Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_10318 LG2 43645476 43647270 PREDICTED: zinc-finger homeodomain protein 2-like
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/A 43645815 3_prime_UTR_variant
C/T 43645889 missense_variant p.Val298Ile
A/G 43645895 missense_variant p.Ser296Pro
G/A 43646013 intron_variant
C/A 43646044 intron_variant
A/G 43646137 intron_variant
G/A 43646153 intron_variant
C/T 43646159 intron_variant
T/C 43646211 intron_variant
A/T 43646217 intron_variant
G/A 43646279 synonymous_variant p.His265His
C/T 43646368 missense_variant p.Ala236Thr
C/A 43646393 synonymous_variant p.Thr227Thr
T/A 43646413 missense_variant p.Arg221Trp
A/G 43646504 synonymous_variant p.Ser190Ser
G/A 43646520 missense_variant p.Ser185Leu
G/A 43646786 synonymous_variant p.Asp96Asp
G/C 43646988 missense_variant p.Ala29Gly
G/T 43646991 missense_variant p.Ala28Glu
C/G 43647023 missense_variant p.Glu17Asp
C/A 43647064 missense_variant p.Asp4Tyr
C/T 43647211 5_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_10318.1
MEFDDHEEQEEEEEEEEEEEEEMGFSVAAPGYDSFGNAAPRSKMSAAEGVPATVNSGRKGGSAGTSRYRECQKNHAVSIGGHAVDGCCEFLAAGEDGTLEAVICAACNCHRNFHRKEIDGEISSYQLRSQPQPQPQPLHPQYHHQFSPYYHRGPPPSSAGYLHPHHLLTTPVSQHRPLALPPLASGGVFSREEEDMSNPSSSGGGGGGFGGGGSGSGTKKRFRTKFTQEQKDKMLAFAEKLGWRIQKHDEAAVEQFCAETCVKRHVLKVWMHNNKHTLANSEQRSAGNGSNHLNSSTVIENSELS*


CDS Sequence:
>Vu_10318.1
ATGGAATTTGACGACCACGAAGAGCAGGAGGAGGAAGAAGAAGAGGAAGAGGAGGAGGAAGAGGAAATGGGATTCTCAGTGGCGGCGCCGGGTTACGATTCCTTCGGAAACGCGGCGCCCAGGTCTAAAATGAGCGCAGCTGAGGGAGTTCCGGCCACCGTTAACTCCGGTCGCAAAGGCGGCTCCGCGGGGACGAGCAGATACAGAGAATGTCAGAAGAATCATGCCGTCAGCATCGGCGGTCACGCCGTCGATGGCTGCTGCGAGTTCTTGGCCGCAGGAGAGGACGGCACGCTGGAGGCCGTAATTTGCGCGGCCTGTAATTGCCACCGCAATTTTCACCGCAAGGAGATCGACGGCGAAATCAGCTCTTACCAACTGCGCTCGCAGCCGCAGCCCCAGCCGCAACCGCTGCATCCTCAGTATCACCACCAATTCTCCCCTTACTACCACCGCGGGCCACCACCTTCCTCCGCGGGATACCTCCACCCCCACCACCTGTTAACCACTCCGGTGTCGCAGCATCGGCCTTTGGCTCTACCACCGCTGGCTTCGGGAGGAGTGTTCAGTAGAGAAGAGGAGGACATGTCAAACCCCAGCTCGAGCGGCGGCGGAGGTGGCGGTTTTGGTGGTGGTGGTAGCGGCAGTGGAACGAAGAAGAGGTTTAGGACAAAATTCACGCAGGAGCAGAAGGATAAGATGCTGGCATTTGCGGAGAAGCTAGGGTGGAGAATTCAGAAGCACGACGAAGCTGCCGTGGAACAATTCTGCGCTGAAACTTGTGTGAAGAGACACGTGCTGAAGGTCTGGATGCACAATAACAAACACACTCTAGCTAATTCAGAGCAACGTTCAGCTGGGAATGGATCGAATCACTTGAACAGCTCCACCGTAATTGAGAATTCTGAACTCTCCTAA


Promoter Sequence:
>Vu_10318::LG2:43647270-43649270(-)
TATCTATGTAAAAGGGAAATCTTGAATTTTTGTAGGTGAGAATAATTAGTGATGAAAGATGTCACATATTTCGATATGAAATGAATAGAGTCATAGGATATCTACTATTATATTGTTGACCCCATTCTGTCAAGATACAGTTAGGTGTGTGAAATAAAGTGCTAGGTTTCTGTGAGGCTTCTTCTCTAACTAGCTCACACATTTACCATATCTTAGCAATTAAATAATTTCAAGAACCACTCTTGCATGATCGAACTCTATCTAAAAACCTAAATTCAGGTTAACATTCACGTGCATCGCCATAGATTCCAGCTTTCCACAAGTTACAGCTGAAACTCCTACAAATTCATTTCCAATTATTTGCAATTTTTTAACTATACAATGCCTAATTAATCTAAAAATTCCAACATATTTGAAGAAATATGCATGTGAGGGAAGAAGAAAATGGTAATTTGTTAGATAAAGGTTTATGTTTATTCATTAAGTTGTATTGTAGGGGTGGCATGCATGCATTTGGCTTTCGTAACAGTATAAAATTAATAGTTACAACAATAATAATTATTTACTATTATAATAATACTTGCAATATAGTGATTGTGTCAACAAAAGGATATAGTATGCAATATATTAGGTTATATATATTGAATTTCGATAAACATGTATTCCAACTAGTATCCTGAAGATAATATCTTTAGAGTCAATAATTGTATTTAGGATATTATTATTTAGAGCTTAAAAATTATTACAACTTTGACTTTAAAAAATCTAAAAAAAATTAAAATGCTTTTTTTATCTCAATTTCCAAAGAAGATAAGACTATTAGGTTTATCAAAAATAAATATACATATTGAAATGAATCGATAAACGTGTATTTATTGTAAAATTACACGTGTTATGTGGTGAATGGTGGTTCAATAAAACCACTAATCAAACTTTTTTAACCAAAAATGTCAAACAAATATACATTTATATTAACTCTCACGAAACCTAATAAGCTCACATGTTCATCGATAATTGGAACAGTGATCAGTAACAAAAGGAAGAAAGAAATTATATAACATGAGATTACTATGAGAATTTTTTTATGACGCCTAGTTCTATTATCTATTTTACAACCGAACTCAGTGTAAAATGATAGTAATAAATTTAAGGAATACAGATATGAATTAAAAATAATAATTTAATATTTAGCAGAATAGGAGAAGAGAAGATAGAAAATGGTGATAGATGAGTGATGTCATGTGATGTCGGAAGAGGAGGGCACGTAGGCAGCTCCCATGAATGCCGACAGATTAATTTTTCCGATGACAGGTCGGTGTCCTAAGTTTATGGGGCCTCTCATCCTTTCTCTTCAACTATAATTATTCTTCATGCACCACTCCATACTTTTTCCACTCTTCTATTCCCATTAAACTCTTACTATGTAATACTGGGTGAGATTCACCATCTTAATATATGGATTTAAAATAAAAAAAAAACTAAAAAAAAAAGATTTCATATAAAATATTATTTCTAGTAAAAATTAGTATTTTCAATGTACCTCTTTGAAAAACGGGTAGGTCCCATGTGTCTTTTTACATGTCCAATAAATCCAAAATATATGATGTATTATTTTCTTTGTTCTGTTATGATTGTAAAAATATTGGTGTTACTGAAAAAAAGTATATTGGAAGAATGTATATGGAAAAAGTAAAAGATAAAAAAAGGGGGTTAAAGTAAAAGTGAATGTGTGTGTGAAGATGATAGATGCAGATGTTAATGTAATGGCAAGTATTTGAAAGGCTTTCGAGAGTGAGACACCTCTTTTTCTGCAGACGGGTCATTGATGACCACATCCTCTGCTCCTCTCTTATCTTCAACTGCGACTTCAAACAAATTAATATTACTATCTTAATATAAAATCTCTTAAATTCAATTAATTAATTAATAATTAGTATTTATTAGGAGTAATATAAAATGATAAAAGAAAAGCAGGAGTATCTTACTTATACTTATTATCC


Gene Sequence:
>Vu_10318(-)
ATTGCGGTGGGTTATGACTTCATCATTCAATTCAATTGACTCGGCTCTTCCTCTCTCTCGGCTACAATACTTGATTGTAGATCTTTCTCTGCTACTCCCATCTCCAGCACACACCAAACATCCCAAATAAAACACAAAAATTTATTTATTTATTAGTAAATTTATTTTATTCTGCTTTTACGAAAGTGGAGAGCGATATGGAATTTGACGACCACGAAGAGCAGGAGGAGGAAGAAGAAGAGGAAGAGGAGGAGGAAGAGGAAATGGGATTCTCAGTGGCGGCGCCGGGTTACGATTCCTTCGGAAACGCGGCGCCCAGGTCTAAAATGAGCGCAGCTGAGGGAGTTCCGGCCACCGTTAACTCCGGTCGCAAAGGCGGCTCCGCGGGGACGAGCAGATACAGAGAATGTCAGAAGAATCATGCCGTCAGCATCGGCGGTCACGCCGTCGATGGCTGCTGCGAGTTCTTGGCCGCAGGAGAGGACGGCACGCTGGAGGCCGTAATTTGCGCGGCCTGTAATTGCCACCGCAATTTTCACCGCAAGGAGATCGACGGCGAAATCAGCTCTTACCAACTGCGCTCGCAGCCGCAGCCCCAGCCGCAACCGCTGCATCCTCAGTATCACCACCAATTCTCCCCTTACTACCACCGCGGGCCACCACCTTCCTCCGCGGGATACCTCCACCCCCACCACCTGTTAACCACTCCGGTGTCGCAGCATCGGCCTTTGGCTCTACCACCGCTGGCTTCGGGAGGAGTGTTCAGTAGAGAAGAGGAGGACATGTCAAACCCCAGCTCGAGCGGCGGCGGAGGTGGCGGTTTTGGTGGTGGTGGTAGCGGCAGTGGAACGAAGAAGAGGTTTAGGACAAAATTCACGCAGGAGCAGAAGGATAAGATGCTGGCATTTGCGGAGAAGCTAGGGTGGAGAATTCAGAAGCACGACGAAGCTGCCGTGGAACAATTCTGCGCTGAAACTTGTGTGAAGAGACACGTGCTGAAGGTCTGGATGCACAATAACAAACACACTCTAGGTAAGAAACCCTAATTTTCAGTCTTCAATTTCTCTCTTTCAGTTTTTAGGCCCATATCCTAGATTTTAGTCTGAATAGAGGGAAGCAAAGTGGTGTTATTATTTAATTTGTATTCTAAAATAAGTTTAGCTAATGGAGATCTGGTTAGGGTTAATTCACACTCATTCTTCCCCCAACAAGCTTATTTTTTGTTTGATATATTATATATATATATATATATATACACACACATGATGTGACGATGATGAGATTGTGGTTGTTGGTGATTTGCGGTTGTTATGTGTGTCTTCTAGCTAATTCAGAGCAACGTTCAGCTGGGAATGGATCGAATCACTTGAACAGCTCCACCGTAATTGAGAATTCTGAACTCTCCTAAGGGAGATTAACGAAATAAAGACAAAGAACTAAAGTTGGAAGTTGATGGAAGGGTTTGCAATTGTTGATGATATCAGAATCAGAATGATCAGTGATGGTGAGGTAGGGGAGTATCGAACGGAAGTATGGGGATGAGCGCAGAGAATAATTTGCAACACTGGTTGTATTTATCGTGCGTGGAATGCAAGTGCAAAGCTGTTTTAAGTTACTACTTTGCTATGTTTCTTCACATTTGTCGTCTTCTTTTCCTGTTTTTCCTCCTAACACCACCCTACCTTTATTCTCCTTTCTCTCTCATATTAATGTCTCTTCTTCTTTCTTTCTTCATTGCTGGACCTCAAACTTCACAAACCATTTAATAATCACTCTAACCTTCTTATTCAACCTT