Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_10030 LG2 39652509 39656352 PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670 isoform X1
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/C 39652688 3_prime_UTR_variant
T/A 39652762 3_prime_UTR_variant
C/T 39652927 synonymous_variant p.Val721Val
G/T 39653146 upstream_gene_variant
G/A 39653389 missense_variant p.Thr655Ile
C/T 39653504 upstream_gene_variant
G/T 39653550 upstream_gene_variant
A/T 39653557 upstream_gene_variant
G/A 39653661 synonymous_variant p.Leu597Leu
A/T,C 39653764 upstream_gene_variant
T/A 39654144 missense_variant p.Lys494Asn
A/T 39654153 missense_variant p.Asn491Lys
T/C 39654383 missense_variant p.Ile451Val
G/A 39654384 synonymous_variant p.Ile450Ile
T/A 39654388 missense_variant p.Glu449Val
A/T 39654402 missense_variant p.Phe444Leu
C/G 39654452 missense_variant p.Glu428Gln
A/T 39654459 missense_variant p.Asp425Glu
T/C 39655015 missense_variant p.Ile268Val
G/C 39655022 synonymous_variant p.Ser265Ser
C/T 39655281 missense_variant p.Arg179Lys
G/T 39655283 missense_variant p.His178Gln
G/T,C 39655291 missense_variant p.Arg176Gly
T/A 39655301 splice_acceptor_variant&intron_variant
C/T 39655318 upstream_gene_variant
C/T 39655332 upstream_gene_variant
C/T 39655336 upstream_gene_variant
C/T 39655337 upstream_gene_variant
G/A 39655343 upstream_gene_variant
G/A 39655365 upstream_gene_variant
T/G 39655406 missense_variant p.Ser164Arg
T/C 39655414 missense_variant p.Lys161Arg
C/T 39655419 synonymous_variant p.Val159Val
G/A 39655441 missense_variant p.Ala152Val
C/T 39655442 missense_variant p.Ala152Thr
G/A 39655443 synonymous_variant p.Leu151Leu
G/A 39655452 synonymous_variant p.Cys148Cys
A/G 39655494 synonymous_variant p.Thr134Thr
G/A 39655533 synonymous_variant p.Val121Val
T/C 39655607 missense_variant p.Ile97Val
T/C 39655614 synonymous_variant p.Lys94Lys
G/C 39655644 upstream_gene_variant
T/C 39655880 upstream_gene_variant
C/A 39655889 upstream_gene_variant
C/T 39655893 upstream_gene_variant
A/T 39655897 upstream_gene_variant
A/T 39655923 upstream_gene_variant
A/T 39655928 upstream_gene_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_10030.1
MPQTAPTGEPSHGGSGGRMVVVGVKMDSPSKELLTWALVKVAHPGDTVVALHVLGNQETVNGDGKSSLLSLVKAFDSVLAVYEGFCNLKQVDLKLKICRGSSVKKILVREANGYTATHVVVGTTHGLHRIRSSTFIAKYCAKKLSKDCCILAVNNGKVVFKRESSPPSVDLQGIDRQHRNGLIGSIHWTLSKNTKVLSDDNSGTDADEKKPGQSSDHSLAKFFLDSTETVRKPNCSICGTTLALPDPSCNQSEEGFSGDDGKENSLAIVPVQVQPTVAAETELKPGWPLLHRRIISDTQSTDRSLMHPKISVVQWAMRLPSRNISYASDRDEKPESCDQSLDQPAALDRESGALVPIDSEIGTASSPESNSRNIPKELEGLHEKYSSTCRLFGYQDLVSATSNFLPENFIGKGGSSQVFRGCLSDGKELAVKILKPSEDVLKEFILEIEIITTLHHKNIISLLGFCFENGKFLLVYDLLSRGSLEENLHGNKKKSLAFGWSERYKVAVGIAEALDYLHSKDDQPVIHRDVKSSNVLLSEDFEPQLSDFGLAKWASTSSSQITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAYGVVLLELLSGRRPINRDYPKGQESLVMWAGPILNSGKVLQLLDPSLGDNYDHEEMEKMVLAATLCIKRAPRARPQMNLILKLLQGDIETMKWARLEVNNGLDAAETVDDEACPPSDNLQSHIDLALRDVVEESLSMCSVEQGLTLEDYLRGRCSRASSFD*


CDS Sequence:
>Vu_10030.1
ATGCCTCAAACGGCTCCTACCGGAGAACCCTCCCACGGAGGCTCCGGTGGCCGCATGGTGGTAGTGGGGGTGAAGATGGACTCCCCCAGCAAGGAATTGCTCACGTGGGCTTTGGTTAAAGTGGCTCACCCTGGTGACACCGTGGTTGCTCTGCATGTTCTTGGGAACCAGGAAACTGTGAATGGAGACGGGAAATCTTCGCTGCTTTCGCTTGTCAAGGCGTTTGACTCTGTTCTTGCCGTTTATGAAGGATTCTGTAACTTGAAACAGGTCGACCTCAAACTCAAAATTTGCCGTGGTTCATCAGTGAAGAAAATTTTGGTTCGAGAAGCAAATGGTTACACGGCAACTCATGTTGTGGTCGGAACAACTCATGGTTTGCATAGAATCCGGTCATCTACTTTTATAGCTAAATACTGTGCTAAAAAGTTGTCCAAGGATTGCTGTATTCTCGCTGTTAACAATGGGAAAGTTGTGTTCAAGCGTGAGAGCTCGCCACCGAGTGTTGACTTACAAGGGATTGATCGTCAGCACAGAAATGGTTTGATCGGTTCGATTCATTGGACACTCAGTAAGAATACAAAAGTTCTAAGTGATGACAATTCAGGGACGGATGCTGATGAGAAGAAACCTGGCCAAAGTTCAGATCACAGTTTAGCTAAGTTTTTCCTAGATTCTACAGAAACTGTTAGAAAACCGAACTGTTCAATTTGTGGCACAACCTTGGCATTGCCAGACCCTTCTTGCAACCAATCTGAAGAAGGGTTTTCTGGTGATGATGGTAAAGAGAATTCCTTGGCTATAGTACCAGTGCAAGTGCAACCTACTGTTGCTGCAGAAACGGAATTGAAACCTGGTTGGCCACTACTACATCGGAGAATTATATCGGACACACAATCTACTGATAGATCATTGATGCACCCCAAGATTTCCGTGGTCCAGTGGGCAATGAGGTTACCTTCTAGAAATATTTCATATGCTTCAGATCGTGATGAAAAACCTGAAAGTTGTGATCAAAGCCTGGATCAACCTGCGGCTTTAGATAGGGAAAGTGGTGCTCTTGTTCCAATAGATTCTGAAATCGGAACTGCTTCTTCGCCAGAAAGCAATTCAAGAAACATTCCTAAAGAATTGGAGGGCCTTCACGAGAAGTACTCCTCAACTTGTAGATTGTTTGGGTACCAAGATCTTGTATCTGCCACATCAAATTTCTTACCGGAAAACTTTATTGGGAAAGGAGGAAGCAGTCAGGTTTTTAGAGGCTGCCTTTCTGATGGCAAGGAACTTGCTGTCAAGATTCTAAAGCCTTCCGAAGATGTATTGAAGGAATTTATTCTGGAAATCGAAATCATCACTACCTTGCATCACAAAAACATAATTTCCCTCCTGGGATTCTGCTTTGAGAATGGCAAATTTCTTCTGGTTTATGATCTCTTATCAAGGGGAAGTCTTGAAGAGAATCTTCATGGTAATAAGAAAAAATCACTTGCGTTTGGTTGGTCGGAGAGATATAAGGTAGCTGTGGGTATTGCTGAGGCTTTAGATTATCTGCATTCTAAAGACGATCAACCCGTGATCCATCGGGATGTAAAGTCATCGAATGTGTTATTATCCGAGGATTTTGAACCCCAGCTCTCTGATTTTGGACTGGCAAAATGGGCATCAACCTCGTCATCACAAATAACCTGCACAGATGTTGCTGGAACCTTTGGTTACTTGGCTCCTGAATACTTCATGTACGGCAAAGTAAATGATAAGATTGATGTTTATGCATATGGGGTGGTGCTCCTCGAACTTCTTTCGGGGAGAAGGCCCATAAACCGTGATTATCCTAAAGGCCAAGAGAGTCTTGTCATGTGGGCAGGTCCAATTCTAAATAGTGGAAAGGTGTTACAATTGTTAGATCCTAGTTTGGGTGATAACTATGATCATGAGGAGATGGAAAAGATGGTGTTGGCAGCCACACTGTGTATCAAACGTGCTCCAAGGGCTAGGCCTCAAATGAACCTTATCTTAAAGCTCCTTCAAGGTGACATTGAAACAATGAAGTGGGCAAGGTTAGAAGTTAACAATGGTTTGGATGCAGCAGAAACGGTTGATGATGAAGCGTGTCCACCTAGTGATAATCTGCAGTCACATATAGATCTTGCACTGCGTGATGTGGTGGAGGAGTCACTCTCCATGTGCAGTGTTGAGCAGGGTTTGACATTGGAGGACTACTTGAGAGGCCGTTGCAGCCGTGCATCAAGCTTTGACTGA


Promoter Sequence:
>Vu_10030::LG2:39656352-39658352(-)
CTTACCCTTAATTTTTTGTGCTGTCTGTCTTTATGTGTGTTTTCTCTTTTGCGATGATTACCTTAATGGTGTGAATTTAGAGAGACATTCTTTACGGTTGCTCCAGCGAGAGATGAGAGTGAAATAGTTGAAAAATCAAATAATTCTACCGATATAGATATTGTTTTTTATAAGTGCATTTTCATACAATAATTCCATATTTACGGTTAAAAATGGGATATTACTATTTTCTTCACATATACATATTTCTCCATCTTATGATACAATAACTTTTTGTTACTGAGTTTCAATTATATTTCAAATGTCATATTATAACTTTGTTCAGAAGACTCTACTTACATTTTTTAAGATATATCTTTTGACATAATTAACATTTGTATATTTGAATAAATTTTCTAAGATAGCGTATGATAACAACTTACATCATATAACAAACAATTAATTTAACTTATTTTGGTAAGTGCTTACTTAACAAGCATAAGTTCAATAAGCTTTTAAATTAAATCGTGATCCTTAATTATATTTGAAATTAAGTGTTTATAAAAATTCGTTAGCTAACGGTTTGCTGTCTACTATTCAAACCAACCAGTACACGTCTCTTGAAAGGAATGTTTTTAACATAAGTAAAATAGAAAATGCATTTAAAACTCTTCATTTTTTCAATAATTAAAATTATATTAAAATAAAAAAGTGGGAATGGAATTTTGATGTTCTGAAAAATATTGATATGAATATTAATTTTAATTCAGTTCATACATGAATATACAATTTAGAAAAGAAAAACAATATTTTATAGATATTTGGACATGGTTTTAACGTTTGTGATAGCTGCAATGAGATTTGATGAAGTGAAGGAAGATAAAACAGTGTGAATGGTTGTTGAATAATGAAATATGAGAACGTGAAAAATGACCTAATAAAAACTTAAAAAGACACTGAATAAAAGGCTCTGAAGCAACTTTAAAGCGTGAAAAATTCGTATATGGATGTTAACACAATGATTGAAAACGAAGCAAATTAAAGCGTGATGTTATTCAAATGAGAATGACGTAACAAAACTCATTCCTATTCCTTCACCAAATAAAAGACCAGCAATTTGTAATTTCTTATTCATACACGGAATATTCTATTCTATCATAAAATAATAATAATAATAATAAAAATAATTGTCCTACATTAGGTATCCCACCATCAATCAAATTTCTTATCCATATTTCATTTCAGAAAATCCTTCGTTCATTTCAAAACTTTTAAAAACCTAATTCTAATTCAAGAGAGATTCGATTTCAACGCAACTAATTGACCTATAATCTGAATATCTAAAATAATGTTTCACTAATTTCGCCTTACAGATTTTTTAGTATTTTTAAATAATTAATTAAATTCAAAATAAATAAGTATACAAATAATATACAATTTATATTATAAAGCATTAATGATGATTAATAAATATTTTAACAGAAACTGTATTTTATATTGATGATAAATTATGAATGTAATAATATGATATTTTTTATTGCTGCTAGCTTTTCTTGGACAGTATTGAAATTCAAGTTAGAATTAAAGATATTGAAAGTGATATGGTAAAGTATTTATGAGGTTAAAAGAAAAAAATAAGTATTAAAAAAATAATTAAAAACCGTTTAATTTATGTGCAGACATTATTAAATGATAGTGACTTTAGAACAAGTATTTTACATATTTTATTCAGTGTTAACATTTTAAAATTTTTTCCTGTATTTTGATAAGATAAGACACTTTTTTAAAAATACATAAATCTATAAGAATAGATAAGAATATTTATTGTTAAAAAAAGAAGTAAAGTTTAGGTTAAAGAAGAAAATTGGGTCCAGTCAGTGGTCAAAACCGAAGGGCTTTAAACTTGGTTAGTAGCATCTTGTTTAGAAAGTCACCTAGATAAATATAAATATAAATATGAATATAAATAATAATAATAATAATAATAATAGTTTTAACAGAAGTTAGAAGCTTCAGAGTTT


Gene Sequence:
>Vu_10030(-)
GGCGTGGGAGCTTCAAAAGCGAACTGAACCAACGACAGTTAAGCCGAACAAACCTTAGTAGTTCCAAACCAAACCAAAATCATATAACAGAACACAGCACAAAAGAAGAACGACAAGCTCACTTAATTCCTAGTAGTATTACTCACCCACGGTCTCTGTCTGAGACAACACTCAGCCACCAACAAAACGGCGTCACTCTGATCGTGATCAACGTCAAAAATGCCTCAAACGGCTCCTACCGGAGAACCCTCCCACGGAGGCTCCGGTGGCCGCATGGTGGTAGTGGGGGTGAAGATGGACTCCCCCAGCAAGGAATTGCTCACGTGGGCTTTGGTTAAAGTGGCTCACCCTGGTGACACCGTGGTTGCTCTGCATGTTCTTGGGAACCAGGGTACCTGGGGAATTTCAGTTCCTTTTTCTTTTTTTTCTTTAAGTTTTTGTTTTTTTAACGTGAATATTGACTGGTGAAATGAGGTTGCGTAGAAACTGTGAATGGAGACGGGAAATCTTCGCTGCTTTCGCTTGTCAAGGCGTTTGACTCTGTTCTTGCCGTTTATGAAGGATTCTGTAACTTGAAACAGGTTCAATTTCTGAATCTTCGTTCTCTGTGTAGACCCTTTTTAATTTCTATAAACAAAAGCGTAATTTTGAAGTTTGTAGAAGTGATTCTTGTTTGAAGTCCCTGAACAAAACATACTAAATTTTATGCTTTTTGTTTTTTTGTTAGGTCGACCTCAAACTCAAAATTTGCCGTGGTTCATCAGTGAAGAAAATTTTGGTTCGAGAAGCAAATGGTTACACGGCAACTCATGTTGTGGTCGGAACAACTCATGGTTTGCATAGAATCCGGTCATCTACTTTTATAGCTAAATACTGTGCTAAAAAGTTGTCCAAGGATTGCTGTATTCTCGCTGTTAACAATGGGAAAGTTGTGTTCAAGCGTGAGAGCTCGCCACCGAGTGTTGACTTACAAGGTGTCAGATTGTTCTTAGTTTTGATTGTTGGCATTCTCACGGGCACGGCAGAATTCTCAGGCTTGAGTTTGTTTTGCAGGGATTGATCGTCAGCACAGAAATGGTTTGATCGGTTCGATTCATTGGACACTCAGTAAGAATACAAAAGTTCTAAGTGATGACAATTCAGGGACGGATGCTGATGAGAAGAAACCTGGCCAAAGTTCAGATCACAGTTTAGCTAAGTTTTTCCTAGATTCTACAGAAACTGTTAGAAAACCGAACTGTTCAATTTGTGGCACAACCTTGGCATTGCCAGACCCTTCTTGCAACCAATCTGAAGAAGGGTTTTCTGGTGATGATGGTAAAGAGAATTCCTTGGCTATAGTACCAGTGCAAGTGCAACCTACTGTTGCTGCAGAAACGGAATTGAAACCTGGTTGGCCACTACTACATCGGAGAATTATATCGGACACACAATCTACTGATAGATCATTGATGCACCCCAAGATTTCCGTGGTCCAGTGGGCAATGAGGTTACCTTCTAGAAATATTTCATATGCTTCAGATCGTGATGAAAAACCTGAAAGTTGTGATCAAAGCCTGGATCAACCTGCGGCTTTAGATAGGGAAAGTGGTGCTCTTGTTCCAATAGATTCTGAAATCGGAACTGCTTCTTCGCCAGAAAGCAATTCAAGAAACATTCCTAAAGAATTGGAGGGCCTTCACGAGAAGTACTCCTCAACTTGTAGATTGTTTGGGTACCAAGATCTTGTATCTGCCACATCAAATTTCTTACCGGGTTTGTATCCTAGTTAGTTTGACTTAGTTCAATGTAACAAACTGGGTGGTTTTTCTTTAATGTGGTCACTAATGTGATTTCAGAAAACTTTATTGGGAAAGGAGGAAGCAGTCAGGTTTTTAGAGGCTGCCTTTCTGATGGCAAGGAACTTGCTGTCAAGATTCTAAAGCCTTCCGAAGATGTATTGAAGGAATTTATTCTGGAAATCGAAATCATCACTACCTTGCATCACAAAAACATAATTTCCCTCCTGGGATTCTGCTTTGAGAATGGCAAATTTCTTCTGGTTTATGATCTCTTATCAAGGGGAAGTCTTGAAGAGAATCTTCATGGTACGCAAATATACATTTTCTATATATATATATATATATATATATGTATCCCCTTTTGTTTTTCTATGTGGCTTGTTATTGACTTCCTTCTATTCCTTGCCAAAATAGGTAATAAGAAAAAATCACTTGCGTTTGGTTGGTCGGAGAGATATAAGGTAGCTGTGGGTATTGCTGAGGCTTTAGATTATCTGCATTCTAAAGACGATCAACCCGTGATCCATCGGGATGTAAAGTCATCGAATGTGTTATTATCCGAGGATTTTGAACCCCAGGTATTTATCTTTTGATCACTTTTTAGTTCAACATATTCTGTATTATTGAGCCTCATGATCTGCTTGATTTTCTTCAGCTCTCTGATTTTGGACTGGCAAAATGGGCATCAACCTCGTCATCACAAATAACCTGCACAGATGTTGCTGGAACCTTTGGGTTTGTACATTTAAACCCTGCATAACCATGCCAGAGAGAGAGAAAATACATTTGAAATGGTCCTAAATTATTTTTATGTATTGTACTTATCATGCAGTTACTTGGCTCCTGAATACTTCATGTACGGCAAAGTAAATGATAAGATTGATGTTTATGCATATGGGGTGGTGCTCCTCGAACTTCTTTCGGGGAGAAGGCCCATAAACCGTGATTATCCTAAAGGCCAAGAGAGTCTTGTCATGTGGGTATGTTTCTGTAGGCCTATGCTATGGCATCACCTCAAATACTTCTATTTCCTAATCATATGTGTTGTGAAAAAATATAACAGAAACGCACTTTCGCAGGCAGGTCCAATTCTAAATAGTGGAAAGGTGTTACAATTGTTAGATCCTAGTTTGGGTGATAACTATGATCATGAGGAGATGGAAAAGATGGTGTTGGCAGCCACACTGTGTATCAAACGTGCTCCAAGGGCTAGGCCTCAAATGAACCTTGTAAGTGGTCCACTTTTGACTTTACTGCATATTGTGGAATCTATGTCATATCATATATAATACTAATAGACTCATTCGTTGCATATGGAGTGTAATTTCCTGGACAATGACCTGAATGTTTGCCTTTTGCTTATCCTAAATCCTGTGGTACATATCTTGATAGTGCACGCCACAACTTTATCTTCTTGTTTGATTGCCGTAGAAATATTCAGAGAATTAGTCCTTAGTTGAAAATGTGATGCATTGATTATATTGGACCACAGATCTTAAAGCTCCTTCAAGGTGACATTGAAACAATGAAGTGGGCAAGGTTAGAAGTTAACAATGGTTTGGATGCAGCAGAAACGGTTGATGATGAAGCGTGTCCACCTAGTGATAATCTGCAGTCACATATAGATCTTGCACTGCGTGATGTGGTGGAGGAGTCACTCTCCATGTGCAGTGTTGAGCAGGGTTTGACATTGGAGGACTACTTGAGAGGCCGTTGCAGCCGTGCATCAAGCTTTGACTGAGCAAATCACTAGCAAAATGCTAGAAGAAGCTCTATGATTTTTATTTTTTCATGACTTGATCTTTTTGGAGATTAAGTCTTCTTTGGGTTTTGAATGGATTTAGGATGAGAGGTTGTTTGGGTGTGCCCTCCTCCTATACTTAATAACGAGGAAACTAGGCCAGTTCCACCTTGTCACTCTATTTTCTCTGGTTTTTTCCACGATCTCAATTTGATCAAGTTTTGTAATATATATTGGTAAAGAGATGAACAAGTTGTATTTTAGAGCGTAAGGATCATTGCTCTGCATCCAATCCAAATTAGGCTACAGCAACTTCCTCCCT