Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_10383 LG2 44380376 44383520 PREDICTED: receptor-like protein kinase HSL1 isoform X1
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   defense response to fungus, leaf senescence, hormone-mediated signaling pathway, hormone-mediated signaling pathway, defense response to bacterium, response to molecule of bacterial origin, carboxylic acid metabolic process, defense response to fungus, protein phosphorylation, response to abscisic acid, regulation of signal transduction, protein phosphorylation, immune system process, shoot system development, regulation of signal transduction, regulation of defense response, defense response to bacterium, cellular response to organic cyclic compound, cellular response to oxygen-containing compound, indole-containing compound metabolic process, protein phosphorylation, response to chitin, regulation of signal transduction, protein phosphorylation, negative regulation of cell death, shoot system development, response to molecule of bacterial origin, protein phosphorylation, carboxylic acid metabolic process, protein phosphorylation, hormone-mediated signaling pathway, response to oxidative stress, cellular response to oxygen-containing compound, response to abscisic acid, leaf senescence, response to inorganic substance, indole-containing compound metabolic process, hormone-mediated signaling pathway, negative regulation of cellular process, response to salicylic acid, response to molecule of bacterial origin, defense response to bacterium, response to lipid, negative regulation of cell death, defense response to fungus, cellular response to organic cyclic compound
Cellular Component   located in   plasma membrane
Molecular Function   enables   protein kinase activity, protein kinase activity, protein binding, protein binding, protein kinase activity, kinase activity
SNP Position Effect Amino acid change
C/T 44380739 missense_variant p.Gly719Arg
G/A 44380757 missense_variant p.Leu713Phe
G/T 44381053 downstream_gene_variant
G/A 44381211 downstream_gene_variant
T/C 44381241 downstream_gene_variant
G/A 44381570 synonymous_variant p.Leu651Leu
T/C 44381594 missense_variant p.Ile643Val
C/T 44382367 missense_variant p.Gly385Asp
C/A 44382370 missense_variant p.Gly384Val
T/C 44382382 missense_variant p.His380Arg
G/T 44382531 synonymous_variant p.Pro330Pro
C/T 44382747 synonymous_variant p.Pro258Pro
A/T 44382855 stop_gained p.Tyr222*
A/T 44382870 missense_variant p.Asn217Lys
C/A 44383040 missense_variant p.Ala161Ser
G/T 44383363 missense_variant p.Pro53Gln

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_10383.1
MSKVPLFISFHFFLLFSVAVPSRVISETEQTILLTLKRELGDPPSLRSWKPSPSAPCDWTEIGCNSGGAVTKLVLSSKGITTTKSLPSTICNLTHLLELNLFNNFIAGEFPTTLYECSNLRYLNLSQNYLAGAIPADVDRLKTLTFLDLTANSFSGEIPAAIGNLLELQTLYLSANNFEGTVPREIGNLLNLEFLGLGYNLKLAPWEFPLEFRKLRNLRSMYMPQCNLIGEIPEYFGNIFTNLERLDLGKNKISGSIPRNLFSLSKLRFLYLFSNRLSGAIPSDTMQCLELIDLDFAKNNLTGSIPPEFGKLKNLSTLHLYENHLVGEIPVSLSQIPNLIYFRVFSNNLSGTLPPELGLHSKLTVFEVSENQLSGGLPEHLCAGGALIGVVAFSNNFSGVLPEWIGNCPSLATVQLYNNKFSGEVPLGLWTMNNLSSLILSNNSFSGPLPSQVFWNMTRIEIANNNFSGGISVGITSAKNLMFLDARNNMLLGEIPRELTQLSRLTALMLDGNQLSGALPSEIISWQSLNILTLSRNKLSGQITTAITALPRLAYLDLSQNDISGEIPPQFDRLRFVFLNLSSNRLSGKIPDEFNNLAFENSFLNNPHLCAYNPNVHLDNCLTKTASAAPQSSNSSSKSLALILAATAVVLSAIASLLFYMLKTQWGKKHCGHKNKVATWRLTSFQKLDLTEINFLSKYAYSTKINEKVDVYSFGVVLLELVTGRKPNISGERACSLVEWAWEHFNEAKSLTDAFDENIKEPRYAQEMANVFKLGLLCTSTLPSTRPSTKEILQVLRCCHSGSTRRKMGNEFDIAPLLGDTRYVCSYKESKAATNNSSW*


CDS Sequence:
>Vu_10383.1
ATGTCCAAAGTGCCCCTCTTTATTTCATTTCATTTCTTCCTGTTATTCAGCGTCGCTGTACCCTCTCGGGTAATTTCAGAAACTGAACAAACAATCCTACTCACTCTCAAACGTGAACTGGGAGACCCACCGTCGCTCCGATCATGGAAACCGTCGCCGTCTGCGCCGTGCGATTGGACGGAGATTGGATGCAACAGCGGCGGCGCCGTCACGAAGCTAGTCCTCTCCAGCAAGGGCATCACCACCACCAAGAGCCTCCCTTCCACAATCTGCAACCTCACACACCTACTCGAGCTTAACCTCTTCAACAACTTTATTGCCGGCGAGTTTCCGACAACCTTGTACGAATGCTCCAACCTCCGGTACCTCAACCTGTCGCAGAACTACCTCGCAGGAGCGATCCCCGCCGACGTGGACCGCCTCAAAACCCTCACTTTCCTCGACCTCACCGCCAACTCCTTCTCCGGAGAGATCCCGGCCGCGATCGGGAACCTGCTGGAACTGCAAACGCTGTATCTTTCCGCAAACAACTTCGAGGGAACCGTCCCCAGGGAAATCGGAAACTTGTTGAACCTCGAATTTTTGGGTTTGGGTTATAATCTTAAACTCGCGCCGTGGGAGTTCCCGTTGGAGTTTAGGAAATTAAGAAATTTGAGGTCTATGTATATGCCGCAGTGTAACTTGATCGGAGAGATTCCAGAATATTTCGGGAATATTTTCACGAACCTCGAACGGTTGGATTTGGGGAAGAACAAGATATCAGGGAGCATTCCGAGGAATTTGTTCTCGCTGAGTAAGTTGAGGTTCTTGTACCTGTTCAGTAACAGATTGTCGGGTGCGATTCCTAGTGATACGATGCAGTGTTTGGAATTAATCGACCTTGATTTCGCGAAGAATAATTTGACGGGTTCCATACCGCCAGAGTTTGGAAAATTAAAGAACTTGAGTACCTTGCACTTGTACGAAAATCACTTAGTCGGTGAGATTCCCGTAAGTTTAAGCCAAATTCCTAATCTCATCTATTTCAGGGTTTTTAGCAATAACTTGAGTGGAACACTGCCTCCAGAACTAGGCTTGCATTCCAAGCTTACAGTGTTTGAGGTTTCTGAGAACCAGCTCAGTGGTGGGTTGCCGGAACATTTATGTGCAGGTGGTGCCCTTATTGGTGTGGTTGCATTTTCCAACAATTTTAGTGGGGTTTTGCCTGAGTGGATTGGGAATTGTCCTTCTCTAGCCACGGTTCAGCTTTATAATAACAAGTTTTCGGGTGAGGTTCCTTTGGGTTTGTGGACTATGAATAACCTTTCGTCCTTGATTTTGAGCAACAACTCTTTTTCTGGGCCTCTTCCGAGTCAAGTGTTTTGGAATATGACGAGGATTGAGATCGCCAACAACAACTTCTCGGGTGGGATATCTGTTGGGATTACTTCGGCCAAAAATCTGATGTTTCTTGATGCCAGAAACAACATGCTTTTGGGTGAAATTCCAAGGGAATTGACTCAACTTTCACGGCTTACTGCTCTCATGCTGGATGGTAACCAACTTTCGGGTGCACTTCCATCTGAGATTATTTCGTGGCAATCACTGAACATTTTGACACTATCACGAAACAAACTTTCTGGCCAGATTACCACGGCTATTACTGCTCTTCCCCGCCTGGCTTACCTGGACTTGTCTCAAAACGACATATCAGGTGAAATACCTCCTCAGTTTGATAGGTTGCGGTTTGTTTTCCTCAACTTGTCCTCCAACCGGCTATCTGGGAAAATCCCTGATGAGTTCAATAACCTCGCATTTGAAAATAGTTTCTTGAACAATCCTCATCTATGTGCTTACAATCCAAACGTCCACCTTGACAACTGCTTGACCAAAACCGCGTCAGCGGCACCACAGTCGAGCAATTCGTCTTCGAAATCACTGGCCCTGATTCTGGCTGCCACTGCGGTTGTGCTATCGGCAATAGCTTCCTTGCTCTTCTATATGTTGAAAACGCAATGGGGCAAAAAGCACTGCGGGCATAAAAATAAGGTTGCAACGTGGAGGCTCACTTCATTCCAGAAGCTTGATCTCACGGAAATAAACTTCCTCTCGAAATATGCTTATTCAACTAAGATTAACGAGAAAGTGGATGTTTATAGCTTTGGTGTTGTGCTCTTGGAGCTTGTTACGGGAAGGAAGCCTAATATAAGCGGCGAGCGTGCATGCAGCTTAGTTGAATGGGCGTGGGAGCATTTTAATGAAGCCAAGAGCCTTACTGATGCATTCGATGAGAATATCAAAGAACCACGTTATGCGCAAGAGATGGCTAATGTCTTCAAATTGGGCCTCCTTTGCACAAGCACCTTGCCGTCAACTAGACCTTCCACGAAAGAGATTTTGCAAGTACTTCGGTGTTGTCATTCAGGTTCTACACGTAGAAAAATGGGAAATGAATTTGATATCGCTCCTCTACTTGGTGACACAAGGTACGTTTGTAGTTACAAGGAGAGTAAGGCTGCAACCAATAACTCATCTTGGTGA


Promoter Sequence:
>Vu_10383::LG2:44383520-44385520(-)
TGCTAACAGGCTACGTTTGGGCAAAATTAAACAGCTCGTAAGTTAAATTATTGAATTAAAGTTGTGCCAGTACTAGCAGATGTGCCAAACAAAATGAAAGATGACAAAACAGATAACGTGTGGCAAAATAAAAGTAAAATGCTCTTTGAATGTGAAAGTTGTTCCTACCTTTAGTGTATGTTTCATTGGCACTGACTGTGTTAGCAAAAACATATTACAATTCCAGTTGGCAGGGAGGTTCTGTTGGGTATTCTGTTTAATGATTCTACAATCTGTGTACTACATTACAAGACTCTGATGAAAGTACTTGAAAGAGCTCAAATGGTGTAGTGTATGTTGCGTTATCTACATTTTGGTCAAATTCTGCTGTGTGTAAAATGCTTTTGAAGGGTGAAATACAAAATACAGGAATCTCAGTGGCGTGTTAGGATAGAAAGGAGGTTAAATACTAGTCATGAGTTATTTCCCATAAATATTGTGCAATCTTATTTTGGAAGTAATCATACTAATTGGAAAGGAATTAATTCAGTTCTGGCCCTATAGCTGACAAATGTATGTTGCAGCTGTGGAGAATTGTTTTCTAAAAGTGCAGTGGTGTTGCACAAAAAAGCAAGTGGCATTGTGAATCTTTTTGGTAAAATTGAAGCATTTGGGTGTGCTTTCGAAGAGAATATAGTTAGGAATTGAGGCTTTTGGGTTTGTTGATCTCACAAAGGTTATCTAAATTTCCTTATGTATGCAAGTCTTTAACTTAGATTCCTTTGTATATGGGTCTTCTTGTACCAATTGTTTCTACACTCCATACAATATGAGTAAAAGGGTAATGCATGTTTTGTTGAAATTAGTTCCAAAAAGGTATTAAAAGAATATTTGAGGTTGTTAATAAAAATTAGATATTATATAATCAAAACAACTTACTAATTTTTAACGTCTAGCAGATTGAGAATAAAAAAAAATCTGTGACTTAATTTCTAATTTATAAAGATGTTCAGTTTTCTTATTTTTAATTAATCTAAAACTTAGACTCATTTTTAATTATACAATTAAATATATTTTTGTCTCTTAAACTTTAACTTAAAATTGATATTCATCAAGTTTCAAATTTTGATACAGTTTAACCTTTAACTTTTAAAAATAAATAAATGTGATTCTCTTAATTTAATTACATTGTATTTTTGTGACATGTCAAAGTATGTTGTAAAATACTTTTTGAGTTAGTTTGTGTTAAATTGAAACATCATTTAATACGTAAAAAATTATGAATATTATTATATTAAAAAGATTATATTTATTTATTTTTAAAATTAAAAAAAAACGAATTTGAATTTTTGGTCTATATGATATTAGGTGTCCTTTGTCCCATATCGAATACATATTATTGGAAAGAAAAATGGTTGTTGGAGGTAGAAAGTATGAAGGTAGCGTGCTTCAGTCTAGTAACATAAAGATATTCACTTCAGCACTGTTGACTAGCTTTCTCTTTTCCATCATCCATCATGCGTTTGTGGCCCAATTCCCCTTTAGAGGCTCAAGAAACCAATGAAACAATTTAAACCAAATCCATTTGCCAGAGAATAAATATTGATGGTAGAAAATGGAACCAAAACAAGAAGAAAAAAAAAGAGAAAAGAAAAACAATGATGACATGTCCTTTCAATTGTGTAGTTTTAACTAACCAAAGATATCCACTGAAAAAAATCCAAGAAATGCCACACAATATCTTAATCAGTCGTGTTTGAACGAAACTCTAACCTAGCTAAACATCACTTTCCTCTTGCTTCCATCATTTTCAGCATCGCCCGTGTAATTAAAGTTCATTGCTAGTGCTTATATTATTTTTCCCGTGATTATTTTCAATATATAATAAACTCATTCATACACATCACAATACATCAAACACATAACAGAGTAAAGAGAGACAGAACAAAACCTCAAGCTCCTCATGTTCGAAATTTTGATGGTCACGTTTTCCCGGCAAAATCCCTAACTGAAACTGCGAA


Gene Sequence:
>Vu_10383(-)
ATGTCCAAAGTGCCCCTCTTTATTTCATTTCATTTCTTCCTGTTATTCAGCGTCGCTGTACCCTCTCGGGTAATTTCAGAAACTGAACAAACAATCCTACTCACTCTCAAACGTGAACTGGGAGACCCACCGTCGCTCCGATCATGGAAACCGTCGCCGTCTGCGCCGTGCGATTGGACGGAGATTGGATGCAACAGCGGCGGCGCCGTCACGAAGCTAGTCCTCTCCAGCAAGGGCATCACCACCACCAAGAGCCTCCCTTCCACAATCTGCAACCTCACACACCTACTCGAGCTTAACCTCTTCAACAACTTTATTGCCGGCGAGTTTCCGACAACCTTGTACGAATGCTCCAACCTCCGGTACCTCAACCTGTCGCAGAACTACCTCGCAGGAGCGATCCCCGCCGACGTGGACCGCCTCAAAACCCTCACTTTCCTCGACCTCACCGCCAACTCCTTCTCCGGAGAGATCCCGGCCGCGATCGGGAACCTGCTGGAACTGCAAACGCTGTATCTTTCCGCAAACAACTTCGAGGGAACCGTCCCCAGGGAAATCGGAAACTTGTTGAACCTCGAATTTTTGGGTTTGGGTTATAATCTTAAACTCGCGCCGTGGGAGTTCCCGTTGGAGTTTAGGAAATTAAGAAATTTGAGGTCTATGTATATGCCGCAGTGTAACTTGATCGGAGAGATTCCAGAATATTTCGGGAATATTTTCACGAACCTCGAACGGTTGGATTTGGGGAAGAACAAGATATCAGGGAGCATTCCGAGGAATTTGTTCTCGCTGAGTAAGTTGAGGTTCTTGTACCTGTTCAGTAACAGATTGTCGGGTGCGATTCCTAGTGATACGATGCAGTGTTTGGAATTAATCGACCTTGATTTCGCGAAGAATAATTTGACGGGTTCCATACCGCCAGAGTTTGGAAAATTAAAGAACTTGAGTACCTTGCACTTGTACGAAAATCACTTAGTCGGTGAGATTCCCGTAAGTTTAAGCCAAATTCCTAATCTCATCTATTTCAGGGTTTTTAGCAATAACTTGAGTGGAACACTGCCTCCAGAACTAGGCTTGCATTCCAAGCTTACAGTGTTTGAGGTTTCTGAGAACCAGCTCAGTGGTGGGTTGCCGGAACATTTATGTGCAGGTGGTGCCCTTATTGGTGTGGTTGCATTTTCCAACAATTTTAGTGGGGTTTTGCCTGAGTGGATTGGGAATTGTCCTTCTCTAGCCACGGTTCAGCTTTATAATAACAAGTTTTCGGGTGAGGTTCCTTTGGGTTTGTGGACTATGAATAACCTTTCGTCCTTGATTTTGAGCAACAACTCTTTTTCTGGGCCTCTTCCGAGTCAAGTGTTTTGGAATATGACGAGGATTGAGATCGCCAACAACAACTTCTCGGGTGGGATATCTGTTGGGATTACTTCGGCCAAAAATCTGATGTTTCTTGATGCCAGAAACAACATGCTTTTGGGTGAAATTCCAAGGGAATTGACTCAACTTTCACGGCTTACTGCTCTCATGCTGGATGGTAACCAACTTTCGGGTGCACTTCCATCTGAGATTATTTCGTGGCAATCACTGAACATTTTGACACTATCACGAAACAAACTTTCTGGCCAGATTACCACGGCTATTACTGCTCTTCCCCGCCTGGCTTACCTGGACTTGTCTCAAAACGACATATCAGGTGAAATACCTCCTCAGTTTGATAGGTTGCGGTTTGTTTTCCTCAACTTGTCCTCCAACCGGCTATCTGGGAAAATCCCTGATGAGTTCAATAACCTCGCATTTGAAAATAGTTTCTTGAACAATCCTCATCTATGTGCTTACAATCCAAACGTCCACCTTGACAACTGCTTGACCAAAACCGCGTCAGCGGCACCACAGTCGAGCAATTCGTCTTCGAAATCACTGGCCCTGATTCTGGCTGCCACTGCGGTTGTGCTATCGGCAATAGCTTCCTTGCTCTTCTATATGTTGAAAACGCAATGGGGCAAAAAGCACTGCGGGCATAAAAATAAGGTTGCAACGTGGAGGCTCACTTCATTCCAGAAGCTTGATCTCACGGAAATAAACTTCCTCTCGAGTTTGACAGACAATAACCTCATAGGGAGTGGAGGGTTTGGGAAAGTTTACCGGATTGCTTCAAATCGTCCAGGTGAGTATGTTGCGGTGAAGCGGATCTGGAATCGCGAGGATGTGGATGACAAGTTGGAGAAAGAGTTCCAGGCTGAGGTTGAGATCCTGGGCAACATTCGGCACTCGAATATAGTAAAGCTTTTGTGCTGCTATGCAAGTGAGAACTCCAAACTTCTTGTTTATGAATACATGGAAAATCAGAGCCTGGATAAATGGCTTCATGCAGAGGAAAAAACATCGCCTCCTGGGTTGAGTTGGCCAACGAGGTTGAATATTGCCATTGGGGCTGCACAAGGCCTGTGTTACATGCACCATGAATGCTCACCCCCCGTCATCCACCGAGATGTCAAATCTAGCAATATACTGTTGGACTCAGAGTTCAGAGCTAAAATAGCAGATTTTGGGCTCGCCAAGATGTTGGCAAAGCCCGGTGAACTAAACACCATGTCTGCACTAGCAGGCTCTTTTGGCTACATTCCACCAGGTAAATGATGCTAAATTGCCATCTACAGAAGTTTTTATATTGATACTGAAGTAAGCTGGTCTGATAATGTGCTTCACTTGCATTGCAGAATATGCTTATTCAACTAAGATTAACGAGAAAGTGGATGTTTATAGCTTTGGTGTTGTGCTCTTGGAGCTTGTTACGGGAAGGAAGCCTAATATAAGCGGCGAGCGTGCATGCAGCTTAGTTGAATGGGCGTGGGAGCATTTTAATGAAGCCAAGAGCCTTACTGATGCATTCGATGAGAATATCAAAGAACCACGTTATGCGCAAGAGATGGCTAATGTCTTCAAATTGGGCCTCCTTTGCACAAGCACCTTGCCGTCAACTAGACCTTCCACGAAAGAGATTTTGCAAGTACTTCGGTGTTGTCATTCAGGTTCTACACGTAGAAAAATGGGAAATGAATTTGATATCGCTCCTCTACTTGGTGACACAAGGTACGTTTGTAGTTACAAGGAGAGTAAGGCTGCAACCAATAACTCATCTTGGTGA