Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_10272 LG2 43121546 43122648 PREDICTED: transcription factor bHLH94-like
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/T 43121840 synonymous_variant p.Ala245Ala
G/A 43121841 missense_variant p.Ala245Val
A/T 43121871 missense_variant p.Val235Asp
G/A 43121939 synonymous_variant p.Tyr212Tyr
T/C 43122364 synonymous_variant p.Thr95Thr
A/G 43122386 missense_variant p.Met88Thr
A/G 43122453 synonymous_variant p.Leu66Leu
A/G 43122559 synonymous_variant p.Asp30Asp
G/A 43122604 synonymous_variant p.Tyr15Tyr

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_10272.1
MALEAVVFPQDPFPYACKDYFYSLVGAAPDYGFQAAEEEKLLLGIINNNIEDNLYTTWDSSSTSVLQNVKEQWDSHSSPEACTVDESMIPPLSSTAEATATTTTRRKRRRTKSAKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPSSYVQRGDQASIIGGAINFVKELEQVLQSMEGEKRRKQGEEENVGLNGWTTPFAEFFTFPQYTTRGNQKQEQKQWAVADIEVTMVDSHANLKILAKKQPSHLMKIVLGLQTLRLTILHLNVTTLHHMVLYSISVKVEEGCELNTVDEIAAAVNQLLGTIQEVAFS*


CDS Sequence:
>Vu_10272.1
ATGGCGCTAGAGGCTGTGGTATTTCCGCAAGATCCGTTTCCGTACGCTTGCAAGGATTATTTTTACTCCTTAGTAGGAGCAGCACCCGATTACGGTTTTCAAGCGGCGGAAGAAGAGAAACTCCTCTTAGGAATCATCAACAACAACATAGAAGACAACCTATACACAACCTGGGATTCTTCTTCTACCTCGGTCTTGCAAAATGTGAAGGAACAATGGGATTCTCACTCCTCCCCCGAAGCCTGCACTGTTGATGAATCCATGATCCCACCTCTTTCTTCCACAGCTGAAGCCACCGCCACAACCACGACTCGGCGGAAACGGCGCCGTACGAAGAGCGCGAAGAACAAAGAGGAAATCGAAAACCAGAGGATGACCCACATTGCAGTTGAACGGAACCGCAGAAAGCAGATGAACGAGTACTTAGCCGTACTCCGATCCTTGATGCCCTCCTCTTACGTTCAGAGGGGTGACCAAGCGTCTATCATCGGAGGCGCCATTAACTTCGTGAAGGAGTTGGAGCAGGTTTTGCAGTCAATGGAGGGTGAAAAGAGACGGAAGCAGGGTGAAGAAGAGAATGTTGGGTTGAATGGGTGGACGACACCCTTTGCCGAGTTCTTCACGTTTCCTCAGTACACGACACGTGGCAATCAGAAGCAGGAACAGAAACAGTGGGCCGTAGCAGACATTGAAGTCACCATGGTCGATAGTCATGCCAATCTAAAGATTCTCGCGAAGAAACAACCCTCCCATCTCATGAAGATCGTTCTCGGCCTTCAAACTCTCAGACTCACCATTCTCCACCTCAATGTCACCACTCTCCACCACATGGTCCTTTACTCCATCAGCGTTAAGGTAGAGGAGGGTTGCGAGCTGAACACGGTGGATGAAATTGCGGCGGCGGTGAATCAACTGTTAGGCACAATCCAAGAAGTTGCATTCAGCTGA


Promoter Sequence:
>Vu_10272::LG2:43122648-43124648(-)
GAAATCTTCTACAGAGACCAAATTTTTGACACAAGTGTAAAATTTCAAAATAAATAACTTTAAACAAATGTTTAGGTTTCCATTATTTTTATTTTGGCTTCGGTTATCCAAAAAGTTAAATAAAAAATATCACTGTGACGTCCCAAAATATATAGAAAAAGCATACATATAATCAATACGTCATAATGCATAATATAGGAAAACAGTCAAAAATAATTAAGGATTACAGTCATCCTCAAAATAACTTCAAAAATTAAACTTCAATTCTAAAAAGATCTAAACTGTAAACTTAAAGAGAAACAGAAAATAAAAAAAGTTCTAAAAATAGTACAGAAATAAAATATTTTAAAGTAATGAAATTCGTTTAATAATTCTATTTTATACTTTAATATTAAAATAATCAAATTTTATTATTTTAAATATATTGGTAATCTTTACAAATATAAACTAACAACATTTCATATTCAGTTTTTGCCTGTTTACCCGTCTTTACTGTTTTGAATTTAATCTAATGATACTTGAAGTTTTAACTTTAGTGGATACAATAATAATAATAATAATATAAAATAATTTGATGAGTTTAACAAAAGAGGTAATAATTTTTGTTGATAGTTTTTGCTTATAAGAAAAGAGAAATGTGGTGTAAAGAAGTCTGACATAGCATGGTTTTGTTACGTGCAGGTTGGGACGTCTAAATCCTGAGAATGGAACTTTACATATTTACTGTGTAAAGATGAAATATTAATATATAGAATGGTGAAAAAAAGGGCACAGTATGGTTGGAAAAGGAAAGAGAGAAGAGAATGGTGTGTGTTGTGGATGGAAGATGATTACAGAATGGCCCTTTCTGTTGTGTGGTCACATGGATTCCTCTGAACTCTGGACCTTGTCCTATTCCTCACCTACTCTCTTTCTTCTCTTCTCTTTATGCTTCTTTCTCCCAATCTTTTCCTATTCTTTCTCTTTTTCATGTCCCAATACCCGACCACATTATTACCAAATCAAACTACACACAATTTTATACTCTACTCCTTTTTTTTTAATTCTAAAACTTATCGGACAAAATTAAGTAAAACTCTTCTATGTAACTCCACAACTCCAAAAGGACCACTTTCTCCCTCTGTTTCACCAAATCTGTCCATGTCCACCGAGGAGATGACCGTCCTTGCCTCTTTGCAACAACCATTTTTTCTTGTTTCGCAGATGTCTTTTGATTATTGGATTGGATTGTATAATCATACATTCAAGCACCGGCTAGCTACCATATGCTTTCATTTTTTTTTCACGTACTTGCAAATTTAATAATATGGAACTGCGGATAAGACCACGTTATTCACGAAAGAGATTGAAGTTTTATATTCTCTATGATATTCTAACGCAATTTCCCTCGCAGAAATTAGAGGAAACCAAAAATTATATATATAGCGCAAGTGAATGACACAAGACAGCATAAAATGTTTGAAAAAACATAGCACATTTCGATACAGATCTGACACAGGGGAAGCATTTTAATAAGTTTGTGAGGTGGTTATTGTTATTATAATTATGACGTAGTTATTAATAATACATGGGCATTATGATTGGAAATAAAGGATTAAAGAAAGCGCGAAGAGAATCTGTGCGTGTGTGTAGCTAATTGAGTTTACGCGATCAAGGAAGTGGTCTAGAACAGCAATGAAACCTCACGTGCAGGGTGCTGTAGCTTTTTGTTTCTTTGAATAATCATGTGAAAAGGTAACAAGCTTTCTCGGTAATGCGTTGATAAAAGGGGGAGTTTGTTTGGTCCATTGGTAACGTAGTGTTTCTTCTTCTTCTTCCACCTCAACTTTCTTCTTCTTCTTCTTCTCTCCATATCTCTTTTCCTCTTTCCACTCTCAACCTTCTCTCTCTCTCTCTATATATATATATATATCATCTCCCACAAAAAAAGTACTGTGTTCGTGACTTCGTGCTCCATTGCTAGCTACAGGGAGAAGTTTTGTGAGAAAAGCTCACAAATA


Gene Sequence:
>Vu_10272(-)
ATGGCGCTAGAGGCTGTGGTATTTCCGCAAGATCCGTTTCCGTACGCTTGCAAGGATTATTTTTACTCCTTAGTAGGAGCAGCACCCGATTACGGTTTTCAAGCGGCGGAAGAAGAGAAACTCCTCTTAGGAATCATCAACAACAACATAGAAGACAACCTATACACAACCTGGGATTCTTCTTCTACCTCGGTCTTGCAAAATGTGAAGGAACAATGGGATTCTCACTCCTCCCCCGAAGCCTGCACTGTTGATGAATCCATGATCCCACCTCTTTCTTCCACAGCTGAAGCCACCGCCACAACCACGACTCGGCGGAAACGGCGCCGTACGAAGAGCGCGAAGAACAAAGAGGAAATCGAAAACCAGAGGATGACCCACATTGCAGTTGAACGGAACCGCAGAAAGCAGATGAACGAGTACTTAGCCGTACTCCGATCCTTGATGCCCTCCTCTTACGTTCAGAGGGTAAGTTGATTTGTTATTGCGACAATGATGATTAGTTAGTTAAGAATGGCCTAACCGTGTGGTTACTTAAACAGGGTGACCAAGCGTCTATCATCGGAGGCGCCATTAACTTCGTGAAGGAGTTGGAGCAGGTTTTGCAGTCAATGGAGGGTGAAAAGAGACGGAAGCAGGGTGAAGAAGAGAATGTTGGGTTGAATGGGTGGACGACACCCTTTGCCGAGTTCTTCACGTTTCCTCAGTACACGACACGTGGCAATCAGAAGCAGGAACAGAAACAGTGGGCCGTAGCAGACATTGAAGTCACCATGGTCGATAGTCATGCCAATCTAAAGATTCTCGCGAAGAAACAACCCTCCCATCTCATGAAGATCGTTCTCGGCCTTCAAACTCTCAGACTCACCATTCTCCACCTCAATGTCACCACTCTCCACCACATGGTCCTTTACTCCATCAGCGTTAAGGTTCTTCCTCAACCAACACCCTTTTTCTTTTTTTTTCTTTCTTCCATTTCTTATTCTTCCGTGTTTGGATTTATGGAGCAGGTAGAGGAGGGTTGCGAGCTGAACACGGTGGATGAAATTGCGGCGGCGGTGAATCAACTGTTAGGCACAATCCAAGAAGTTGCATTCAGCTGA