Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_10045 LG2 39891670 39894699 PREDICTED: wall-associated receptor kinase 3-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   cell surface receptor signaling pathway, protein phosphorylation, protein phosphorylation, protein phosphorylation
Cellular Component   is active in   plasma membrane
Cellular Component   located in   extracellular region, plasma membrane
Molecular Function   enables   kinase activity, polysaccharide binding, calcium ion binding
SNP Position Effect Amino acid change
C/G 39891688 5_prime_UTR_variant
C/G 39891718 synonymous_variant p.Val3Val
T/G 39891730 missense_variant p.His7Gln
C/T 39891908 missense_variant p.Leu67Phe
G/T,* 39891920 missense_variant p.Val71Phe
G/A,* 39891939 missense_variant p.Arg77Lys
T/G 39891962 missense_variant p.Phe85Val
G/C 39891975 missense_variant p.Arg89Thr
C/G 39892028 missense_variant p.Pro107Ala
A/T 39892030 synonymous_variant p.Pro107Pro
C/T 39892035 missense_variant p.Ala109Val
G/A 39892041 missense_variant p.Ser111Asn
T/C 39892045 synonymous_variant p.Cys112Cys
A/G 39892049 missense_variant p.Asn114Asp
A/C 39892050 missense_variant p.Asn114Thr
A/C 39892059 missense_variant p.Asn117Thr
G/C 39892062 missense_variant p.Gly118Ala
C/T 39892068 missense_variant p.Ser120Leu
C/G,* 39892076 missense_variant p.His123Asp
C/T 39892080 missense_variant p.Ser124Phe
T/A 39892088 missense_variant p.Phe127Ile
C/G 39892093 missense_variant p.Ser128Arg
T/A 39892097 missense_variant p.Tyr130Asn
G/A 39892114 synonymous_variant p.Leu135Leu
A/C 39892203 missense_variant p.Asp165Ala
T/C 39892226 missense_variant p.Tyr173His
G/C 39892240 missense_variant p.Lys177Asn
G/A 39892301 missense_variant p.Glu198Lys
A/C 39892303 missense_variant p.Glu198Asp
T/C 39892307 missense_variant p.Tyr200His
G/T,C 39892320 missense_variant p.Gly204Ala
C/G 39892333 missense_variant p.Phe208Leu
G/A 39892334 missense_variant p.Asp209Asn
T/G 39892337 missense_variant p.Tyr210Asp
A/G 39892340 missense_variant p.Asn211Asp
G/A 39892349 missense_variant p.Asp214Asn
G/C 39892352 missense_variant p.Glu215Gln
C/G 39892377 missense_variant p.Ala223Gly
A/T 39892421 missense_variant p.Thr238Ser
C/A 39892429 missense_variant p.Phe240Leu
C/G 39892443 missense_variant p.Thr245Arg
G/A 39892452 missense_variant p.Ser248Asn
C/G 39892453 missense_variant p.Ser248Arg
C/T 39892459 synonymous_variant p.Pro250Pro
A/C 39892477 synonymous_variant p.Ala256Ala
C/A 39892512 missense_variant p.Ala268Asp
C/G 39892537 missense_variant p.Asn276Lys
T/G 39892538 missense_variant p.Tyr277Asp
A/G 39892559 missense_variant p.Thr284Ala
C/A 39892560 missense_variant p.Thr284Lys
A/T,* 39892563 missense_variant p.Glu285Val
T/C 39892590 missense_variant p.Phe294Ser
C/T 39892705 intron_variant
C/T 39892727 intron_variant
A/T 39892880 intron_variant
T/C 39892884 intron_variant
G/T 39892971 missense_variant p.Val321Leu
A/G 39892978 missense_variant p.Glu323Gly
A/G 39893078 synonymous_variant p.Arg356Arg
T/C 39893123 intron_variant
A/G 39893125 intron_variant
T/A 39893217 intron_variant
T/C 39893267 missense_variant p.Phe374Leu
G/C 39893290 synonymous_variant p.Val381Val
G/A 39893322 missense_variant p.Arg392Lys
A/G 39893434 synonymous_variant p.Lys429Lys
G/T 39893438 missense_variant p.Ala431Ser
C/T 39893473 synonymous_variant p.Gly442Gly
A/C 39893562 missense_variant p.Gln472Pro
G/T 39893569 missense_variant p.Glu474Asp
G/T 39893584 missense_variant p.Glu479Asp
C/T 39893710 synonymous_variant p.His521His
G/T 39893718 missense_variant p.Ser524Ile
A/T 39893728 missense_variant p.Leu527Phe
A/G 39893867 missense_variant p.Thr574Ala
C/T 39893974 synonymous_variant p.His609His
C/T 39894027 missense_variant p.Ala627Val
G/A 39894091 synonymous_variant p.Ala648Ala
C/T 39894100 synonymous_variant p.Phe651Phe
T/C 39894115 synonymous_variant p.Asn656Asn
T/C 39894121 synonymous_variant p.Gly658Gly
G/A 39894243 missense_variant p.Arg699Lys
G/A 39894268 synonymous_variant p.Gly707Gly
G/A 39894288 missense_variant p.Arg714His
A/C 39894344 missense_variant p.Thr733Pro
T/A 39894353 missense_variant p.Ser736Thr
G/A,* 39894381 missense_variant p.Arg745Lys
C/A 39894453 3_prime_UTR_variant
T/C 39894614 3_prime_UTR_variant
G/T 39894682 3_prime_UTR_variant
G/A 39894688 3_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_10045.1
MSVNSNHLLLVVLLIAAVAAAKTIPMSKPNCPSKCGNVTIPFPFGLTNPCSLNTSFLITCNHSIPFLNSNVTTPFFRSNVTTPFFNTIRKVKVLDISLDGQLHVSLPVATSCVNNKNGESDKHSFFFSLYTPFHLSSRQNKLTVLGAYTAGVVYDGYLGFWRTYDPTYCVSFYSIYKMDESCSGTFCCETPIQHRLSEFYYSCGANIFDYNSTDEAFQSYPCAYTFLVKEGAYNFSMTDFINFNTSNSFPVVVDWAVGNTCLDAQKNASSYACKSNYSECHNATEGPGYHCKCFTGFRGNPYLSDGCQDVDECVEESHDCVKERSTCSNSPGSYSCSCLKGYEGDGKNNGSGCVIRSNRKIIIALSVTGSILAFVGGTLYVYCALKKSKLNRLKEHFFQLNGGLLLQQQLNRYSGSNELTKIFNVKELKEATNNFNEEMVLGEGGEGTVYKGILPDNRIVAIKKSRISNPNQIEHFINEVILLCQINHRNVVKLLGCCLETEVPLLVYEFVPNGTVYEHLHDQSKSLRLTWKRRLQIAIETAGALAYLHSATHAPIVHRDVKTSNILLDHNLTTKVSDFGASKIIPLDRTQLTTLVLGTLGYLDPEYFHSSQLTEKSDVYSFGVVLAELLTGEKALSFERPEPHRNLAIHFHSSMNEGQLLDIVDGRIINEANVEQLMDVANIASHCLRLKGEERPTMREVAMELEGINIVEKRQWEKVNLSSEETETLLKATPSSSFSVDGVNRRSMHSGSDILNRLSSSLTSGR*


CDS Sequence:
>Vu_10045.1
ATGAGTGTCAATTCAAATCATCTGCTACTTGTTGTGCTCCTGATTGCAGCGGTAGCAGCAGCTAAAACTATACCTATGTCAAAGCCAAACTGCCCATCAAAGTGTGGCAACGTTACCATTCCCTTTCCCTTTGGCCTCACAAACCCCTGTTCTCTCAACACCTCATTTCTCATCACTTGCAACCATTCCATTCCATTCCTCAATTCTAATGTTACCACTCCATTCTTCAGATCTAATGTTACCACTCCATTCTTCAATACTATTAGAAAGGTGAAGGTGCTGGACATATCACTCGACGGCCAACTTCACGTTTCATTGCCAGTTGCCACAAGTTGTGTCAATAACAAGAATGGTGAATCAGACAAGCATTCCTTTTTCTTCAGCTTATACACACCTTTTCACCTGTCATCTCGGCAAAACAAGTTAACTGTATTGGGCGCTTACACGGCAGGAGTAGTATATGATGGCTATTTAGGATTCTGGAGAACATACGATCCCACTTATTGCGTGTCCTTCTACAGCATTTACAAGATGGACGAGTCATGCTCCGGCACTTTCTGTTGCGAGACTCCAATTCAACATAGGCTATCGGAATTCTACTATTCTTGTGGTGCAAATATCTTCGACTATAACTCAACCGATGAGGCATTTCAGTCCTACCCATGTGCTTATACATTTCTGGTTAAGGAGGGAGCCTACAATTTCTCCATGACAGATTTCATCAATTTTAACACAAGCAACAGCTTTCCCGTGGTTGTGGATTGGGCAGTGGGGAACACGTGCCTAGATGCTCAGAAGAATGCTTCAAGCTATGCGTGTAAGTCAAACTACAGTGAATGTCACAATGCAACGGAGGGACCTGGTTACCATTGTAAATGCTTCACTGGTTTTCGGGGAAATCCTTACCTATCTGATGGTTGTCAAGATGTTGATGAATGTGTTGAGGAATCCCATGACTGTGTAAAGGAGAGATCAACATGCAGTAACAGCCCAGGGAGCTACAGTTGTTCTTGTCTAAAGGGATACGAAGGAGATGGAAAAAATAATGGAAGCGGATGTGTTATCAGAAGTAACCGCAAAATCATAATTGCTTTAAGTGTGACTGGAAGTATATTGGCATTTGTGGGGGGAACCTTATACGTGTACTGTGCATTAAAGAAAAGCAAACTCAACAGACTTAAAGAACATTTTTTTCAACTAAACGGTGGTCTGCTATTACAACAACAGTTAAACAGGTACAGTGGATCAAATGAATTGACAAAAATATTTAATGTGAAAGAACTAAAAGAGGCCACCAACAATTTCAATGAAGAGATGGTCTTAGGCGAAGGTGGGGAGGGAACAGTTTACAAAGGAATATTACCTGACAATAGAATTGTAGCAATAAAAAAGTCGAGAATTAGTAATCCAAACCAAATTGAGCATTTCATCAATGAGGTGATTCTTCTTTGTCAAATCAACCATAGAAATGTGGTGAAACTCTTGGGATGTTGTTTAGAGACAGAGGTTCCCTTACTTGTTTATGAATTTGTTCCCAATGGAACTGTCTATGAGCATCTCCACGATCAAAGCAAATCTTTAAGACTTACATGGAAAAGAAGATTACAAATAGCAATTGAAACTGCTGGGGCCTTGGCGTACTTGCATTCTGCTACCCATGCACCAATCGTACATAGAGATGTGAAAACTTCAAACATACTACTTGATCACAATCTCACTACAAAGGTTTCTGATTTTGGAGCTTCAAAGATTATTCCTCTTGATCGAACTCAGTTAACCACTTTGGTGTTGGGGACACTAGGGTATCTTGACCCAGAATACTTCCACTCAAGCCAGTTAACAGAGAAAAGTGATGTCTATAGTTTTGGAGTTGTCCTAGCCGAACTACTAACAGGAGAGAAGGCACTCTCTTTTGAAAGGCCAGAGCCTCACAGAAACCTAGCGATTCACTTCCATTCTTCAATGAATGAGGGTCAATTACTTGACATTGTCGATGGCCGCATAATAAACGAGGCAAATGTTGAGCAACTAATGGATGTTGCAAATATTGCAAGCCATTGTTTGAGGTTGAAGGGGGAGGAAAGACCCACCATGAGAGAAGTGGCAATGGAACTTGAAGGGATCAACATTGTGGAGAAGCGCCAATGGGAAAAAGTCAACTTGTCATCAGAGGAGACTGAAACTCTTCTCAAAGCAACACCATCATCTTCTTTTAGTGTTGATGGTGTTAATAGAAGAAGCATGCATTCTGGCTCTGATATTTTAAACCGATTGTCCTCCTCCTTAACTAGTGGAAGATGA


Promoter Sequence:
>Vu_10045::LG2:39889670-39891670(+)
AAAAATTAAACAGAAACGGTTCATCGTTAATCTGGGAATCCTAAAGAGGCTAATTTTATTGGTTTTTAAAAAATAAAAGCTTCGTTTAAGATTACAAGAAATTATTACAAGAAATTGTAATCAGATTTTACGTTAATTTGAGAATTTTGTTTGGATTAAATGAATCAAAATAATAATTCCGTAAATCTAAAAATCCAAATCAACGAAAACATGCAAGGTAGAGGAATAAACTTGCTCTTATACCAAATGATAAAATAGCAGAGTATAAAATTGACCTAAACATGTTATATTAACATCACATTAACACATTCAGATCAAAAACAGCGGAAGCAAAATGAAAGACCTCCTGCCATTGCAATTTTGTAAATCCAAACATAGACAGTTTTGTTTTCTAAAGCTTAACTCACTCAAATTCGATGGTCCATTCTCTTATATAAAGTCTGCTCCATAACCTCTATGCAGTTAAAAAGATAAAAATAATGGCTTAATAGACCACTTTATGTTCCTTAAAAATAAAAACTAAAAATACTATAATATTTATTTTATATTTAAAAATAATGCTAACATAAATCAGTTGAAGAAGGTGCGAGAGGAGTAGTAATTGGGACTGCAAAGAAAGGAACAGAGGGTTCAGAGAGAAACATTTTGTATAGTTTAGAGAAACTGAGAAACTGGAAAATATGAGACAGTAGGGGACACAACGAGATTTAAGTGCCCCAAGAATCACACTCTGATGTTTGGTTTGTCACCATGTCCGATAGTTGCTTCATTTAGCAAAGATTTGAACTTTGCTTTTTTTTTTTTAATTATTTTAGTGAGTTTTGTGGTTGTGACACCTATAAAAGTTCCATCTGTGTTCCCTTCAATTGGATATATACATATACTATAAATATAAATACTACTAATTATAGATATGTAAAAACATAATTTTCTCTGCTTATATACAAAAGTCGTACATTCAAACTGATTTCTCTTTTTAGCCGTTTTTTTATATAACAGAAAAATATGTTTTTTAATGTTTTTTTCATTTATTAGCTTAATTAATTTTTAAAAATCTCATAAATTTTGATATCTTTAATTTAGTTGGAATTGATTCATTATTTTATGAACATGAGTAGCAATTGGTATTTCTTAGTGCCAACATGGGGTGTATGTCAAGGTGAAGAATAAAATTTGAAATCGGATATCATTATCATTTTGGAAGTAGATGAAATTGAATTTCATAAATATTGTAAATGAGTTCGGAAAGTGAGTAATTGTATATAAATGTCAAGAAGGTAGTAGTTATTTATTAAGGCTACGCACTTATGTGATCTCTGTCTGATTCATGCATGCACTTTTTAGTCTCATTTAACAAAACACGATTTAGTTCGATTTAGTTGTTTCAGAAATGGTCATAATAAAACAGATATAGACATATACTTCATTTTATTTATGGAGATAAAATTATATTTTGATGTATGAACTTTTCACTCAACTTTAGAAAAAAGTATCCTTTATAATTATACATAGAAGGAAAACTTCTTCCTTTAAAAATCGCCTGTAATATATTAAAATATATTTGTGGAATTTTGCTTAAATTATACCATTTTGATAAAAGATATTGGGAAGGATTCTGCCAGAAGTAGTTGAGTTGAGATTAGTACATAGGTAAACATCCGACATCTAATATTTATTTCCTCTATTTCTATGACAAAATATCCTATTCAATGTATTTATTATTCATAGAGAAAAAGTCGTTTTGGTTGATCTTTCAACAAGCTGCTTGCTCTCCACTCATAATTCCTTCGTTCGTAGATGATAATCAATCAATAGTTGACCCCGAGTCTTCACTTCCCTTCCATATTATTTAAAAAAAATAAAAAATATTGTTTCATGATTTGACAACGTTGAATGCATTGTTGGGAAGATCATTGGAAGGGGCAACTGAAGCTTATCATTGACCCCAAGTCTTTCTGAATCATTCATTGCATATACTTAGTAAATGATAGGAGCACACA


Gene Sequence:
>Vu_10045(+)
ACTCATGATTAGATCAAGCTGAAAGAAAAACAAGGTGCAGATGAGTGTCAATTCAAATCATCTGCTACTTGTTGTGCTCCTGATTGCAGCGGTAGCAGCAGCTAAAACTATACCTATGTCAAAGCCAAACTGCCCATCAAAGTGTGGCAACGTTACCATTCCCTTTCCCTTTGGCCTCACAAACCCCTGTTCTCTCAACACCTCATTTCTCATCACTTGCAACCATTCCATTCCATTCCTCAATTCTAATGTTACCACTCCATTCTTCAGATCTAATGTTACCACTCCATTCTTCAATACTATTAGAAAGGTGAAGGTGCTGGACATATCACTCGACGGCCAACTTCACGTTTCATTGCCAGTTGCCACAAGTTGTGTCAATAACAAGAATGGTGAATCAGACAAGCATTCCTTTTTCTTCAGCTTATACACACCTTTTCACCTGTCATCTCGGCAAAACAAGTTAACTGTATTGGGCGCTTACACGGCAGGAGTAGTATATGATGGCTATTTAGGATTCTGGAGAACATACGATCCCACTTATTGCGTGTCCTTCTACAGCATTTACAAGATGGACGAGTCATGCTCCGGCACTTTCTGTTGCGAGACTCCAATTCAACATAGGCTATCGGAATTCTACTATTCTTGTGGTGCAAATATCTTCGACTATAACTCAACCGATGAGGCATTTCAGTCCTACCCATGTGCTTATACATTTCTGGTTAAGGAGGGAGCCTACAATTTCTCCATGACAGATTTCATCAATTTTAACACAAGCAACAGCTTTCCCGTGGTTGTGGATTGGGCAGTGGGGAACACGTGCCTAGATGCTCAGAAGAATGCTTCAAGCTATGCGTGTAAGTCAAACTACAGTGAATGTCACAATGCAACGGAGGGACCTGGTTACCATTGTAAATGCTTCACTGGTTTTCGGGGAAATCCTTACCTATCTGATGGTTGTCAAGGTCTCTATATTCTCCTTCTTTTAACATAACTCATTTTTAATGTTTATCAATTTTATAAAACTACCTTTATCAGTTACTTCAAATTTGATGCACACAATATTAAAGCACTGTTACATTCATTATTTATTTTAGGATGAAATTTAAATACCAAACTTGTTGAGTTAAAACATCACATATTGTGAAACTGGTATATATGTTAATTATTTCGTATTTAGTATTGTTAACAAGTGTACAAATTAATGGAAACTATACACAAATTGTGAACATTTTTTTCTTTAAAAGTCGTTAATTATCTTTCCAGATGTTGATGAATGTGTTGAGGAATCCCATGACTGTGTAAAGGAGAGATCAACATGCAGTAACAGCCCAGGGAGCTACAGTTGTTCTTGTCTAAAGGGATACGAAGGAGATGGAAAAAATAATGGAAGCGGATGTGTTATCAGAAGTAACCGCAAAATCATAATTGCTTTAAGTAAGTATTCTTTTGTTTATCAAAACATTATATTCTGCACTCCAGAACACGATTAACTAGCTTTACTATTACAATATAATATTCCTGAAAGAAATTTCACTGCTATAAAATACCATATTAATATAAACGATGATCAGGTGTGACTGGAAGTATATTGGCATTTGTGGGGGGAACCTTATACGTGTACTGTGCATTAAAGAAAAGCAAACTCAACAGACTTAAAGAACATTTTTTTCAACTAAACGGTGGTCTGCTATTACAACAACAGTTAAACAGGTACAGTGGATCAAATGAATTGACAAAAATATTTAATGTGAAAGAACTAAAAGAGGCCACCAACAATTTCAATGAAGAGATGGTCTTAGGCGAAGGTGGGGAGGGAACAGTTTACAAAGGAATATTACCTGACAATAGAATTGTAGCAATAAAAAAGTCGAGAATTAGTAATCCAAACCAAATTGAGCATTTCATCAATGAGGTGATTCTTCTTTGTCAAATCAACCATAGAAATGTGGTGAAACTCTTGGGATGTTGTTTAGAGACAGAGGTTCCCTTACTTGTTTATGAATTTGTTCCCAATGGAACTGTCTATGAGCATCTCCACGATCAAAGCAAATCTTTAAGACTTACATGGAAAAGAAGATTACAAATAGCAATTGAAACTGCTGGGGCCTTGGCGTACTTGCATTCTGCTACCCATGCACCAATCGTACATAGAGATGTGAAAACTTCAAACATACTACTTGATCACAATCTCACTACAAAGGTTTCTGATTTTGGAGCTTCAAAGATTATTCCTCTTGATCGAACTCAGTTAACCACTTTGGTGTTGGGGACACTAGGGTATCTTGACCCAGAATACTTCCACTCAAGCCAGTTAACAGAGAAAAGTGATGTCTATAGTTTTGGAGTTGTCCTAGCCGAACTACTAACAGGAGAGAAGGCACTCTCTTTTGAAAGGCCAGAGCCTCACAGAAACCTAGCGATTCACTTCCATTCTTCAATGAATGAGGGTCAATTACTTGACATTGTCGATGGCCGCATAATAAACGAGGCAAATGTTGAGCAACTAATGGATGTTGCAAATATTGCAAGCCATTGTTTGAGGTTGAAGGGGGAGGAAAGACCCACCATGAGAGAAGTGGCAATGGAACTTGAAGGGATCAACATTGTGGAGAAGCGCCAATGGGAAAAAGTCAACTTGTCATCAGAGGAGACTGAAACTCTTCTCAAAGCAACACCATCATCTTCTTTTAGTGTTGATGGTGTTAATAGAAGAAGCATGCATTCTGGCTCTGATATTTTAAACCGATTGTCCTCCTCCTTAACTAGTGGAAGATGATTAGCTGATATTATTATAATAATTCACAAGACCGTCGTTATTCAAGACTAGATTCAGAGTAATGGATGTTATGTATTATATGTTGTATTTTTTTTATTGCACAATGTGTCATTATTTTTATTATTAAATGTTGTGTACTATTGATAGACTTTTTAGTTAATTCATTAGGATTATGTGCGGAGTTGGTGAATTGTCTCTCAAGTTATATTGGTTTTACAATTAATATTCAAGTGGAAACTGTGGTTGAGATG