Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_09814 LG2 36634865 36637956 PREDICTED: growth-regulating factor 2 isoform X2
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, transcription, DNA-templated, regulation of transcription, DNA-templated, response to red light, transcription, DNA-templated, leaf development, response to far red light, regulation of transcription, DNA-templated, transcription, DNA-templated, transcription, DNA-templated, regulation of transcription, DNA-templated, leaf development
Cellular Component   located in   nucleus, nucleus
Molecular Function   enables   ATP binding, ATP binding
SNP Position Effect Amino acid change
G/C 36635437 missense_variant p.Asn461Lys
G/A 36635443 synonymous_variant p.Ala459Ala
C/T 36635499 missense_variant p.Ala441Thr
C/G 36635540 missense_variant p.Ser427Thr
G/T 36635604 missense_variant p.Pro406Thr
C/G 36635670 missense_variant p.Val384Leu
T/C 36635671 synonymous_variant p.Thr383Thr
G/A 36635854 downstream_gene_variant
G/A 36635891 downstream_gene_variant
C/T 36635946 downstream_gene_variant
A/T 36636366 synonymous_variant p.Pro265Pro
T/C 36636662 downstream_gene_variant
T/A 36637163 downstream_gene_variant
T/A 36637165 downstream_gene_variant
G/T 36637250 downstream_gene_variant
C/T 36637274 downstream_gene_variant
G/T 36637289 downstream_gene_variant
G/T 36637556 missense_variant p.His46Asn
T/A 36637925 5_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_09814.1
MGEFGVPHMRKRSSSDNSGGSFVGLDVRVQSPEALFHNKMTMMAHHNHHHRPLSSPFDNDSCAGDGDGPTAYMSFTNHINLVSGASVLAPAIDGGCGAPAPVRTLQPFDISPYTSPTTTSSTFKLSGGMAASLGFPFTSAQWRELERQAMIYKYMMASVPVPHDLLIPTSLTPSSRSACSMNDPLLSLDGGFNLRLASGTDPEPGRCRRTDGKKWRCSRDVAPNHKYCERHMHRGRPRSRKPVEVNTKTATPTSINNNNHQIKRPRHECNPFPSIPDVTVAISNPTSRKHGPSPHFLGSSTTLPYLECPLSLANFGYKAANLDSMASVSANKEPRGLDWMLNGDPISLGASDSEWQSLMHHKVGLSSESSCNNPQPQYLNSFTVYNTGLDQQNRRHPLFLNPLVVPMENLQPEKPRGFIDAWSNTESGENNAPTNSKNSAASIGKLTLSSLDLSMGGGAVNEDVGNVNIGLGLMESIANTHTDTKISLSNWVNPAPWVGSTLGGPLAEVLRSSTVTATTNERTSNTPSPATTHVESNSPLGTMVSSPSGVLQKTLVSLSDSSSNSSPRVASSRANSEMALLRFQRNVN*


CDS Sequence:
>Vu_09814.1
ATGGGTGAGTTTGGCGTTCCCCACATGAGAAAAAGAAGTAGCAGCGACAACAGTGGTGGTAGCTTTGTTGGGTTGGATGTGAGAGTGCAGAGCCCTGAAGCATTATTCCATAATAAGATGACGATGATGGCGCATCATAATCATCACCACCGTCCATTGTCATCACCCTTTGATAATGATTCCTGTGCTGGTGATGGCGATGGTCCCACGGCTTACATGTCTTTTACTAATCATATAAACCTTGTTAGTGGAGCTTCTGTTCTCGCTCCTGCTATTGATGGTGGCTGTGGTGCTCCTGCACCTGTAAGGACTTTGCAGCCTTTTGACATTTCTCCTTATACTTCTCCCACCACCACCTCTTCTACCTTCAAACTCTCAGGTGGGATGGCGGCTTCGTTGGGGTTCCCTTTCACAAGTGCACAATGGAGGGAGCTTGAAAGACAAGCCATGATATACAAGTACATGATGGCTTCTGTTCCTGTTCCACACGATCTTCTCATCCCTACTTCACTCACACCCTCTTCACGCTCTGCCTGCAGTATGAATGACCCTTTGCTTTCTCTGGATGGTGGTTTCAATCTGAGGTTGGCTAGTGGCACTGACCCGGAGCCAGGTAGGTGTAGAAGAACAGATGGTAAAAAATGGAGATGTTCAAGAGATGTGGCTCCAAACCACAAGTACTGTGAGCGCCATATGCACAGAGGGCGTCCCCGTTCAAGAAAGCCTGTGGAAGTTAACACCAAGACCGCCACTCCCACTAGCATCAATAACAATAACCACCAAATCAAGAGGCCTCGCCATGAGTGCAATCCTTTTCCTTCCATACCTGATGTAACCGTGGCCATTTCTAACCCCACATCTAGAAAACATGGACCTTCACCCCATTTTCTTGGCTCTTCCACCACACTGCCGTACCTTGAATGCCCCCTTTCTCTTGCTAACTTTGGTTACAAAGCTGCAAATTTGGACTCCATGGCTTCTGTTTCTGCAAATAAGGAGCCCAGGGGTTTGGACTGGATGCTGAATGGAGATCCTATTTCCCTGGGTGCTTCCGACTCAGAATGGCAGTCTCTGATGCATCACAAAGTTGGACTGAGCAGTGAGAGTTCTTGTAACAATCCCCAGCCTCAGTACTTGAATTCATTTACAGTATACAACACTGGACTGGATCAACAGAACAGACGCCACCCTTTGTTCCTGAATCCTCTGGTTGTTCCTATGGAAAATCTCCAACCAGAGAAGCCAAGAGGTTTCATTGATGCTTGGTCCAACACAGAAAGTGGTGAAAACAATGCCCCCACCAACAGCAAGAACTCTGCTGCATCAATCGGTAAATTGACCCTTTCTTCTCTTGATCTATCAATGGGGGGTGGTGCCGTGAACGAAGATGTAGGTAATGTTAACATAGGGCTGGGCCTAATGGAGTCTATTGCAAACACACACACCGATACCAAAATCTCTCTGTCGAACTGGGTCAACCCTGCACCTTGGGTGGGTTCAACGCTTGGGGGTCCTCTGGCTGAAGTTCTAAGGTCAAGCACAGTGACTGCGACAACGAACGAAAGAACCTCAAACACACCCTCACCAGCCACCACACATGTGGAAAGTAACAGTCCTCTGGGAACAATGGTGTCGTCTCCATCTGGGGTGTTGCAGAAAACGCTTGTTTCATTGTCTGATAGCAGTAGCAATAGCAGCCCAAGGGTTGCATCATCAAGGGCGAATTCTGAGATGGCCCTGCTGAGGTTTCAACGAAATGTAAATTAA


Promoter Sequence:
>Vu_09814::LG2:36637956-36639956(-)
TTTAAAATTACTTTAATTTTAAAGAGAATAATCACATTTGAATCATTCAAGCCAATGTGATCAGTTTAAGGTAGTTATTAGCCACACCGTAGTTACTTCACATGCATTATAGTCACATTATACGTTAGAGAAACATTAAAACCAAACAGTTGTAAATTTAAAACGAGCAAAACTAATTCTTATGAAACTAGTTCTTATGTAAGAAAAAAATATGAAATAATTTTTAACTTATATATATATAATTTGCAATTTTTTATGGTAACAATCGTCATATTTACTCATAATCAAATCCTCACCAACTAAGATGAATCTAATTGTTAGCGGTGGAGAATTTAATTCATCTTAACTAAGGTCCCATATAGATTATCAAATTTAGGGAAAACAAAATAGATGAGCAGAATCCGGGAAAATTTCCATGCCTGAGTTTGGCAAAAATTTGAAGATCTACAGATACTAAAGTCGCTGATTTTAAGTTTTAAAGGAAATAGAATGAATTAAAATTTGACAAGGATTAAAATAAAAAACTCTCATTTTTTGAAGATTAAAGACATTTAAATATAAAAATTATTATTATTATGGATTTGACAATCGTTCGAAGTTTCTCAGGAAGAAAAGTGATGTGAAGATTGGTTAGAAGGTGAAGAAAAAGTTTGGGGGGTCAGTGAAGATGGGTTAGAAGGGGAGGGTCATGTGTGGGGTAACCTGTTCGATAAAATGCCACTGACAACATTAAAGATTTAGTTTCAAAAACCTGACTCTGGAGGATAATTTATTAGGCCCTGCTTCACTTTTTTATCAAGTATGGCCAAACAAGCCCCTCAAGAAGCCGAACTATTTTAACAAAATTTGGTGCCCCAAATTAGGACAAGTACTTTTCATTTTAAACATGAAGAAAAACAGGGCACTTCCCCTTCCCTCACTTTATCTCATACCTACCTGAATGGGGTCAGCATAGTATTCAATTATGACTAGTATTATTAATATTATATTTTAATAACAAATTCTTTTTCTTTATCATATTTTTTTTTCTTTTTATCATTTCCATTCATTAACCATTAACTCACACAGCCATACTATCTGCCTATTCCTTTTTTTCCTTTTTCTTTTTATTATATATGTTTTATGCAATATTTTGCACCTGATATAATTCTCTTTGATTTGATGAATACCCATGTGGCTGTCCCATGTCACCATGCTGTAGCAAGTGCTTCAAGAACAAAATAATTAATTCAGAAGTCAAACATCAGACATAGACTTTACCTAGCAACTCAAAAATGTTTATTAGGGTATAAGAGGAAGAATGACACTTGTGGCAAGAATATCGGAGAATGCTCATCCAGCAACCTTGATTATTGATTATTGATTATTGATATGTGTAATTTTTTAATGAAAACGATGATTATGGAATTCTTCTTTTTACACGTATTTGGGAATTGGAATGTAGTAGAACCATGATTTTAGAATTTAGCCTTGTCTTCCTTATTCTCGTGTAAGAGCTGTTAACGGAACGTGGCTAACAAAAGGTTGGCACTTCCGAAAAGAAGTTTGATGACTGAAATATATGTTTTTGAATAAAAGTGGTATGATAAAAGGAGAAGAAATAGTATTTTACATTGGTGTGTTAATATTGAGAGGAAAAAAAGATGGCAGAGAGTGGGCAAAGTGTAGCATGTGTAGGTGTAGGGTGTGTTTGTTATCTCGTTGTGTGGTACCTTGGTTTCAATATCCCAATAAACTCGATGTGGGATAAAAGTATCTATCTCCAGCGGGGTCTAGCCATACATGCAGAAAGGGATAGATACCACAATAATGATGATAGATAAAAACTTAAAAACGGACAATGAAGAGAGAGAAAGGGTGAAAAGAAAGAAACAAAAACGGGTCACCTTTTTACTAATTTGTCTGCTAGCGTGTGGTGCGAATGTTGGAAGCATGGAAGCAAAGCAAAGGCCGAGAATGGCGGCAACCCATAACTCAATCATAAATCCCACATCAACCTC


Gene Sequence:
>Vu_09814(-)
ACTCTTTCTCCATTACAACACCTGGCACTCGAGGAATACCATTTTTTATTTTTTATTATCTTCACTGTACCATTTACTGTTTACATAGATAGATAGACACAACCCAACGCAAGACATCCCAATGCCATAAACAGCACTTTCCTCCCTTACCTCAAAAGTTGCTTTTCTTATTCTTTTTTTTTCCTTCATGGCAAACTGGTTCCCGAGTTTGAGCAAAACTGGTTGGTTTTAATTTATTTGACTTAACTTAATTATCGTATGAGTAATGGGTGAGTTTGGCGTTCCCCACATGAGAAAAAGAAGTAGCAGCGACAACAGTGGTGGTAGCTTTGTTGGGTTGGATGTGAGAGTGCAGAGCCCTGAAGCATTATTCCATAATAAGATGACGATGATGGCGCATCATAATCATCACCACCGTCCATTGTCATCACCCTTTGATAATGATTCCTGTGCTGGTGATGGCGATGGTCCCACGGCTTACATGTCTTTTACTAATCATATAAACCTTGTTAGTGGAGCTTCTGTTCTCGCTCCTGCTATTGATGGTGGCTGTGGTGCTCCTGCACCTGTAAGGACTTTGCAGCCTTTTGACATTTCTCCTTATACTTCTCCCACCACCACCTCTTCTACCTTCAAACTCTCAGGTTTGTGTTTTAATTACTCTGTCCCCCCTCATTGCTGTGTGTGCTAAGCTTAGGTTTCGTTGCATCTTTCTCACTAATACATCCCAAAGATTGCGTCTTTTTACTAGAATAAAAAGAAAGTAAAGGTGGGTCAAAAGAGAGAGAGAGAGAGTGTAGGTGCTTTGGGGTTTCTGTCCTGTCTAAGACTCTGAACATACTTGTGTTGTGTCTTCGTTGTGTGTTACAGCAGGTGGGATGGCGGCTTCGTTGGGGTTCCCTTTCACAAGTGCACAATGGAGGGAGCTTGAAAGACAAGCCATGATATACAAGTACATGATGGCTTCTGTTCCTGTTCCACACGATCTTCTCATCCCTACTTCACTCACACCCTCTTCACGCTCTGCCTGCAGTATGAATGACCCTTTGCTTTCTCGTGCGTCTTAATTTCTAATTTTCTAGTCTCATTTTCATAGTTCACGCACAGACACTAGACAACAGCATGTTCCCGTGCCTTTTCTGCCTTTTCACTCCATCCCCATCTAAAGTTTGTGTCTTTGTTCTGTCTCTCTTTGCCTGCCCTCTCTCGACCACTCTTTACTCTTTGTATTTGTCTCAAAACTTCACCTTTTTTTTTTCAAATCACTGTGGCCCTTTTCATGACATGGGGGCTTACTTTCACTGTTTCTTGAACTTTGCATTCCCTTTAGTTTTTTAATTTTACTTTTATTTTCACAGTGGATGGTGGTTTCAATCTGAGGTTGGCTAGTGGCACTGACCCGGAGCCAGGTAGGTGTAGAAGAACAGATGGTAAAAAATGGAGATGTTCAAGAGATGTGGCTCCAAACCACAAGTACTGTGAGCGCCATATGCACAGAGGGCGTCCCCGTTCAAGAAAGCCTGTGGAAGTTAACACCAAGACCGCCACTCCCACTAGCATCAATAACAATAACCACCAAATCAAGAGGCCTCGCCATGAGTGCAATCCTTTTCCTTCCATACCTGATGTAACCGTGGCCATTTCTAACCCCACATCTAGAAAACATGGACCTTCACCCCATTTTCTTGGCTCTTCCACCACACTGCCGTACCTTGAATGCCCCCTTTCTCTTGCTAACTTTGGTTACAAAGCTGCAAATTTGGACTCCATGGCTTCTGTTTCTGCAAATAAGGAGCCCAGGTGAGTTCGAAGTTTGATTTTGCCGTGTCTTTATTTCTCGATTTGCGTTCTGATTTTAATTCTGATTCTGCTTCCCCGGACATGCTTTCCCTTCTCAGATCTTTTGTTTCTTTAGTCAAAAAACAAACAACAATGCAACGTTATAAAGTTTGTCCAAGGCCTTATACATTTTATTTTACCTTGATTCTTATTAAACTGAAGTATGGTTGTGGTTCTACAGTCCGTCATTTTGTCTATTTTACTAGAGTAGCCGAGGAATGCTTTTCTATTGATATATTCGTGGGTGTTATGTTGTGATAAATCGGTGTTCTGTTACTGATCTGGTGAATTGAATGTGATAGGGGTTTGGACTGGATGCTGAATGGAGATCCTATTTCCCTGGGTGCTTCCGACTCAGAATGGCAGTCTCTGATGCATCACAAAGTTGGACTGAGCAGTGAGAGTTCTTGTAACAATCCCCAGCCTCAGTACTTGAATTCATTTACAGTATACAACACTGGACTGGATCAACAGAACAGACGCCACCCTTTGTTCCTGAATCCTCTGGTTGTTCCTATGGAAAATCTCCAACCAGAGAAGCCAAGAGGTTTCATTGATGCTTGGTCCAACACAGAAAGTGGTGAAAACAATGCCCCCACCAACAGCAAGAACTCTGCTGCATCAATCGGTAAATTGACCCTTTCTTCTCTTGATCTATCAATGGGGGGTGGTGCCGTGAACGAAGATGTAGGTAATGTTAACATAGGGCTGGGCCTAATGGAGTCTATTGCAAACACACACACCGATACCAAAATCTCTCTGTCGAACTGGGTCAACCCTGCACCTTGGGTGGGTTCAACGCTTGGGGGTCCTCTGGCTGAAGTTCTAAGGTCAAGCACAGTGACTGCGACAACGAACGAAAGAACCTCAAACACACCCTCACCAGCCACCACACATGTGGAAAGTAACAGTCCTCTGGGAACAATGGTGTCGTCTCCATCTGGGGTGTTGCAGAAAACGCTTGTTTCATTGTCTGATAGCAGTAGCAATAGCAGCCCAAGGGTTGCATCATCAAGGGCGAATTCTGAGATGGCCCTGCTGAGGTTTCAACGAAATGTAAATTAAATTAATTAGTGTTGATTTGAAATGGGGTAATATTATTATGTAATGTTGCATATTTGGGGAAGTGTGGTGTCGATTCGGATAGGTATAGGCCCTGTGTCCTATTGTGGAGGACGGTTTGTTATATACTGAAAAACCTCTGGTGAACAACCTGTGTTTCTGTTTATGTGATGAGGACTGGTTGCAGCTTT