Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_10312 LG2 43581904 43582101 MADS-box protein SVP isoform E
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   positive regulation of transcription, DNA-templated, maintenance of floral meristem identity, positive regulation of transcription, DNA-templated, maintenance of inflorescence meristem identity, positive regulation of vernalization response, positive regulation of transcription by RNA polymerase II, regulation of transcription by RNA polymerase II, regulation of transcription by RNA polymerase II, floral whorl development, maintenance of inflorescence meristem identity, positive regulation of vernalization response, regulation of transcription by RNA polymerase II, positive regulation of transcription by RNA polymerase II, positive regulation of transcription by RNA polymerase II, regulation of timing of transition from vegetative to reproductive phase, floral whorl development, floral meristem determinacy, positive regulation of transcription, DNA-templated, response to gibberellin, regulation of transcription by RNA polymerase II, response to gibberellin, positive regulation of transcription, DNA-templated, positive regulation of transcription by RNA polymerase II, floral meristem determinacy, floral whorl development, floral meristem determinacy
Cellular Component   located in   nucleus, nucleus, nucleus, cytoplasm
Molecular Function   enables   RNA polymerase II cis-regulatory region sequence-specific DNA binding, DNA-binding transcription factor activity, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, DNA-binding transcription factor activity, RNA polymerase II-specific, protein binding, protein binding, protein heterodimerization activity, RNA polymerase II cis-regulatory region sequence-specific DNA binding, protein binding, protein binding, protein binding, sequence-specific DNA binding, protein binding, protein binding, protein homodimerization activity, DNA-binding transcription factor activity, protein binding
No SNPs found.

Sequence Details:

Protein Sequence:
>Vu_10312.1
MTRAKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDADVGLIVFSSTGKLFDYSSSRYIRK*


CDS Sequence:
>Vu_10312.1
ATGACGAGGGCGAAGATAAAGATAAAGAAAATCGACAACATAACCGCTAGGCAAGTAACATTTTCTAAGAGAAGGCGAGGGTTGTTCAAGAAAGCTGAAGAGCTTTCTGTTCTGTGTGATGCTGATGTTGGTCTCATAGTTTTCTCATCTACCGGGAAGCTCTTTGATTATAGCAGTTCCAGGTACATACGGAAATAA


Promoter Sequence:
>Vu_10312::LG2:43579904-43581904(+)
TTATAATTTTAGTCTTTTTATATACATTTTTACAATTACATATAACATTAATAAATAATATTTTATATTACTTTAATACCTAGGGATATTTTGGTAATCTTTAATTTTTACCAATAAAACAAATTTTTTAAATCTATCACATTAATCAAATCATCTACCCAAATCATATCTTCCAAATCACTCTAAGAGAACAAAGTCAGAATGAGGGTAGTTTTAAAGTTATTTTAATTAAAGCATTACAATTATATATTTATACACAAATAGTTCTAATTAAATGAAAATAACAATTTACATCATGTGCGGGGACCAAGGCACGTTATGACGTGGGGCCTATGCCCAATGACTTTTCAGTTCATTTTTTATGCACATGTTATTTATAAATAACGTTTTTATTTATGAGGTAGATAATAATATTATGCGCTATTTTCATAAAAATGGTTTTTTTTAATATTGATTATAAAATACTTACATTGTTTTTATTTTTTAGTAGTAATTTTTTCTTATATCGATATATTTTCTTATCCTTTTAAACAAAATATTTGAATATCATATATTTATTTTAATATTATTTTTATCATCTATTTTAAAGACTGTAAAAATTGTACTTACAATTTTTATTAGCTTTTTTATTTTTACTTATTTGATTATAATTAAAAAAATATTTAAACTAAGTGAGCTTAATTACAAAAACTGATAAGAAACCGATGGTTTAATTTTTGAAATATTTTCTTTTCACTTCCATCACTTGTTTATTTATTTTTTTCCCCTCTTAATTTTCTTTTATTTGAGAATCCAACATAATTTTTATTTCAATTCAAACATAATATAAATAATTATCCGAAAAACAAATGAAATATTGAGTTGTACTAATAATTTATCAAACTTTAGTTTTTGGTACGTAGTCACGTTTATATTAATATTAATATTATACTGACATTTAGCTATCTGAACAATAATTTTCATCAATTATTATTTGATGAATAAGACAACTCATTCAATTAAGTACATTTTTAACTTTTCTAATAAATTCTTTTATTGCAGATACTATTCATGGATTTCTTCATGATATATGAAATCGTCATTCAATTGGATCTTTAAAAATATTAACTCCAAAGTATTTTCTATTAATATTTTAATAAGCCATTAGTATAATTATTTACATATATATATATATATATATATATATATTTATATATATCTAAAAATTTATTATAGTTTGTAGATATATATATACTAACTTATTGTGCTTAAAATAAACAAACGTGTAAAAGACTGAACTGAAATTCCTTTCACATCGATCTCTGAATAGCCAATGGCGTTCTGAAATATCTATATCCGATTTTGACTACTAGTCAACTTCATTATTAATTGTTTAAAACGAAATTGAGGTAAGAAAAACAAAATTAAAAAAAGAAGGGATAAGATAAATAACTAATTAGTAATGAAAATAGAAAGAGCTGAGCATATTTAGCTATCTATAAAGGGAAGGGTTTCTTTCCTTTCTTGATACGAAGCCAGCATCCCAATCAAGGTTATCTCTCTTTCTCTCTCTTCTGTGTCTCTCCCTGTGTTACTGACTCCTAAAAGTTCTCCTTCTCTTCACACTTTCTTTCTTTGTTACTAAATCTGATTGGAGCAACATTTTCTTAGTTTTTCCCCTTTCAGTACAAATCAAAAATAGTGCTACATACACTTCTCCACTAGGTTCAAGCATATCAATCAACCAGTTGAAATCAAAACCCACCAATCAAAACCTCTCAAATCTTGCATGTTCGCTAACTTCCCTTTGGCTGGTAGGTTCCTTTTTCTGTTCCCGTTATCCAGATCTGAAACTGGGTGTGCCTTTTATTAGGGTTTTTTTTTCTTGTTTTTCCAAGTTGTGTTCATCATTCCATATCCTTGTATATGTGTCATGTACAACTATTTTTGTGTTTTGAGACAAGTGTGAGAGTGTGTACTTTAAAATAGTTCTTCTAATTCAGTTTTGTGCAGCTGAAAAA


Gene Sequence:
>Vu_10312(+)
ATGACGAGGGCGAAGATAAAGATAAAGAAAATCGACAACATAACCGCTAGGCAAGTAACATTTTCTAAGAGAAGGCGAGGGTTGTTCAAGAAAGCTGAAGAGCTTTCTGTTCTGTGTGATGCTGATGTTGGTCTCATAGTTTTCTCATCTACCGGGAAGCTCTTTGATTATAGCAGTTCCAGGTACATACGGAAATAA