Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_09935 LG2 38454614 38456290 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
Pathway   B 09132 Signal transduction   C 04016 MAPK signaling pathway - plant [PATH:ko04016]
SNP Position Effect Amino acid change
C/A 38454639 intron_variant
C/T 38454700 intron_variant
A/G 38454788 synonymous_variant p.Leu293Leu
A/T 38455327 downstream_gene_variant
C/A 38455351 downstream_gene_variant
G/T 38455354 downstream_gene_variant
G/T 38455427 downstream_gene_variant
G/A 38455560 downstream_gene_variant
T/C 38455561 downstream_gene_variant
C/A 38455583 downstream_gene_variant
A/C 38455640 downstream_gene_variant
C/T,* 38455662 downstream_gene_variant
T/C 38455681 downstream_gene_variant
C/G 38455807 downstream_gene_variant
A/T 38455898 missense_variant p.Phe131Leu
G/T 38456000 missense_variant p.Asn97Lys
A/G 38456024 synonymous_variant p.Thr89Thr

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_09935.1
MDDNLCDIFDDKEFGSDHFGGDDLFAILESLESDFTHFPPINEETVAVSKENEDVSRLVSQKSTSSSAPLDYSETEFETSSKTKRQKLTPTTPEEANPDGQQRMSHITVERNRRKQMNEHLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQALEAKKQRKVYSEVLSPRLVSSPRPSPLSPRKPPLSPRLNLPISPRTPQPGSPYRPRLQQGYNNMISPTMSNSLDPSPTSSANSSINDNINELVANSKSATADVEVKFSGPHVLLKTVSQRIPGQALKIITALEDLALEILHVNINCAADDTMLNSFTIKVP*


CDS Sequence:
>Vu_09935.1
ATGGACGACAACTTATGTGACATTTTCGACGACAAAGAGTTTGGGAGCGACCACTTTGGTGGGGACGATCTCTTCGCCATTTTGGAGAGCCTAGAATCGGACTTCACCCATTTCCCTCCCATTAACGAAGAAACTGTTGCTGTCTCCAAAGAGAACGAGGATGTCTCCAGATTGGTGTCTCAAAAGTCTACCTCGTCAAGTGCTCCACTAGATTATTCCGAAACTGAGTTTGAAACCTCATCAAAAACCAAGAGACAGAAGCTTACTCCTACCACGCCAGAGGAAGCAAACCCGGATGGACAACAAAGGATGTCTCACATCACCGTTGAACGCAACCGGAGAAAGCAGATGAATGAACACTTGTCTGTATTGAGGTCGCTTATGCCTTGCTTTTATGTCAAACGGGGAGATCAAGCATCCATAATCGGAGGTGTGGTTGATTACATCAACGAGTTGCAGCAAGTGCTCCAAGCCCTGGAGGCCAAGAAACAAAGGAAAGTTTACAGTGAAGTGCTAAGCCCTAGGCTGGTTTCAAGCCCAAGGCCCTCACCTCTGAGTCCTCGGAAACCACCTCTGAGCCCGAGACTAAACTTGCCCATTAGCCCAAGAACTCCACAACCAGGAAGTCCTTACAGGCCAAGGTTGCAACAAGGCTACAACAACATGATTTCACCAACCATGTCCAACTCTCTCGACCCTTCTCCCACTTCTTCTGCTAATTCCTCCATCAACGACAACATCAACGAGCTTGTTGCAAACTCCAAATCCGCCACTGCTGATGTGGAGGTCAAGTTTTCAGGGCCCCACGTTCTTCTCAAAACGGTGTCTCAACGAATTCCCGGACAGGCTCTGAAGATAATCACAGCACTTGAAGATCTTGCGCTAGAAATCCTCCATGTCAACATTAATTGTGCTGCTGATGATACCATGCTAAACTCATTCACTATCAAGGTTCCTTGA


Promoter Sequence:
>Vu_09935::LG2:38456290-38458290(-)
AACATTATACTATATGACATAATATAACATTTACCTTTTATGAGATTTAATGACAACTTAACTCTTTCGTTTTTTAAGTTTTGAAATATCAAAATAAATAATATTTATAATACTAACTTATTTTTTTAGCAAGTTCTTACTTTACATTCAAATGAAGTCAATCGCTTAAGTCATCTAATAAGTTCTCAATATCAAACTTAACTTTTACCAACTTTATACATTATTACCCTTTATCAAATATTTTATACTTTACAACGAACTCATATATTAAATTGAATTATTTATAAGAAGATAAAGTCTTATCATTTCAAGATTCGTGAAAATCCATATTAAAAGATTCAATATCGTCTTAAACAAAAACTACTATACTTGTATGATGATATCACGATTAATTTATAATGCAAAACTCTAACACAAATATAGACATTTTTTAAGGGCTTCAACGTCTTACAAATATGGAGAAAACTAGTAATCTAACAAGGTTTACTAAGATTCGACATCTAAGTAAATAAAACAAAGATTACCAAAGTTATTTAGAATTCTTTTCCCCTCGTTAGATTATTAAATCAAACAAATTGTTCACGTGTTTAACATCAATTTATATCCCGTTCATCATTATTAACTAAATTAGTTATATAAAACCAAAAAAATAATGCTCCAAAACTAAACTATTTCCAATATATTATTCAGATACAGCAATATGATATAACTTAATAAAAAAAAATCTCCTAAGAAAAGGGAATATGCAAATGACTGATCAATCTTCAATGATAAGTTCCAAAAACCTATCTCAGTACACAACTCACTAAAAAGAAGTTCAATTTTGAATAAAAACATAAAAACAAATCCTACATGAAAGTTAAAATTCATGGCGGAAAGTGCAAATTAAGGCGATTAACCATCATAATCTAGGATTTTTTTTATCGGTTTTGATAAAGTTTACAGTTGTCTCTAAGTTTTTTTTTATATATAAAAAATATAGAATATTTATGTTAGTATAGCATTATATTTATGTACCCAAACGCGGAATTAATTAATTCTCCCTTATCGATGTGTTTTTATTACAAACTAGTAAACGAGCGGCACCATCCATATCACACAGAAAGACCGGTATTTTTAATGCAAATGACATTCATAAAATGCTGAGAAATTACAGTACTTACCTGCAAAATGGTGTTGAACTTCATTACAAAAAGCATCCAGAAATTTAATGGACATCAATTCAAGTTTAAATAATTCACTGTTCCTTCCCAAATTTTAAAACAATTCAGTGACATATTAATGAAGGAGAGCAGAGGTATTTATGAGTGGAAATTGTAACGTAGAGGTATATTAATGAGTGGGAATTCTAACGTGGATGCGCAGCGATTCTTGACCCCTCTTTCCTGTCCTTAATAGTAAAAACCACACTCTCATTGGCCATATATATGCTCATAACATCAACTGAGAGTGCTTGTAAGAGCCAAATAACTATCTAAAACTTGCATTATATTAACAGTCCAAAAGCAACTATATCATCACTTGTTTTATAGACCACAACACCTTTATCATTACTATGTACTTTAGAATACATGCAAGTTATTCTCCGTTCTCAAGCTCCCTTCTCAAAAATTTTCAGTTTTGAATACTGGCACAGTCTGATACTGCTGTTTCTGTTCTGCTTCGGCTTCAGCCCGTGAGATTGTATCAATCCCTAGGCATCTAACGGTTTAAACCACATCTTTTCAAAAAGGGACCATAACATCAATCAGCAGTAGTAGTTGATGGCGATCGTTTAGTCACTATCACATCAGCACCCCTCTCATATATTTACTCCTTTTCAGTCTTCACTCTCCGCTACCCTTTTCCTTGATCTTGACAAACCTCATTTTGTGTGTCCCTTTCTCACTCCAAACTTTCTCATTCTCTTTCCCACTCAAAGACATTTTTCCGGCTCTTCCGTCGCAGGTTTCCCGGACTCCATCCATCCATCCAATTGGAAACTCCTAAAGCCTCCAAAC


Gene Sequence:
>Vu_09935(-)
ATGGACGACAACTTATGTGACATTTTCGACGACAAAGAGTTTGGGAGCGACCACTTTGGTGGGGACGATCTCTTCGCCATTTTGGAGAGCCTAGAATCGGACTTCACCCATTTCCCTCCCATTAACGAAGAAACTGTTGCTGTCTCCAAAGAGAACGAGGATGTCTCCAGATTGGTGTCTCAAAAGTCTACCTCGTCAAGTGCTCCACTAGATTATTCCGAAACTGAGTTTGAAACCTCATCAAAAACCAAGAGACAGAAGCTTACTCCTACCACGCCAGAGGAAGCAAACCCGGATGGACAACAAAGGATGTCTCACATCACCGTTGAACGCAACCGGAGAAAGCAGATGAATGAACACTTGTCTGTATTGAGGTCGCTTATGCCTTGCTTTTATGTCAAACGGGTACGTCTTTATTTTATTTATATTCACTTTCTTTTACATCTCTTCAACCATCAAGTTTTATCTTGAAAGGTTTTCTTAGAAAAGTAGGATACCGTTTTTTCGACTGTTTTGAGTATTGTTGTTTAATTATCGTTATTTTTTTTTCTCACTAATATGCATAATAAATATTTATTTAAGAGTTACTACGGATTTCTGAAATAAAACACTAATTACTTAACGGAGAGCAACATTAAAAGCTCCTCATGTGACACATTGGTACAGAGTTGCACGTGAGCTGTCTTTTTTAGCGTATAGCTTGCCTTGCGTGTTTAAATTTGAAACAAAACTTTGTTTCATCTTTCAAGCGAGATGATTGAAAATTTAGGGTATTTATTCATTATTTGTTTAAAGTTTTATCTTACAAAAACATAACTTCAAATATATATGGTTACTGGTTTCATATTACAGTGTAAAGTGTTCTTTACAGATTAAATTAAGTGCACCTTGCATTTCTGAATCCCTTATAAATAGATGTTTGTGGTAAAGCTACCACAAGTTTGTTTCCTTGAATTAGTTGACTTTTAATTACATTATTATTTGTAACGTATGAGTATATTAAATTCTTTTCAATGGTTTATGCTTTAGGGAGATCAAGCATCCATAATCGGAGGTGTGGTTGATTACATCAACGAGTTGCAGCAAGTGCTCCAAGCCCTGGAGGCCAAGAAACAAAGGAAAGTTTACAGTGAAGTGCTAAGCCCTAGGCTGGTTTCAAGCCCAAGGCCCTCACCTCTGAGTCCTCGGAAACCACCTCTGAGCCCGAGACTAAACTTGCCCATTAGCCCAAGAACTCCACAACCAGGAAGTCCTTACAGGCCAAGGTTGCAACAAGGCTACAACAACATGATTTCACCAACCATGTCCAACTCTCTCGACCCTTCTCCCACTTCTTCTGCTAATTCCTCCATCAACGACAACATCAACGAGCTTGTTGCAAACTCCAAATCCGCCACTGCTGATGTGGAGGTCAAGTTTTCAGGGCCCCACGTTCTTCTCAAAACGGTGTCTCAACGAATTCCCGGACAGGCTCTGAAGATAATCACAGCACTTGAAGATCTTGCGCTAGAAATCCTCCATGTCAACATTAATTGTGCTGCTGATGATACCATGCTAAACTCATTCACTATCAAGGTACACTTCGAATTGGAACACAAAAGTTAACGGCTAATAATCCTCTTATTTCTTGGAATGCATAACCCTGTGTTCTGTTCATGTTCATAATAGGTTCCTTGA