAATGGAGGAAAACGACAGATTGCAGAAGCAGGTGTCACAGCTGGTATATGAAAACAGCTTTTTCCGCCAACAGACTCAGAACGCTACGGTTGCCACGACAGACACGAGCTGTGAGTCGGTGGTGACGAGCGGTCAGCGGCACTTGACGCCCCAGCATCCCCCGAGGGATGCTAGCCCTGCAGGACTTTTGTCCATTGCAGAGGAGACTTTAGCAGAGTTTCTTTCAAAGGCCACTGGAACTGCTGTCGAGTGGGTCCAAATGCCCGGGATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCTATTTCTCACGGTTGCCCTGGAGTGGCCGCACGTGCCTGCGGCCTTGTGGGTCTAGAACCTGCCAGGGTTGCCGAAATCCTCAAAGATAAGCTCTCATGGTTTCGTGATTGCCGAACCGTGGACGTTCTAAATGTCATGTCCACTGGAAATGGTGGAACCATTGAGCTACTTTACATGCAGTTGTATGCGCCAACAACTTTAGCACCTGGTCGTGACTTCTGGTTGCTGCGCTACACATCACTTTTGGAAGATGGTAGTCTAGTGGTCTGTGAAAGATCACTCAACAATACTCAGAATGGTCCTGCTATGCCTCCGGTGCAGCATTTTGTTAGAGCTGACATGCTGCCAAGTGGCTATCTGATAAGACCTTGCGAAGGAGGGGGGTCCATTATCCATATTGTTGATCATATGGTTCTAGAGCCATGGAGTGTTCCTGAAGTTTTGCGCCCACTTTATGAGTCATCAATGTTGCTATCTCAGAGGACTACTATGGCGGCCTTACGTCATTTGAGGCAGATTTCTCAAGAGGTTTCTCAGCCAAGTGTAACAGGATGGGGAAGAAGGCCTGCAGCTTTACGTGCACTGAGTCAGAGATTGAGCAAGGGCTTTAATGAAGCTGTCAATGGCTTTGCCGATGATGGCTGGTCCATGTTAGAAAGTGATGGCATAGATGATGTCACTCTTCTAGTGAATTCCTCACCTAGCAAGATGATGGGAGCTAACCTTGGCTATAACACCAATGGATTTCCTTCTATGAGCAGTTCTGTGCTATGTGCCAAAGCATCCATGTTGCTACAGAATGTTCCTCCAGCAATTCTTCTTAGATTCTTGAGGGAGCACCGGTCAGAATGGGCAGACAGCAGCATTGATGCCTACTCAGCTGCTGCCATTAAAGCCGGTCCCTGTAGCTTGCCAGGGGCCCGACCAGGAGGAGGTTTTGGGGGTCAGGTTATTCTTCCGCTAGCTCACACAATCGAGCATGAAGAGTTCATGGAGGTTATTAAGCTTGAAAACATGGGCTACTATAGGGACGACATGACTATTCCTGGTGATGTTTTCCTCTTGCAACTTTGCAGTGGAGTGGACGAGCATGCAGTTGGCACCAGCGCAGAACTTGTTTTTGCTCCAATAGATGCATCTTTCTCTGATGATGCACCCATTTTACCTTCTGGGTTTCGCATTATACCACTTGATTCTAGCTCAGATGCTGCTAGTCCAAACCGGACACTTGATCTGGCTTCTGCACTTGAGGTTGGAACCACAGCAAACAAAGCAGCCGGTGATAACGCAGGTCATTCTGGGAGCACAAAATCTGTGATGACAATAGCATTCCAGTTTGCATTTGAAGTCCACCTTCAAGAGAACATAGCAACCATGGCCAGACAGTATGTTCGTAGTATCATTGCCTCTGTTCAAAGGGTTTCATTAGCACTTTCTCCTTCCCGTTTTGGTTCTCACAATGCATTTCACTTACCACCTGGCACTCCTGAGGCTCAAACACTTGCTCGATGGATCTCTAACAGCTATAGGTTCTATCTAGGGGTAGAACTTCTTAAATGTGAAGGCAGTGAATCCATTCTCAAGCCTCTTTGGCATCACTCAGATGCAATGTTGTGCTGCTCTTTAAAGGCATTACCCGTTTTTACGTTTGCAAATCAAGCTGGACTTGACATGCTTGAAACAACTTTGGTTGCACTTCAAGACATAACCCTGGAAAAGATTTTTGATGACAATGGAAAGAAAACCCTGTGCAGCGAGTTCCCCCAGATAATGCAGCAGGGTTTCATGTGTATTCAAGGTGGAATCTGTTTGTCGAGCATGGGTAGGCCAGTGTCCTATGAGAGAGCAGTTGCATGGAAAGTATTAAACGAAGAAGAATCTGCTCATTGCATCTGTTTTATGTTCATCAATTGGTCTTTTGTCTGA


Promoter Sequence:
>Vu_10401::LG2:44580566-44582566(-)
ACATAATCTTAATAATATATATTTTGTTGTATGCACAGCTAGTTTCAAACTTTTGAATACTATTCTAGGATTACAAATGCGATTCTCCTTTTTCACAAGTCTTAACTACTACAAACACCGTAATGTGATTTCAGGTCAAATTGAAATACACGAAATAAGGAACCTGTGTTTAGACTCTGGCATAATTATTTTGACCAAGACAAACCTAAAACGAGATACGTAGGGCAACATCCTCGACCAATGTAGATAGAAAAATAAAGGTGGTCTTTGTAATCTTAAACCAGCCTCTTTTATATCAGCAATAATCATATTCATCACTTCATCTATAATAATGGAAATGAAGGAAGGAACCGTTTTCTCTTCCTTCCCATGCTTACTGGTATACAATACTTTGCGTGCGTATCAGTGCATTAAGTACACGATTTTTCCTCATGGATGATAACCTCAGTTTAACATCATCATTGAACATATTTATGGCATGGATAGGGACAGGTTCTCATGGCCCTGTCATTTTTTTCTTTTAAAACACTTAAGTTATATAATATAATAGTTTACCTATTTATTTAAAAAATACCATAATATCGTTAATATGAAAGTACATTTTATTCGAAAGATGGTAGGACCGATCCTCTGTATGGAAGAAGAAATTGTGAAAATATGAGGTGAAATGAAAATGCATTCGAAATTAAACGTAGCTTCCCGCATGCAGAAAACCCTAATAATGGTGTCTCAGTGATGCCCTTAGGACTCCATCACCAACTCCTCTAACTCTCCAAATATCATATTGAGGCGACACAGACATAATTATGGAGTCAAGAAAAAAATGATGAGTATAAAATTATCTACTATTAATTAGTTAATGCATATTTCTCTACCAACCATTATTCTCTCACCTCTCACAAGCACACACTGTTTATATTCCTACAAAACATTCATTCCTAACTAATTACAATAACTAAAGAAAAAGTACTGTAATTTATGCACTGCATTTCAACTGCCACCAATAAATTAACCTACCAATTCATGCTTATGCTAATGTGTATAATAAAGGGCTAATTTCTGTTTTCTTTTTCCATTAACATCCATAAAAAGAGAAAAAAATATACTTTCTACTGCTCATAATAATCTTATTTATTTGTGTAACCTTTACTTGATTATATCATGAAATATGCTTGTAATTTCTGAATGGAAAAGAAACTGAACAATACAGCTGTCTTTGGCTCACGTTGTCCACGACGATGATACAACCTCAGTTTGAGGTGTATAAATACGTGAGACCACTCTGCATGTCAGTAATTTGTATTTTGATTTTGAAGAAAAGAGAGAGAAAAAAAAAAAAACAAATAAAACATAGCTTGTTGTCCGATATATGGTTGTAATCTTTGTAAATAGAATGTGGACCATGCATAGACGGTATAAATTATGATGCAGCATGGGCAAAGGGTATATTTGTGCGAAGGAAGGACAGAGCACATTTTTGACAGTGGCAGTGACATACATAAAAATGAAACGAAACGGTATCTGGTTTTGTCTATTGTGCATTCTCCAACGTCCAATAATACTATACAGTTTTCAGCGCACGCGTCGTGAGCGAGAAGGCGGGTGCCACTTTTTTTTTTTTTTTTAATTTGTTTCTCAGAAGTCACAATAGAGAGAGAGTGGGGTTTCCTTTCCAAGTGTTGGAAAGTGCCAAAATGAAGTAGTGCAAGAAAAGCAACAGCAAAAGCAACAGGCAAAACAGCTAAAGAAGAACAGAAAGCAGAGGGAGAATGATGTGAAAACAAAAAATGTTTCCCTATTCTGTCTGATATTTGGGGTTATTCTCTTATAAGCAACCCCATCTCTCTGTCCCATCCCAACATACCAGCACTCGTCCTTTTCCATTCTTTATACAGACACACACACAAAATAAAGAAAAACAACCTTTTCCGTTCACTTCCCATCCCTCTCTCTATCTCTCTCTTCTCCCATATATCATCCAATATAATATAATACAATAC


Gene Sequence:
>Vu_10401(-)
AACCAACAACTGTCACAGACAAACTCTGAGTGGTACCTCTTTTAAGTTTCTACTTTCATTCTCCTTCTCCCTCTCCCTCTCCTCTCATTCATGTCCAACTCCAACTCATCTCAAACCTCCTCTTCTGATTAATGAAACCTCTTCTTTTCTTTTGTTTCTCTCGTTCAAACCAATAAATACAATAAATCGAGAAGGGATGATGGCTGTGAGTTCGGCCTGCAAAGATGGGAGCAAGGTGGCAATGGACAACGGCAAGTATGTCCGCTATACACCCGAACAGGTGGAAGCACTGGAAAGGCTCTACCATGAATGCCCCAAACCAAGTTCCCTCCGCCGCCAGCAACTCATAAGAGAGTGCCCCATTCTCTCCAACATTGAACCCAAACAGATCAAGGTTTGGTTCCAAAACCGAAGGTAACTTCTTCCCTTCCATCCTATTCTCCTTCTTTCTTCAATTCTTTCCTGATCACCTTCACTTTACATCCTTAGCTTTCAACATCCATCTGCATACATAAACTTTGTGTTGAAATTTGAAAGTAATTTGATTTATCAAAAGGGTTGCTTGATTTCTGTAAATCTGACTTTTTTTTATTAATCCTCTCTTTGTATTTCTTGTCTCCTTTTCTTCCCTTCAACCAATATTTTTGTTATCTTTGGCAAAGATTTTTAAAAAATTGGTGGTAATTTTTCATTTTTCACGACCTACCAACCCAAGTTCAGGTCTTTCTTGTTTGTCCTTTTTTTTCTTCTTCTTGGTCTTGTTTCATGACTCAACAAGACCTTAATTAAAATTTTCGCAGTTAATAATTTCAGAGGGGTAATAATTATGGTGTTTTGTTGGTTGTTGCAGGTGTAGAGAGAAGCAGCGGAAAGAAGCGTCACGGCTGCAAGGTGTGAACAGGAAGCTGACAGCAATGAATAAGTTACTAATGGAGGAAAACGACAGATTGCAGAAGCAGGTGTCACAGCTGGTATATGAAAACAGCTTTTTCCGCCAACAGACTCAGAACGTAATAAAACCATACTATATTTTTTCTTCATCACATACAAATTAAAACGGTGATTCATATTCATATCTACTGCAATCATTTCCTCCAGGCTACGGTTGCCACGACAGACACGAGCTGTGAGTCGGTGGTGACGAGCGGTCAGCGGCACTTGACGCCCCAGCATCCCCCGAGGGATGCTAGCCCTGCAGGGTGAGTGAATAGTGAACTGTGAAAACGAAAATAAAAACCTGGTTTTTCACATTTCCTGTTGGATCCTATGTTTTATCTGTCATTGTACTGATGGAATATTATTATTCTCGTGCTTTGCGTTGTCTTTGTCTCTTTTCTGCAGACTTTTGTCCATTGCAGAGGAGACTTTAGCAGAGTTTCTTTCAAAGGCCACTGGAACTGCTGTCGAGTGGGTCCAAATGCCCGGGATGAAGGTTACCGCACTTTCCTTTTTCTCTTAAACTGTTAATTCCATTTCCGTTTAGTGAAAAAAAGTACATCCACCTTCAATTAACGAAACCAGATTGTTAATTAAACAAATAATCTTCTCAGTCCCTAGTTCCTAGCTCCTACCCTCCGCACTCAACTGTTTTCTTATTTATTTCGTAATCTGTCAAAGCCTCGTATTAATTTTCACTTGAAGCATCTATTAACAAATTGATTTTATTAAGAATTTCCAAAGACACACCTTAAATGATCTGTTGCTTTTATCTGGTTAATGGGAAAAGTGGATGTAATTTTATTTTTACCATGTTTGAAAGCTCTATTCTAGTGCCGTGCAACATTAATATCTTGGGCATTTTCTAGTTTGTGGTATAATGTTAGTCTTAACGTTTGTTCTGAATGTTTGTAGCCTGGTCCGGATTCCATTGGAATCGTTGCTATTTCTCACGGTTGCCCTGGAGTGGCCGCACGTGCCTGCGGCCTTGTGGGTCTAGAACCTGCCAGGGTGAGTTCCTTCCTCTTTCTTAGAGGACTAATCCTATGGAATTATGTGGGGATGCATTGATTGAAAATTAAAATGAAAATGTTGTGCATAGGTTGCCGAAATCCTCAAAGATAAGCTCTCATGGTTTCGTGATTGCCGAACCGTGGACGTTCTAAATGTCATGTCCACTGGAAATGGTGGAACCATTGAGCTACTTTACATGCAGGTATAACAATATAATCTGCATCTCTCAGAATTAGTATACTTGCAAGCTTTAGTAAATGCAAATTTCAACATATGTCATTTTGTTCAGTTGTATGCGCCAACAACTTTAGCACCTGGTCGTGACTTCTGGTTGCTGCGCTACACATCACTTTTGGAAGATGGTAGTCTAGTGGTATGTAACTTACGGTTCTTTGTTATCTTTAGAACAGTTCTAAACTTTTCATTCTCCTCCCCGGCCTAACTCTGACGCTCATGTAATTTGAACAATGTTAGGTCTGTGAAAGATCACTCAACAATACTCAGAATGGTCCTGCTATGCCTCCGGTGCAGCATTTTGTTAGAGCTGACATGCTGCCAAGTGGCTATCTGATAAGACCTTGCGAAGGAGGGGGGTCCATTATCCATATTGTTGATCATATGGTTCTAGAGGTTTGTCAAATAAACACCTTTATGAAGTGACGTGAAATTCTTCCTTCTTACTAGTTTGATAAATTATAATGACTTTCTGCCTCAGCCATGGAGTGTTCCTGAAGTTTTGCGCCCACTTTATGAGTCATCAATGTTGCTATCTCAGAGGACTACTATGGCGGTAAGTCGTTTGTTTCTGCCTAATAGCTTTCTCTGCACATTTAAAACGATCTGGAATCCTAAATGTGATGCTTGTATAAGCCTTTGTATTTTCACCTGTTAAGGACTGTTGTAATTGTAATTGTCATTCAGGCCTTACGTCATTTGAGGCAGATTTCTCAAGAGGTTTCTCAGCCAAGTGTAACAGGATGGGGAAGAAGGCCTGCAGCTTTACGTGCACTGAGTCAGAGATTGAGCAAGTTTGTGTCACTAATTGTCCCTTGCTTGATATAATTGACTAGTTATAGTATCTAACTTTAAACTTTGTTTTTTCGCAGGGGCTTTAATGAAGCTGTCAATGGCTTTGCCGATGATGGCTGGTCCATGTTAGAAAGTGATGGCATAGATGATGTCACTCTTCTAGTGAATTCCTCACCTAGCAAGATGATGGGAGCTAACCTTGGCTATAACACCAATGGATTTCCTTCTATGAGCAGTTCTGTGCTATGTGCCAAAGCATCCATGTTGCTACAGGTAGTATATACTTAACTCAAGCAACATAAATTGATTCTTTACTTTCCAATTTCCACCTTATTTTACTGTATTTTGTTGTCTCATACTCTCTCTGTCCTTGTAGAATGTTCCTCCAGCAATTCTTCTTAGATTCTTGAGGGAGCACCGGTCAGAATGGGCAGACAGCAGCATTGATGCCTACTCAGCTGCTGCCATTAAAGCCGGTCCCTGTAGCTTGCCAGGGGCCCGACCAGGAGGAGGTTTTGGGGGTCAGGTTATTCTTCCGCTAGCTCACACAATCGAGCATGAAGAGGCAAGTTATTTGCTTCTAATTTAGGCTTTTCCTGCATTGAATATAGTGTTTATTATTTAGCATTTTTTTTTCTTTCAAAAAGAAAATCAAATGGAAAACTCATACTTCTTTTGCCTTAGGATTTTGCATTAACATTCTTGTAGTTTTCTATAAGTGTGTACTGGTGCCTTGCTGACCCTTGATCTCTTAAACAGTTCATGGAGGTTATTAAGCTTGAAAACATGGGCTACTATAGGGACGACATGACTATTCCTGGTGATGTTTTCCTCTTGCAAGTAAGTATTTGTTTTACAGTACCATTTTCTTCGGCACATATCTTTCCATGTACTACCTCATTGCAATCCCGAATTGAGAGAAAAAAGAAAAGCTTTTAAAATTTGCTACCTAATCAGCCATGGGTTCCATTCTTTGCGTACTTGTTGGATTATTTCAGACTAAGGATGCATGAATGAAAACGAGATTTTTATTACAATTATATCTGCATATAGTTTAGTTTAGAAGGTTATTTCCAAACTCCAGAACACGGCTAACAGACCTGAGTGTCGCAAATGTTCACAGCTTTGCAGTGGAGTGGACGAGCATGCAGTTGGCACCAGCGCAGAACTTGTTTTTGCTCCAATAGATGCATCTTTCTCTGATGATGCACCCATTTTACCTTCTGGGTTTCGCATTATACCACTTGATTCTAGCTCAGTAAGTGGATTTTGCTTATACAAGTATTGTGTTGAGTTAGGATTCTGATTTTTTTATTTGTTTTCTATTATGGTAGTCTTACGTGTGATATGATGCAGGATGCTGCTAGTCCAAACCGGACACTTGATCTGGCTTCTGCACTTGAGGTTGGAACCACAGCAAACAAAGCAGCCGGTGATAACGCAGGTCATTCTGGGAGCACAAAATCTGTGATGACAATAGCATTCCAGTTTGCATTTGAAGTCCACCTTCAAGAGAACATAGCAACCATGGCCAGACAGTATGTTCGTAGTATCATTGCCTCTGTTCAAAGGGTTTCATTAGCACTTTCTCCTTCCCGTTTTGGTTCTCACAATGCATTTCACTTACCACCTGGCACTCCTGAGGCTCAAACACTTGCTCGATGGATCTCTAACAGCTATAGGTGAGTCATTTAAAACCTAGACTATGTTGCTCAAGTTTCGAGAATTACCAAGGAAAGAAGCATGACCTATAATAGCCTGACACGTGCTATTATGATTGTTTCCATGGCAGGTTCTATCTAGGGGTAGAACTTCTTAAATGTGAAGGCAGTGAATCCATTCTCAAGCCTCTTTGGCATCACTCAGATGCAATGTTGTGCTGCTCTTTAAAGGTAATAATATCTTTTAGTATCTTTCTTATTCTGCAATGTTAATATTTATGACAGTATAAGTTAACATACATGATTTTTGCAGGCATTACCCGTTTTTACGTTTGCAAATCAAGCTGGACTTGACATGCTTGAAACAACTTTGGTTGCACTTCAAGACATAACCCTGGAAAAGATTTTTGATGACAATGGAAAGAAAACCCTGTGCAGCGAGTTCCCCCAGATAATGCAGCAGGTAAAATGTTTTCTGCAGGACCAAATAAAATCATTATTTACCTCTTCACTGATTATGTTTAAGTTTATAACATTTTAGCATGATTGTTGTTTGTTGCAGGGTTTCATGTGTATTCAAGGTGGAATCTGTTTGTCGAGCATGGGTAGGCCAGTGTCCTATGAGAGAGCAGTTGCATGGAAAGTATTAAACGAAGAAGAATCTGCTCATTGCATCTGTTTTATGTTCATCAATTGGTCTTTTGTCTGATAGATTAAACACTGTAGGATGTAGGAAAGAAAAGTAGAGAACAAGAGTACCTTAACTTTGGCGAATCCCTAGAATGCTTTAAACTCCAAGATCTATCTATGGTCCCATTTCCTTCTTTTTTTAATTATTTCTCCTTATTTTTCTTTT

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