Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_10014 LG2 39384543 39387342 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/T 39385170 missense_variant p.Gln539Lys
C/T 39385175 missense_variant p.Gly537Glu
C/T 39385246 synonymous_variant p.Lys513Lys
G/A 39385281 stop_gained p.Arg502*
C/A 39385350 stop_gained p.Gly479*
G/A 39385359 synonymous_variant p.Leu476Leu
T/A 39385384 synonymous_variant p.Pro467Pro
C/T 39385478 stop_retained_variant p.Ter436Ter
A/G 39385479 stop_lost p.Ter436Argext*?
T/A 39386118 upstream_gene_variant
C/A 39386130 upstream_gene_variant
T/C 39386137 upstream_gene_variant
T/G 39386175 upstream_gene_variant
G/A 39386497 synonymous_variant p.Leu282Leu
T/G 39386556 missense_variant p.Lys263Gln
T/A 39386667 stop_gained p.Arg226*
A/G 39386974 synonymous_variant p.Thr123Thr
T/C 39387079 synonymous_variant p.Leu88Leu
G/A 39387161 missense_variant p.Thr61Ile
G/C 39387309 missense_variant p.Leu12Val
A/C 39387314 missense_variant p.Val10Gly
T/C 39387317 missense_variant p.Lys9Arg

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_10014.1
MASARDSTKVVLVACLVMISAASQTIRPSCQKKCGSVSIPYPFGTTEDCYMNSNFYVACNTSHRPPKLFLWNVTKNIEVLELSLNGHLRVKSPVAYVCYDEKGVLVDSGNSSMTLKAFPFSYTQNKFVGIGCDTLSTINATIGKNYSAGGCFSLCSSVESSTNGSRFGIGFCQTSIPKNILAYEARVLRSNMLHRDMNIPCSYSLLVEEDSFEFSTDDFIKLQKRRTVSTVLDWAVGNLTCEEAKNNLTSYVCQENSVCIDSKNGPGYLCGCLEGYVGNAYLQGGCQDIDECANPSLNDCSDICINLPGSYNCSCPKTRKHQGDGRKGGSGCVSNLQHVVNEIVIGTGIGLVLLLTGSGWLYHIFRKRKRASLSARYFKRNGGLMLEQQISKMEGSSERAKIFTARELKKATENFHESRIIGRGGYGTVYKGILPNDQVVAIKKSKLVDHSQIEQFVNEVVVLSQINHRNVVKLLGCCLETEMPLLVYEFVNNGTLFDHIHNENTTLPWETRLRIAAETAGVLAYLHSSASIPIIHRDFKSTNILLDDKYTAKVSDFGTSRLVPRDKCQLTTLVQGTLGYLDPEYFQTSQLTEKSDVYSFGVVLAELLTGRRALSFDMPEEERNLALYFLSAVKDDYLFQIVEDFVNEGNSEQVKEVSNIAQWCLRLRGEERPTMKEVAMELESLKTMTVTTSLINATSNAAEYVIGERSGSAERDTDNCHYTYAIRAGPEDDTICNDVMSPLWDGR*


CDS Sequence:
>Vu_10014.1
ATGGCTTCAGCACGAGACAGTACAAAAGTTGTGCTAGTTGCTTGCTTAGTAATGATCTCAGCCGCGTCACAAACAATTCGTCCGAGCTGCCAAAAAAAATGTGGAAGCGTTAGCATTCCGTATCCATTTGGTACAACTGAGGACTGTTACATGAACAGCAACTTTTATGTTGCTTGTAACACAAGTCACAGGCCTCCCAAACTATTTCTGTGGAATGTGACAAAAAATATTGAGGTATTAGAGTTGTCATTGAATGGCCATTTACGGGTAAAATCCCCAGTAGCGTATGTCTGCTATGATGAAAAGGGTGTGCTAGTGGATTCAGGGAATTCATCTATGACTTTGAAAGCATTCCCCTTCTCCTACACTCAAAACAAGTTCGTAGGAATTGGATGCGACACCCTTTCAACCATCAATGCAACAATTGGGAAAAACTACTCTGCTGGAGGGTGTTTCTCTCTTTGTAGTAGTGTAGAAAGTTCAACCAATGGATCCCGGTTTGGCATTGGTTTCTGCCAAACCTCCATCCCAAAAAACATTTTGGCATATGAAGCTCGTGTCCTGAGATCAAATATGCTTCATAGGGATATGAATATTCCTTGTAGCTACTCTCTTTTGGTGGAAGAAGACTCTTTCGAGTTTTCCACGGATGACTTCATCAAACTGCAGAAGAGAAGAACAGTTTCCACAGTGCTTGACTGGGCTGTTGGGAATCTAACATGTGAAGAAGCTAAGAATAATTTGACTAGTTATGTTTGCCAAGAAAATAGCGTATGTATTGATTCTAAAAATGGACCCGGGTATCTCTGCGGATGCTTAGAAGGTTATGTGGGAAATGCATACCTCCAGGGTGGATGCCAAGATATTGATGAGTGTGCCAATCCGAGTCTAAATGATTGTTCAGACATTTGCATTAACCTACCCGGGAGCTATAATTGTTCTTGTCCCAAGACCAGGAAGCACCAGGGAGATGGCAGAAAAGGAGGAAGTGGCTGTGTCTCGAATCTACAACATGTGGTTAACGAGATTGTGATAGGAACTGGCATAGGCCTTGTGCTGTTGTTAACTGGTAGTGGTTGGCTATACCATATATTTCGTAAAAGAAAACGGGCGAGTCTCTCAGCACGATATTTTAAGAGAAATGGTGGCTTAATGTTAGAGCAGCAAATTTCAAAGATGGAGGGATCATCTGAGAGAGCTAAAATATTTACTGCAAGAGAGCTGAAGAAAGCCACTGAAAACTTTCACGAGAGCAGAATCATTGGCAGAGGAGGCTACGGCACAGTTTATAAGGGAATTCTTCCAAATGACCAAGTTGTTGCCATAAAGAAATCAAAACTAGTAGATCACAGCCAAATTGAACAATTTGTCAATGAAGTGGTTGTACTTTCCCAAATTAACCACAGAAATGTGGTCAAACTCCTAGGCTGCTGTCTGGAGACAGAAATGCCACTGCTAGTTTATGAATTTGTGAACAACGGAACACTCTTTGATCACATTCACAACGAAAACACCACACTTCCCTGGGAAACACGTCTAAGAATAGCAGCAGAAACAGCTGGTGTGCTTGCTTACTTGCATTCTTCAGCTTCCATACCGATCATCCATAGGGACTTCAAGTCAACTAACATACTCTTAGATGACAAATACACGGCTAAGGTTTCTGACTTTGGAACCTCTAGATTGGTTCCACGTGACAAGTGTCAGTTGACAACATTGGTTCAGGGAACTCTTGGGTACCTTGACCCTGAATACTTTCAGACCAGTCAACTAACTGAGAAAAGTGATGTGTATAGTTTTGGTGTTGTACTTGCTGAGTTGCTAACTGGAAGAAGAGCACTTTCGTTTGACATGCCAGAGGAGGAGAGGAATTTGGCGTTGTATTTTCTTTCGGCTGTGAAGGATGATTACTTGTTCCAAATTGTTGAGGATTTTGTCAATGAGGGAAATAGTGAGCAGGTGAAGGAAGTTTCTAACATTGCTCAATGGTGCTTGAGGCTTAGAGGTGAGGAAAGACCTACCATGAAGGAAGTTGCTATGGAATTGGAAAGTCTCAAAACCATGACAGTCACAACTTCACTGATTAATGCCACATCGAATGCAGCAGAATACGTTATCGGTGAAAGATCAGGTTCAGCAGAAAGAGACACTGATAATTGTCATTATACTTATGCTATACGTGCTGGACCTGAGGATGATACCATTTGCAACGATGTGATGTCACCGTTATGGGATGGTAGATGA


Promoter Sequence:
>Vu_10014::LG2:39387342-39389342(-)
GGCCAACATGGGCCCAACATCAAGAATGACAAACCCAAATCAAAGGTCGAGACAGACTGGTTTGACCAAAGGTCTAGATAGGCTGGTCGAGACTGAAGGTCAAGAGATCGGAGTAGAAGGTCAAGAAGAGCGAGGCCGGACCGAAGGTAAAGAAGGGCATATATGGGCTAAATGGTGAAATGGGTTAGGTCATGCCAAAAGTAGAGACGGGTCGAGTCAAGCTAAATGGTGAGAGAGACTGACCTAAGACAAAGGTCGAGATGAGTCAGTTTGGGACGAAGGTCAAAATCGGCTGGCCTAGATAGAAGGTCTTGGCAAGTTGATCTAGACCAAATGTCGAGACATAATGGCCTTAATTGAAGGTTGAGACAAAGTGACTTAGACCGAATGTCGAGGCGGGCTAGTTTAGACCAAAGGTTTAAATGAGCCAACGTAAACTAAAGATTAAGACAAACTGAACCAGACTTTAGGTTAAGATATGTCAACCAAAGTAGAAGGTCAAGCCAAATTGGTCGGACCAAAGGTCAAGATGGGTCGACATTGACCATAAGTTGAGGACATGGACTGAAAGGCGAGACGGGTAGCTCATGTCAAAAGTCAAGCTGAAAGTATCATTTAACATTAATTCATCGTGTAATGGACGTTGAAGACTCATAAAAATAAAAGGTTAATATCGCGTATGCAAGCACTCGATATTAAAAGTACTATTTAACATCAGATCTTATATAACCGATGGTGAATATTTAGTTTAGTACTACTTCACTTCTAAGACCAATCCTTAAATAACAAGTATTATAAGACATCATGCTTTCATCTTTCTATAATAGTGAAAATTGTAAGATGTAAACGCATATTGTTTTGCCAACAACCAATATGTCTATCATCAAACCTTTTAAGTTTGATCATATTAGAAGCCATCTCTTTAGAGTCACACGTGTTACTGTTAGAGTGTGAACCTAAATGGTTTGTTGCTTCAAATTTATGTAATAACTCCACAATAATAAAAAAATATCAGAGAAAATAATTAAGAATTCAATAACAATTAAAATACACAATCTTGTAAAACGTGTGTAACACCAATTTTTAGAGTCAATTTGTATCCACGTCTCGAAAACATTTTAATGCTATATATGACGGTGTCTTGGAACATTCCTTTTAGAATACAATGAAGTTCCTCAACATGGTTGGCATACTCACAATCAAGCATGTTGTTAAAGGAACTTTATAGAAAATTAGGTCTACTTGAGCGCTAAGAGAGAAAGTAATGTAAATACGAAGAATCAATTTTACAGCATGACTATGTGTCCTGTCTCCTTTTGAGCTACTATTATTTACCTGTGTATTAATCATATACCAACACATATCTTTTTCTATGTCGAGCCCAAACATTTTTCTCTTTTGTATTGGACCGTAAGACGAACTCACCTTAGACAGACTCACCTTAGACAGGAAAGCAACTGAACTGGTGAATTACCTTGAAAACTTGGAATCCTAGAATTCATTTTTCTTTTTCCCCCGAAAGGCCAATGTTTGAAATAGCAACCGCCTCTTAAATTTTATAGGACTACGGAACAATACAAGAATTCAACGTTGCCTTTACCATATTACCAAAGGATATTAAACTTCTCAGATGACCTTTGCTGACTCCAAAATACACTAGAGAAAAGTTTCAGCCCCGGTCCCCCACTCTAGTCGTTTATCAATATAAAAACTTTGCGCAATCACTAATCCAGTTCTTATCTGTAATGTTAACTATCCACGACAATGATTCTTCTAGTTCTCTAAAAGAAAAATAGAATTGTAGGTCCAATAGAATCCTTGTTAAGAAGGTATCAAAGACATATTTATTCTCCTAAACCAAAAGACAAATCCAACTATAGTTAAAAACGAAGTAACAATGGAAGCTTGACTTCTACGGCCTAAGGTTTGAGCAATTCAAATCTTTTGGCCGAGTTAGCTGTTGCTTAATCTCAGTTTTTGATGATGAATTGCATACAGCA


Gene Sequence:
>Vu_10014(-)
ATGGCTTCAGCACGAGACAGTACAAAAGTTGTGCTAGTTGCTTGCTTAGTAATGATCTCAGCCGCGTCACAAACAATTCGTCCGAGCTGCCAAAAAAAATGTGGAAGCGTTAGCATTCCGTATCCATTTGGTACAACTGAGGACTGTTACATGAACAGCAACTTTTATGTTGCTTGTAACACAAGTCACAGGCCTCCCAAACTATTTCTGTGGAATGTGACAAAAAATATTGAGGTATTAGAGTTGTCATTGAATGGCCATTTACGGGTAAAATCCCCAGTAGCGTATGTCTGCTATGATGAAAAGGGTGTGCTAGTGGATTCAGGGAATTCATCTATGACTTTGAAAGCATTCCCCTTCTCCTACACTCAAAACAAGTTCGTAGGAATTGGATGCGACACCCTTTCAACCATCAATGCAACAATTGGGAAAAACTACTCTGCTGGAGGGTGTTTCTCTCTTTGTAGTAGTGTAGAAAGTTCAACCAATGGATCCCGGTTTGGCATTGGTTTCTGCCAAACCTCCATCCCAAAAAACATTTTGGCATATGAAGCTCGTGTCCTGAGATCAAATATGCTTCATAGGGATATGAATATTCCTTGTAGCTACTCTCTTTTGGTGGAAGAAGACTCTTTCGAGTTTTCCACGGATGACTTCATCAAACTGCAGAAGAGAAGAACAGTTTCCACAGTGCTTGACTGGGCTGTTGGGAATCTAACATGTGAAGAAGCTAAGAATAATTTGACTAGTTATGTTTGCCAAGAAAATAGCGTATGTATTGATTCTAAAAATGGACCCGGGTATCTCTGCGGATGCTTAGAAGGTTATGTGGGAAATGCATACCTCCAGGGTGGATGCCAAGGTATGGATTATGTTCCCTCCATGTGATTAGTCTAAATGTAATTTGTTTTCTTGATAAATGAAAGAAATATTAACTTCTTTTGCCTATTTCTTCACTAGATATTGATGAGTGTGCCAATCCGAGTCTAAATGATTGTTCAGACATTTGCATTAACCTACCCGGGAGCTATAATTGTTCTTGTCCCAAGACCAGGAAGCACCAGGGAGATGGCAGAAAAGGAGGAAGTGGCTGTGTCTCGAATCTACAACATGTGGTTAACGAGATTGTGATAGGTACGTGTTATTTGTTTGGTTTACATAGTAGTAATCAGTGAAAAGAAGATAACAAGACAAATACAAAAGTAAAGCAAGGCATATGTAAAAACGTGCATTTTGCTCCATTATTTTTGAGATATTTGATCTGTTTGATTTTATTTTCTTTCACTTGTAGTCTACTGATTTGTCTTTTTGATTGCTTTTACGCTAAAAGTTTTGACGTTTTGCAACTTTATGTCAGTACATATTCCATAGGGGAAATCTTAATTCACAGCTCTCCAAATCTTAGAAATAGAAGTGACATTTGTTTGCAAGTAGATGGTATGGAGTGTCATGAATAGTATCCGCTACCGAAAATAAAGTTATAGGGAAAGTGACCTTTAAATTAAAGTAATTCGAGGATGTACGTGAATGACATGATTCCGAAACCATAACAAAATTAAAGACTGATCCAATAAGCAACTTTTTCAATGTAGGAACTGGCATAGGCCTTGTGCTGTTGTTAACTGGTAGTGGTTGGCTATACCATATATTTCGTAAAAGAAAACGGGCGAGTCTCTCAGCACGATATTTTAAGAGAAATGGTGGCTTAATGTTAGAGCAGCAAATTTCAAAGATGGAGGGATCATCTGAGAGAGCTAAAATATTTACTGCAAGAGAGCTGAAGAAAGCCACTGAAAACTTTCACGAGAGCAGAATCATTGGCAGAGGAGGCTACGGCACAGTTTATAAGGGAATTCTTCCAAATGACCAAGTTGTTGCCATAAAGAAATCAAAACTAGTAGATCACAGCCAAATTGAACAATTTGTCAATGAAGTGGTTGTACTTTCCCAAATTAACCACAGAAATGTGGTCAAACTCCTAGGCTGCTGTCTGGAGACAGAAATGCCACTGCTAGTTTATGAATTTGTGAACAACGGAACACTCTTTGATCACATTCACAACGAAAACACCACACTTCCCTGGGAAACACGTCTAAGAATAGCAGCAGAAACAGCTGGTGTGCTTGCTTACTTGCATTCTTCAGCTTCCATACCGATCATCCATAGGGACTTCAAGTCAACTAACATACTCTTAGATGACAAATACACGGCTAAGGTTTCTGACTTTGGAACCTCTAGATTGGTTCCACGTGACAAGTGTCAGTTGACAACATTGGTTCAGGGAACTCTTGGGTACCTTGACCCTGAATACTTTCAGACCAGTCAACTAACTGAGAAAAGTGATGTGTATAGTTTTGGTGTTGTACTTGCTGAGTTGCTAACTGGAAGAAGAGCACTTTCGTTTGACATGCCAGAGGAGGAGAGGAATTTGGCGTTGTATTTTCTTTCGGCTGTGAAGGATGATTACTTGTTCCAAATTGTTGAGGATTTTGTCAATGAGGGAAATAGTGAGCAGGTGAAGGAAGTTTCTAACATTGCTCAATGGTGCTTGAGGCTTAGAGGTGAGGAAAGACCTACCATGAAGGAAGTTGCTATGGAATTGGAAAGTCTCAAAACCATGACAGTCACAACTTCACTGATTAATGCCACATCGAATGCAGCAGAATACGTTATCGGTGAAAGATCAGGTTCAGCAGAAAGAGACACTGATAATTGTCATTATACTTATGCTATACGTGCTGGACCTGAGGATGATACCATTTGCAACGATGTGATGTCACCGTTATGGGATGGTAGATGA