Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_10009 LG2 39347725 39350748 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/A 39347888 missense_variant p.Lys557Met
C/T 39347966 missense_variant p.Cys531Tyr
A/T 39347967 missense_variant p.Cys531Ser
G/A 39348083 missense_variant p.Ala492Val
T/A 39348182 missense_variant p.Glu459Val
C/A 39348397 intron_variant
G/A 39348524 intron_variant
G/A 39348618 synonymous_variant p.Thr426Thr
C/T 39348818 intron_variant
A/T 39349008 intron_variant
A/G 39349092 intron_variant
A/T 39349603 splice_region_variant&intron_variant
C/T 39349721 intron_variant
G/C 39349929 missense_variant p.Leu274Val
T/C 39349932 missense_variant p.Lys273Glu
G/T 39350033 missense_variant p.Pro239His
A/C 39350037 missense_variant p.Phe238Val
G/C,A 39350171 missense_variant p.Ala193Val
C/A 39350178 missense_variant p.Ala191Ser
T/G 39350185 missense_variant p.Leu188Phe
T/G 39350188 missense_variant p.Glu187Asp
C/T 39350190 missense_variant p.Glu187Lys
G/A 39350250 missense_variant p.His167Tyr
T/C 39350258 missense_variant p.Asn164Ser
G/T 39350265 missense_variant p.Leu162Ile
T/C 39350267 missense_variant p.Asp161Gly
G/C 39350301 missense_variant p.Pro150Ala
T/C 39350307 missense_variant p.Thr148Ala
C/G 39350309 missense_variant p.Arg147Thr
C/T 39350312 stop_gained p.Trp146*
A/G 39350313 missense_variant p.Trp146Arg
A/G 39350315 missense_variant p.Phe145Ser
A/T 39350320 missense_variant p.Phe143Leu
T/G 39350324 missense_variant p.Tyr142Ser
G/T 39350326 missense_variant p.Asp141Glu
C/T 39350381 missense_variant p.Arg123Gln
G/T 39350382 synonymous_variant p.Arg123Arg
A/G 39350383 synonymous_variant p.Ser122Ser
C/T 39350389 synonymous_variant p.Leu120Leu
A/T 39350406 missense_variant p.Tyr115Asn
C/G 39350410 missense_variant p.Arg113Ser
A/T 39350415 missense_variant p.Phe112Ile
A/G 39350423 missense_variant p.Phe109Ser
G/A 39350435 missense_variant p.Ser105Leu
C/T 39350519 missense_variant p.Arg77Gln
G/T 39350520 synonymous_variant p.Arg77Arg
A/G 39350729 missense_variant p.Leu7Pro

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_10009.1
MVKQLLLVVFLTAAAAAAKAHPVTKPNCPTKCGNVSIPFPFGLTKLCSLNTSFLITCNKSLSPPIPFLNTTNNEKVRVLDISLDGQLHVSLPVATSCVNNKNGESDKDFFFFRLYTPFHLSSRQNKLTVLGAYTAGVVYDDYFRFWRTYPPTYCVSFYSSDLYNKTHDESCSGTFCCETPIQHRLSELYYACAANIFDYNSTRREFLSYPCGYTFLAKEGAYNFSMSDFINFNTSNTFPVVVDWAVGNRCPAAKKNASSYACKSKDSECHNAKLGPGYHCNCSTGFRGNPYLLDGCQDIDECTEESHNCLKGKSKCINSPAGSYTCSCLKGYGDGKINGSRCVTKSNRKIIIAFSVSGSILALMGGTLYMYSGSNELTKIFTVKELKEATNNFNEEMVLGKGGEGTVYKGILPDNRIVAIKRSRVSNPNQTEHFINELTTLVLGTLGYLDPEYFHSSQLTEKSDVYSFGVVLVELLTGKKALSFERPEAHRNLAIHFHSSMKEGRLLEIFDDRIIDEANVEQLMDVVNIASHCLRLKGEERPTMREVAMQLEGINIVEKHQWENVNLSLENAESILKATPSSSFSVDGVNNISMHSGSDVLNQISFSLTRGR*


CDS Sequence:
>Vu_10009.1
ATGGTAAAGCAGCTTCTACTTGTTGTGTTCCTCACTGCTGCAGCAGCAGCCGCTAAAGCCCATCCAGTGACAAAGCCAAACTGCCCAACAAAGTGTGGGAATGTTAGCATTCCCTTTCCCTTCGGCCTGACTAAGCTATGTTCTCTCAACACCTCATTTCTCATCACTTGCAACAAAAGCCTTTCACCACCTATTCCATTCTTGAATACTACTAATAATGAAAAGGTGCGGGTGCTGGACATCTCACTCGACGGCCAACTTCACGTTTCATTGCCAGTTGCCACAAGTTGTGTCAATAACAAGAATGGTGAATCAGACAAGGATTTCTTTTTCTTCAGGTTATACACACCTTTTCACCTGTCATCTCGGCAAAACAAGTTAACTGTATTGGGCGCTTACACGGCAGGAGTAGTATATGATGACTATTTTAGATTCTGGAGAACATACCCTCCCACTTATTGCGTGTCCTTCTACAGCAGCGACCTTTACAACAAGACACATGACGAGTCATGCTCCGGCACTTTCTGTTGCGAGACTCCAATTCAACATAGGCTATCGGAATTATACTATGCTTGTGCTGCAAATATCTTCGACTATAACTCAACCAGAAGGGAATTTCTGTCCTACCCATGTGGTTATACATTTCTGGCTAAGGAGGGAGCCTACAATTTCTCCATGTCAGATTTCATCAATTTTAACACAAGCAACACGTTTCCCGTGGTTGTGGATTGGGCAGTGGGGAACAGGTGCCCAGCTGCAAAGAAGAATGCTTCAAGCTATGCGTGTAAGTCAAAGGACAGTGAATGTCACAATGCAAAGCTGGGACCTGGTTACCATTGTAACTGCTCCACTGGTTTTCGAGGAAATCCTTACCTACTAGATGGTTGTCAAGATATTGATGAATGCACTGAGGAATCCCACAACTGTTTAAAGGGGAAATCAAAATGCATCAACAGTCCAGCAGGGAGTTACACTTGTTCTTGTCTAAAGGGATACGGCGATGGCAAGATCAATGGAAGCAGATGTGTTACCAAGAGTAACCGCAAAATAATAATTGCTTTCAGTGTGAGTGGAAGTATATTGGCACTTATGGGAGGAACCTTATACATGTACAGTGGATCAAATGAATTGACAAAAATCTTTACTGTGAAAGAACTAAAAGAGGCCACCAACAATTTCAATGAAGAGATGGTCTTAGGCAAAGGTGGGGAGGGAACAGTTTACAAAGGAATATTACCTGACAATAGAATTGTAGCAATAAAAAGGTCCAGAGTTAGTAACCCAAACCAAACTGAGCATTTCATCAATGAGTTAACAACTTTGGTGTTGGGGACACTAGGGTATCTTGACCCAGAATACTTCCACTCAAGCCAGTTAACAGAGAAAAGTGATGTCTACAGTTTTGGAGTTGTCCTAGTCGAACTACTAACAGGAAAGAAGGCACTCTCTTTTGAAAGGCCAGAGGCTCATAGAAACCTAGCGATTCACTTCCATTCTTCAATGAAGGAGGGTCGGTTACTTGAAATTTTCGATGATCGCATAATAGATGAGGCAAATGTTGAGCAACTAATGGATGTTGTAAACATTGCAAGCCATTGTTTAAGGTTGAAGGGGGAGGAAAGGCCCACCATGAGAGAAGTGGCAATGCAACTTGAAGGAATCAACATTGTGGAGAAGCACCAATGGGAAAACGTGAACTTGTCATTAGAGAATGCTGAATCTATTCTCAAAGCAACACCATCATCTTCTTTTAGTGTAGATGGTGTTAACAACATAAGCATGCATTCTGGCTCTGATGTTTTAAACCAAATTTCCTTCTCCTTAACTAGAGGAAGATGA


Promoter Sequence:
>Vu_10009::LG2:39350748-39352748(-)
CAAAATATCCAAATATATGAACTTAACTAAGCATTTATTTAATAAAGTACGGAATATTCATATTGCATATTGCAAATTCCAATTTTAATTTTTGCGATATCAAAGTCGACTTTACTATGTCCATTATTTTTCAAATACGGGACTTTGACTTTTTTTTAATATGTAACATGAAGTTATTTCTCATATTTTCTTTTTTCTTTTTGTTTATTTTCCAGAAGATACATTATATATATTTTTTTCACAAAATGTAAAAAAAATAAATTAAAAATACAAAAAGAAATTACAATTCACTAGTACAAAAACAGTGTATAACATTAAAAATGAACGATGACATTTTTGTAAATAAATTCAATTATTAAACGTCGTTTAGAATTGTAATTTGACGCAAAAGATATAAAACTTCAAATGACTTTTAAATTCGACATCAAAATGTTAATAAATTCAATAAAATTTAAGCGGGAGAATGAAAATTCATTCATTTTGTCAGTGAATTCAATGAAAATTTGAGTGGGAGATTGAAAATTTATTCACTTTATCTTAGCGCGCGATACCTCTTCTCTTCTCAAACTTTTCTCAAACGAAGTTTGACGAGTAACACATGTAAATTTTCTTTCATTTGATACAAATGCATGTTAATTAATTACTTTATGTAATTATTTTCATGCTCTTGTCCTTCGTAGAGGCATTCTGTTTTCTCTCTCACCGGTGACGAAACTTTATTCCGACCAACCCGCCTTTTGAATGTTAGTTTTCTTTTTCGTTTTGAAGAACTTATTTGTTGAACTTGTTTGTTGTTTTTTTGTTGAACTTATTTGATGTTGTTGTTTAGTTAAACTTGTTTGTTCTTGTTATTTGATTGAACTTGTTTGTTGTTGTTGTTTGATTAAACTTGTTTTTTGTTGGTTATTATTGTTTGTTGTTGGTACTACACTACACGTTTATAGTTCATGCTTTATAAAATACCAAAAACTGAAATTTGTGTTATTTTTTTGTTTTTTCAGGTATCGTAGAGTTGTAAAAAAGGAACACACTTAATTAAAAAAACAAAAAAAAATTGATTAACGTCGAATATTGACAAAATTCGAGTTAAGTTAACGTCAAATTTTTTAAATTCTACGTCAAACTTACGTCTCCTGCTATGACGTCGAACTCGAATGTGTCGTTAAAAAACAAAAATATTCGACATTATATGTTGTTTTTGTACTAGTGATTTTATGGTTTAAGAAAATTATAGAAACTTTAGCTCATCTAAAAGAAATATATTACTTAGGGATTACAATTTCTTTATTATGTATAAACAGTTTTTTTTTAATTATGATTTTCGTTCCAATAAAAATATTTTTTTTTGTTTACTTGGAAGTGATTCATTATTTTATTTATGAACATGAGTAGCAATTGGTATTTCTTAGTGTCATCGCGGTGTGTATGTGAAGGTCAAGAATAAAATTTGAAATCGGATATCATTATAATTTTGGAAGTAGATGAAATTGAATTTCATAAATATTGTAAATGAGTTCGAAAAGTGTGTGAGTAGTTATAAATGTCAAGAAGGAAGTAATTTATTAAGGCCACGCACTTATGTGATGTCTGTCTGATTCATGCATGCACTTTTTAGTATCGTTTAACAAAACACAATGTAACTTTAGATTAGAAAAAATATGTATAATTAAATTAGCCTTGGTTTTTAAAATTTACTTTCTAGTTATTTCTCTAATCGTAACTATTAGTGTATACAATAGTGCAACTTAGGAAAATAAATTGAAAGGATCCATCGTTGACCCCGAGTCCTCCCTTCCCTTCCATTATTTTAGTAAAATAAAAAATATTTTTTTCATCATTTGACAACGTTTAATGCATTGTTGGGAAGATCATTGGAAGGGGCAACTTTATCTTATAATTGACCCCAAGTCTTTCTGAGTCATTCATTCCATATATAGTTAGTAAATGATAGGAGCACATACACTCATGATTAAATCAAGTTGAAAGAAAAACAGGTGCAG


Gene Sequence:
>Vu_10009(-)
ATGGTAAAGCAGCTTCTACTTGTTGTGTTCCTCACTGCTGCAGCAGCAGCCGCTAAAGCCCATCCAGTGACAAAGCCAAACTGCCCAACAAAGTGTGGGAATGTTAGCATTCCCTTTCCCTTCGGCCTGACTAAGCTATGTTCTCTCAACACCTCATTTCTCATCACTTGCAACAAAAGCCTTTCACCACCTATTCCATTCTTGAATACTACTAATAATGAAAAGGTGCGGGTGCTGGACATCTCACTCGACGGCCAACTTCACGTTTCATTGCCAGTTGCCACAAGTTGTGTCAATAACAAGAATGGTGAATCAGACAAGGATTTCTTTTTCTTCAGGTTATACACACCTTTTCACCTGTCATCTCGGCAAAACAAGTTAACTGTATTGGGCGCTTACACGGCAGGAGTAGTATATGATGACTATTTTAGATTCTGGAGAACATACCCTCCCACTTATTGCGTGTCCTTCTACAGCAGCGACCTTTACAACAAGACACATGACGAGTCATGCTCCGGCACTTTCTGTTGCGAGACTCCAATTCAACATAGGCTATCGGAATTATACTATGCTTGTGCTGCAAATATCTTCGACTATAACTCAACCAGAAGGGAATTTCTGTCCTACCCATGTGGTTATACATTTCTGGCTAAGGAGGGAGCCTACAATTTCTCCATGTCAGATTTCATCAATTTTAACACAAGCAACACGTTTCCCGTGGTTGTGGATTGGGCAGTGGGGAACAGGTGCCCAGCTGCAAAGAAGAATGCTTCAAGCTATGCGTGTAAGTCAAAGGACAGTGAATGTCACAATGCAAAGCTGGGACCTGGTTACCATTGTAACTGCTCCACTGGTTTTCGAGGAAATCCTTACCTACTAGATGGTTGTCAAGGTCTCTATATTCTCCTCCTTTTAATCATTTTTAATGTCTTTTTATACTTTATAAAATTATCTTTATTATGCACACAACATTAAAACCCTGCTACAAACTTGTTTTGTGTTAAAACATCACTCATTTTGAAACCGAGTGTTAATTATTTCATATTTCATGTTCCAATATACTATTGTTATCAAGTGTACAAATTAATGACAAATTATACATAAATTGTGAACATATTTTTCTTTAAAACTCGTTAATTATCTTTTAGATATTGATGAATGCACTGAGGAATCCCACAACTGTTTAAAGGGGAAATCAAAATGCATCAACAGTCCAGCAGGGAGTTACACTTGTTCTTGTCTAAAGGGATACGGCGATGGCAAGATCAATGGAAGCAGATGTGTTACCAAGAGTAACCGCAAAATAATAATTGCTTTCAGTAAGTATACTTTTATTTGTCAAAACATTCTATTCTCCGTTAAAGAACAACATTAAAAGGGTTTATTATTACAATATAATATTCCTGAAAGAAATTTCATTGGTATAAAAAACGATATTAATAATCTAAACAACATCTTTCTATATACATATGTTTTGTGTTAATTACTATATGCATCTAAATAGATTAACAATATTATATTCATATCACACAAAAAGGGGACGATGACTTTTTGTTTCAGGAATTGTTGAGCCACCACTTCTCTTTATTCTTCTGGTTTTGAATTCTCTTGATATGTTGCTTTCAGTTACGTAATAAATCACTAAATAAAAGCATATTTTCGTTCCACTCACTTAAAAACATATATGACCTCTCCTTTATTTGAATCTTTCCATTCACTAAAATTACAATAGTTTTGTCCTTTGTCTGTATAAGGCGCTTGTTATTAAATGTTTCATCAGCAATTGAGAAAGTAATGGTTTACACTTGTCGATGTTCAGGTGTGAGTGGAAGTATATTGGCACTTATGGGAGGAACCTTATACATGTACTGCACATTAAAGAAAAGAAAACTCAACAAACTTAAAGAACATTTTTTTCAACTAAACGGTGGTTTGTTATTACAACAATATATAGGCAGGTACAGTGGATCAAATGAATTGACAAAAATCTTTACTGTGAAAGAACTAAAAGAGGCCACCAACAATTTCAATGAAGAGATGGTCTTAGGCAAAGGTGGGGAGGGAACAGTTTACAAAGGAATATTACCTGACAATAGAATTGTAGCAATAAAAAGGTCCAGAGTTAGTAACCCAAACCAAACTGAGCATTTCATCAATGAGGTGATTCTGCTTTGTCAAATCAACCATAGAAATGTGGTGAAACTCTTGGGATGTTGTTTAGAGACAAAGGTTCCCTTACTTGTTTATGAATTTGTTCCCAATGGAACTGTTTACGAGCATCTCCACGATCAAAGCAAATCTTTAAGACTTACATGGAAAAGAAGATTACAAATAGCAGTTGAAACTGCTGGGGCCCTAGCATACTTGCATTCTGCTACCCATGCACCAATCATACATAGAGATGTGAAAACTTCAAACATACTACTTGATCACAATCTCACTGCAAAGGTTTCTGATTTCGGAGCTTCAAAGATTATTCCTCTTGATCGAACTCAGTTAACAACTTTGGTGTTGGGGACACTAGGGTATCTTGACCCAGAATACTTCCACTCAAGCCAGTTAACAGAGAAAAGTGATGTCTACAGTTTTGGAGTTGTCCTAGTCGAACTACTAACAGGAAAGAAGGCACTCTCTTTTGAAAGGCCAGAGGCTCATAGAAACCTAGCGATTCACTTCCATTCTTCAATGAAGGAGGGTCGGTTACTTGAAATTTTCGATGATCGCATAATAGATGAGGCAAATGTTGAGCAACTAATGGATGTTGTAAACATTGCAAGCCATTGTTTAAGGTTGAAGGGGGAGGAAAGGCCCACCATGAGAGAAGTGGCAATGCAACTTGAAGGAATCAACATTGTGGAGAAGCACCAATGGGAAAACGTGAACTTGTCATTAGAGAATGCTGAATCTATTCTCAAAGCAACACCATCATCTTCTTTTAGTGTAGATGGTGTTAACAACATAAGCATGCATTCTGGCTCTGATGTTTTAAACCAAATTTCCTTCTCCTTAACTAGAGGAAGATGA