Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_10165 LG2 41738945 41741949 PREDICTED: auxin response factor 17
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/G 41739097 synonymous_variant p.Ser51Ser
G/C 41739224 missense_variant p.Gly94Arg
C/T 41739246 missense_variant p.Ser101Phe
G/T,* 41739266 missense_variant p.Ala108Ser
G/T 41739279 missense_variant p.Gly112Val
C/A 41739433 synonymous_variant p.Ala163Ala
G/T 41739547 synonymous_variant p.Thr201Thr
G/A 41739694 synonymous_variant p.Glu250Glu
C/G 41739697 missense_variant p.Asp251Glu
A/*,G 41739703 synonymous_variant p.Glu253Glu
A/*,G 41739706 synonymous_variant p.Glu254Glu
T/A 41739741 missense_variant p.Phe266Tyr
A/T 41740203 intron_variant
G/A 41740209 intron_variant
T/A 41740245 intron_variant
T/A 41740325 intron_variant
G/A 41740331 intron_variant
A/T 41740337 intron_variant
T/C 41740601 intron_variant
T/C 41740607 intron_variant
G/A 41740614 intron_variant
T/G 41740665 intron_variant
T/G 41740686 intron_variant
A/T 41740687 intron_variant
C/G 41740693 intron_variant
A/G 41740809 intron_variant
A/C 41740842 intron_variant
T/A 41741032 intron_variant
A/T 41741056 intron_variant
C/T 41741515 synonymous_variant p.Leu413Leu
G/T 41741529 missense_variant p.Glu417Asp

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_10165.1
MPRQSPPSQPQQPSELEPAIWQACAGPSVEIPKPNSMVYYFPQGHFDQASSAPKNLSSHLLAKPFIICSVVSVNFLADPLTDEVFTKMVLQPVGNNLPVESFHTPAFAPPAGVPPAVAPPPNDDNEVVSFAKILTPSDANNGGGFSVPRFCADSVFPKLNFGADPPVQNLSVTDVHGFTWEFRHIYRGTPRRHLLTTGWSTFVNNKKLVAGDSVLFMKHAQRLFVGIRRATRFSSERANCPKLMLIEEEEDEEEDEEDEEKVKRVFKRDGKGKLTAKVVVEAAELAARQMQFEVVYYPKAGWSEFVVKIEVVDAAMRIAWSEGMRVKMSVETDDSSRMTWFQGTVSAVSSHNNGQWCSSPWRMLQVTWDEPEGPRNGKWVSPWQVELVSPPPVLHPAFPPAKRLRTANGYGVLTNGEGGTFSVAGVTNSAMVQLNPAYLGYSTFPAGMQGARHDVFSASSFPSYPRDLSHVCIDNSFGNNTFSRQKNLPTELHVGGNSQSDELSPDSSFHSCVTDTLGNTNNSIKPAPDSFQLFGAVIRKEQPVQNDLTGDKAPGR*


CDS Sequence:
>Vu_10165.1
ATGCCACGACAATCGCCACCGTCACAGCCGCAGCAGCCCAGCGAACTGGAGCCGGCCATATGGCAAGCCTGTGCTGGACCGTCTGTGGAAATCCCGAAGCCAAATTCTATGGTTTACTACTTTCCTCAGGGACACTTTGATCAAGCGTCTTCAGCACCCAAGAATCTCTCCAGTCACCTTCTTGCCAAACCCTTCATTATCTGCAGTGTTGTCTCGGTTAATTTTCTTGCCGATCCTCTTACCGACGAGGTTTTCACCAAGATGGTTCTCCAACCTGTTGGTAACAACCTTCCTGTGGAATCCTTCCATACTCCTGCCTTTGCTCCTCCTGCTGGTGTTCCTCCTGCTGTTGCTCCTCCTCCAAATGACGACAACGAGGTCGTTTCGTTCGCAAAGATTCTCACGCCGTCTGATGCCAATAACGGCGGCGGCTTCTCCGTGCCTAGGTTCTGCGCCGACTCTGTCTTTCCGAAGCTGAACTTTGGCGCCGACCCGCCCGTGCAGAACCTCTCTGTCACGGACGTGCACGGCTTCACCTGGGAGTTCCGCCACATTTATCGTGGGACTCCGCGCCGCCACTTGCTCACCACTGGCTGGAGCACGTTCGTCAACAACAAGAAACTGGTAGCTGGAGACTCTGTCTTGTTTATGAAGCATGCCCAACGTTTGTTTGTCGGAATTCGTCGCGCCACACGTTTCTCTTCTGAAAGGGCCAACTGCCCGAAACTCATGTTAATTGAGGAGGAGGAGGACGAGGAAGAAGACGAAGAAGACGAAGAGAAGGTGAAGAGAGTTTTCAAGAGGGACGGGAAGGGGAAACTGACGGCTAAGGTTGTTGTGGAAGCTGCAGAATTGGCTGCGCGACAAATGCAGTTTGAGGTTGTGTATTATCCCAAGGCTGGTTGGTCTGAGTTCGTGGTGAAGATTGAGGTGGTGGATGCAGCTATGAGGATTGCATGGAGCGAAGGAATGAGAGTGAAGATGTCTGTGGAGACTGACGATTCATCCAGGATGACTTGGTTTCAGGGTACCGTCTCTGCTGTCTCATCTCACAATAATGGCCAATGGTGCAGTTCGCCTTGGCGCATGCTTCAGGTTACATGGGATGAACCTGAAGGGCCGCGGAATGGAAAATGGGTTAGCCCTTGGCAGGTGGAACTTGTTTCCCCCCCACCTGTCCTTCATCCAGCATTCCCCCCAGCAAAAAGGCTCAGAACTGCTAATGGTTATGGGGTGCTGACTAATGGAGAGGGAGGAACCTTTTCTGTGGCCGGAGTCACTAATTCAGCAATGGTACAACTGAATCCGGCATATTTGGGTTATAGTACTTTTCCTGCTGGCATGCAGGGAGCCAGGCATGATGTATTTTCTGCATCAAGTTTTCCCAGTTATCCAAGGGACTTGTCTCATGTGTGTATCGATAATTCCTTTGGAAACAACACATTTTCAAGGCAGAAAAATTTGCCGACAGAACTACATGTTGGCGGCAACTCTCAATCTGATGAATTATCACCTGATAGTAGTTTCCATTCCTGTGTCACAGACACTCTTGGGAATACCAACAACTCAATAAAACCTGCGCCCGATTCATTTCAGCTATTTGGTGCAGTCATTAGGAAAGAACAACCTGTTCAAAATGATTTAACAGGAGATAAAGCCCCTGGCAGATGA


Promoter Sequence:
>Vu_10165::LG2:41736945-41738945(+)
TTTTGTTATAATAATTATACAATCTTTAAATAATTATAATTATAAACAAATTAAAAGAAATAATCAATAATGACATTTATGAAAAACACATTGCTGTCAGTACCACAACCAAATTCCAATATAATTTGTTTTAGAAACATCCATAAATAAAAGTACACAAATGTCAAACAAATCCTTTTGATACAATTTTTGAAATCTCTAAAATACCACCTTTACTAATATTCAGGACATTAAAAAATACATAACTCTTATTTTTCTTCAGTTTGTTTTATTTGTATTTTATTATTGTTTTTCCAATATTTGGCTTTGTTATCATTAAACATTTCAATCAATCAATCAAAACTGTTTTTTTAATCTTTAATTAAATATACAATTATGTACTACATGCCTGTAAAAAATTCAATATAATTAAATTATAAATTTCTTTATGAGTTAAATTTTGTAATTGTTTATTATATATATATATTTTTACCTTATTACACTTATAATGAAAAAAAAACATTTTTAAAGTATAATTATAACAATAACAATTAATAAAAGTATAATATTTTTATAATCTTTTTACAAATTTTATTAATTATTTTTTATTGTAATAATAGTTATATTATTATTTTTATTAATTACCATAAAAAATATCAACTTAATCACACCAAATATACTTTCTTGACCATCTTATATTAAAGAAAGTAGTTGAGAGAGATAAAAAATATATAAAATACACCACAGATAAAATAGAGTTAAATGTTTATTAACTTAGATATCATAATATAATATAATAGATAATGATGTGTAATATAAGTTCTATAAAAATAATAATTAAATGCTGAAAATTGAATTTGAGAAGTTATATAATTGAGTTAAAATTGGCAGCTTACTGGTGACAAGTAATGAATAAAGTTACAATGATAAAAAAAAATGGAAAAAAAAATCTATAAATTTTGTAAGGTGAACATTAATGCACAAAAAGAAATCCTTTTATAAAAAATTACCAAAAATATTATAATCCAATATACTAAACAGAAATAAATTTATTTTAATTAAATTAATCATTAGTTGAATAAAATATAAACAAATATTTAAAATTTGAATATGAGAGACTACACCACATGTACTTACACCACGAGTTGTGTGTGACGATCAGCTCGTAGTTTGTTATTGGTCTGTTACTTTTAAAGAAACTTTCTCCAATATAATATACCAGACTCTCTATCCATTTTTTTCATTATTTGACTCCTGTTTGCCTGAATGTAACAAATTTATTATTATAAGGGCAAAAGACAAAGAAAGCTCTATTTTTTACTTTAAAATAATGTTTTTGGTATATTAGAAATATATGTTTACATTAATACTAAATAAAATCATCAACTAATCAGCACTTTCTCTTTTCTTAAGCTGTACAATATTAAATGAAGAAAGAGAGGGAGAAGACAGATTTAATCTTAGAGATGATATCTTAAAACTGATAAATCAAAATACATATACAATATAATCTAAAGTATTGATATTTTGACTATTTTCATATCTTTTAACTTAAAATATTAATATATTATTAAAATGGTCTTGAAGTGGGCGCAAGTAATATTTTTTTGGTGAATGTCAAAATATAGTTTTCCTTAAAGTTACCCGAACAACAAGGCTAATAATTACATCTATTCTGTTTACGCAGATAAAATAAAAAAAGATAAAATAATTAAAAATATGATAGAATTAGATGAAAGGATGGGAATGGCTAAAGGCAATATATTCTGTTATGTGTAAAGAGGGACAGAATAGTAAATGAGTGAGAATTGTGAATTCCAGGAGACAAAATAGTTGATAGAGTGAGAAGATGACTCTATCTTTCAGTTAGAGTGTTATCTTTCCATAACAGAGACCGGATCACCAACACTATAAAAACAATACTCCCATTGGATTCTGTATGTTCCAAAACCCTAAGCAATCCCACCTTAATCTTCTGTATTAGGTAACGAATTTTGAATTTTGATTATCTGATTGAACAA


Gene Sequence:
>Vu_10165(+)
ATGCCACGACAATCGCCACCGTCACAGCCGCAGCAGCCCAGCGAACTGGAGCCGGCCATATGGCAAGCCTGTGCTGGACCGTCTGTGGAAATCCCGAAGCCAAATTCTATGGTTTACTACTTTCCTCAGGGACACTTTGATCAAGCGTCTTCAGCACCCAAGAATCTCTCCAGTCACCTTCTTGCCAAACCCTTCATTATCTGCAGTGTTGTCTCGGTTAATTTTCTTGCCGATCCTCTTACCGACGAGGTTTTCACCAAGATGGTTCTCCAACCTGTTGGTAACAACCTTCCTGTGGAATCCTTCCATACTCCTGCCTTTGCTCCTCCTGCTGGTGTTCCTCCTGCTGTTGCTCCTCCTCCAAATGACGACAACGAGGTCGTTTCGTTCGCAAAGATTCTCACGCCGTCTGATGCCAATAACGGCGGCGGCTTCTCCGTGCCTAGGTTCTGCGCCGACTCTGTCTTTCCGAAGCTGAACTTTGGCGCCGACCCGCCCGTGCAGAACCTCTCTGTCACGGACGTGCACGGCTTCACCTGGGAGTTCCGCCACATTTATCGTGGGACTCCGCGCCGCCACTTGCTCACCACTGGCTGGAGCACGTTCGTCAACAACAAGAAACTGGTAGCTGGAGACTCTGTCTTGTTTATGAAGCATGCCCAACGTTTGTTTGTCGGAATTCGTCGCGCCACACGTTTCTCTTCTGAAAGGGCCAACTGCCCGAAACTCATGTTAATTGAGGAGGAGGAGGACGAGGAAGAAGACGAAGAAGACGAAGAGAAGGTGAAGAGAGTTTTCAAGAGGGACGGGAAGGGGAAACTGACGGCTAAGGTTGTTGTGGAAGCTGCAGAATTGGCTGCGCGACAAATGCAGTTTGAGGTTGTGTATTATCCCAAGGCTGGTTGGTCTGAGTTCGTGGTGAAGATTGAGGTGGTGGATGCAGCTATGAGGATTGCATGGAGCGAAGGAATGAGAGTGAAGATGTCTGTGGAGACTGACGATTCATCCAGGATGACTTGGTTTCAGGGTACCGTCTCTGCTGTCTCATCTCACAATAATGGCCAATGGTGCAGTTCGCCTTGGCGCATGCTTCAGGTATAATATATAATAGCCAATTCTTTCGGAATGACAGTGGTTTATTTTGTTTGTCTTTAATGTGTGTGAGCGTGGGTATTATGTTTTATGAATTTTACTTTCTTGGATAAGTTTTGGTTTAGGGATTAATGTCAAAGAAGATTGGGGTGGAGATGGTGAAATAAAACTTGTGTATGACTTTCCCGAGACACTGAGTCTTTCCTTCTTGTTGAATTTTATAAGGAAGGGAGACTAGGATGCATGCGGGTGGATCTACATAGTTTTTAATTAGCCAACCGCCCAAAATTATTTGCTTAGAACTCTTCATTTGCTTGCAAAATGTGTGGCTATATGAGTATGATACACTTCTTGTTCTGTCGTAGATTGATTCTCTATGAGGTTTCATTTATGCATGGATTGATTCTATATAAGGTTTCATTTAATCACGTTTCTCATTAGCATTGTATTGATTCTAGAACTGAACTTTACTCAACAAGAAACTGATATTGAAAGGTGAGAACCCCTAATTGTGTCATTTCATTCTCCTAGTTGGAGAGGGGTCGGTTTTTTGTTGTTGTGAAGTGAAACTTAGCACGGAATTACTTATCTTATTTTATAGAGGATTTTTCCCGAAATTTTTTTTGTGTTTTATGGTTCTATTATTGTATACAAGGCTGCTCTCAAATGATGGAATGGGGCATTGAAAAATATATTCATTTTATTTGCTGGTGAAATATGAGAACAGAATACTGACACGTTCTTTTGGGCATAAAAGCATTGGAGAAGGTTCAATGTAGTTTATATTTATCATTTTAGCTAGTGTATGTTAAGTGAATGAAGAGACTGAACAGGGAAATGTGGCAGTTTGATAACTATGGTTGTCTGTTATGCTGGGGTACCTGTTTTTTGTTTTGTCTTGCCTTTGTCTGTTCTGCCTGTTGAATTTATACACCTTTGTCTAGATGTTCTACGTTGTTGAGGTATGATTTGCAAAAAATTATCAAATTAGTGAATAGTTTGTTTTTTTTTGTTTGCAAACTGTTTTCAATTTGGATAAAGTCTTTGTTACAATTACTATACGTCAGTCTTGATTATACTTGCCATATCAAATTCTCAACAAATGTCACTGGGATAATCTCTGTTCATGCATGTGTCTAACTACCTTTTTTCACTTTGCTGGGAACAATTGTATGACTGCGTTAATTTCTAATGTTTGAGTCTCGGTATTATTTTCATGGCAAAAAGGTTCTTTTGTTGAAAGAAACTATTTTTCACATACGTTGTACTTGAAGAAGTTATCTTGTCTCTCAAATTACTGATACTGCTATTAATATTTTCTGATTTTAACATCATAGGTTACATGGGATGAACCTGAAGGGCCGCGGAATGGAAAATGGGTTAGCCCTTGGCAGGTGGAACTTGTTTCCCCCCCACCTGTCCTTCATCCAGCATTCCCCCCAGCAAAAAGGCTCAGAACTGCTAATGGTTATGGGGTGCTGACTAATGGAGAGGGAGGAACCTTTTCTGTGGCCGGAGTCACTAATTCAGCAATGGTACAACTGAATCCGGCATATTTGGGTTATAGTACTTTTCCTGCTGGCATGCAGGGAGCCAGGCATGATGTATTTTCTGCATCAAGTTTTCCCAGTTATCCAAGGGACTTGTCTCATGTGTGTATCGATAATTCCTTTGGAAACAACACATTTTCAAGGCAGAAAAATTTGCCGACAGAACTACATGTTGGCGGCAACTCTCAATCTGATGAATTATCACCTGATAGTAGTTTCCATTCCTGTGTCACAGACACTCTTGGGAATACCAACAACTCAATAAAACCTGCGCCCGATTCATTTCAGCTATTTGGTGCAGTCATTAGGAAAGAACAACCTGTTCAAAATGATTTAACAGGAGATAAAGCCCCTGGCAGATGA