Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_09707 LG2 34259336 34262150 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of gene expression, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated
Cellular Component   located in   nucleus, mitochondrion, nucleus
Molecular Function   enables   transcription cis-regulatory region binding, DNA-binding transcription factor activity, DNA-binding transcription factor activity, DNA-binding transcription factor activity, transcription cis-regulatory region binding, DNA-binding transcription factor activity, sequence-specific DNA binding, sequence-specific DNA binding, sequence-specific DNA binding
SNP Position Effect Amino acid change
G/A 34259410 synonymous_variant p.Leu25Leu
C/A 34259412 missense_variant p.Ala26Asp
T/C 34259575 synonymous_variant p.Thr80Thr
G/A 34259654 missense_variant p.Ala107Thr
T/C 34259664 missense_variant p.Val110Ala
C/T 34259719 synonymous_variant p.His128His
C/T 34259791 intron_variant
C/T 34259808 intron_variant
C/G 34259850 intron_variant
T/A 34259887 intron_variant
A/T 34259914 intron_variant
C/T 34259936 intron_variant
G/A 34259953 intron_variant
T/A 34259968 intron_variant
C/T 34260072 intron_variant
G/T 34260103 intron_variant
G/A 34260134 intron_variant
T/A 34260296 intron_variant
A/T 34260326 intron_variant
T/C 34260336 intron_variant
G/A 34260675 intron_variant
A/G 34260767 intron_variant
C/T 34260818 intron_variant
C/A 34260834 intron_variant
C/A 34260847 intron_variant
G/A 34260994 intron_variant
A/T 34261025 intron_variant
G/A 34261027 intron_variant
G/A 34261107 intron_variant
G/A 34261213 intron_variant
G/A 34261230 intron_variant
A/G 34261239 intron_variant
G/C,A 34261246 intron_variant
G/A,* 34261255 intron_variant
C/A 34261256 intron_variant
C/A 34261287 intron_variant
C/A 34261292 intron_variant
A/G 34261297 intron_variant
A/G 34261312 intron_variant
G/T 34261313 intron_variant
G/C 34261332 intron_variant
C/G 34261335 intron_variant
C/G 34261338 intron_variant
C/T 34261351 intron_variant
G/T 34261395 intron_variant
C/G 34261454 intron_variant
C/G 34261476 intron_variant
A/C 34261506 intron_variant
T/C 34261544 intron_variant
A/T 34261842 synonymous_variant p.Gly216Gly

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_09707.1
MEEVINSIRRASELVQNLQQDLPNLANQPETLSLSIDQITQAFTAAKEQLLLISRHTQTSESPPMLLHETTPHQPQMDATLIQEWLRSSHAVTMDQLFQMQLASMAAREVEDSERTMGSEGDQGQGIHASSSRPRRREANQEKKKILVPAPQFGNTEMPPEDGFTWRKYGQKEILGSKYPRSYYRCTHQKLYECQAKKMVQRLDHNANIFEVTYRGKHTCHMSSTAPSSVPPEHILLDITQNTNTTSSQLSPSVNLSLHPASGAAATTGGRAGPSTSRYGADYPVVDMADAMFNSGSSSGNNSMEFIFSPTEDKSDAN*


CDS Sequence:
>Vu_09707.1
ATGGAAGAGGTAATTAACTCCATTCGACGCGCTTCTGAATTGGTTCAAAACCTTCAACAAGACCTACCCAACTTGGCCAACCAACCAGAGACGCTGTCCCTGTCCATTGATCAGATAACTCAGGCTTTCACTGCTGCCAAGGAACAGCTGTTGCTCATTTCCCGACACACCCAAACGTCGGAATCTCCTCCAATGTTGCTTCACGAAACCACACCCCACCAGCCTCAGATGGATGCTACTCTAATACAGGAGTGGTTAAGGTCCAGTCATGCAGTGACCATGGATCAGTTGTTTCAGATGCAACTTGCTTCAATGGCAGCGAGAGAGGTGGAAGATTCAGAGAGAACCATGGGATCTGAAGGAGATCAAGGGCAGGGAATCCACGCATCTTCTTCACGACCACGGAGAAGGGAAGCAAATCAAGAGAAGAAGAAAATTCTGGTTCCTGCCCCACAGTTTGGAAACACAGAGATGCCACCGGAGGACGGTTTCACTTGGAGGAAATATGGACAGAAAGAAATACTTGGATCCAAATACCCAAGGAGTTACTACAGATGCACACATCAGAAGTTATACGAATGCCAAGCCAAGAAGATGGTGCAAAGACTTGATCACAATGCTAACATATTTGAGGTAACATACAGAGGGAAACACACGTGCCATATGTCCTCCACAGCACCATCGTCAGTTCCCCCAGAACATATTTTGCTCGACATCACACAAAATACTAACACCACTTCCTCTCAATTGTCTCCGTCAGTCAATCTCAGCCTCCATCCCGCTAGTGGCGCCGCCGCCACCACTGGTGGCAGGGCCGGACCCTCCACCTCAAGATACGGTGCTGATTATCCCGTCGTAGATATGGCTGATGCTATGTTCAACTCTGGTAGCAGCAGCGGCAACAACAGCATGGAATTTATCTTCTCTCCCACGGAAGATAAAAGTGATGCAAATTGA


Promoter Sequence:
>Vu_09707::LG2:34257336-34259336(+)
CAATTTTTTCCTTTTTTATGTTTTTTATAGTGCTTTATTTTGTATCTTAAAGATGGTTATAAATATTTTTAAACAAGGAAAAGTTTTAAAATTTATATTTTAATATTTATGGAGAATAAAACTAAATATTTTAAAAATTCTATAAGAATTAGAATAGTTATCTTCAATGAGAACATATTTAAGAACTACATTAATAAGTGTACTTTTAGAAATTTTTCTTGATCTTTTATTTCTTTCAATATATTCTTTTATATATATATATATATATATATATACATTATTTATATGAGATAAATATTAATCATATTCATTTCACACAGTAAAATACATGTGCTTAAATAGTATACAATGATTATAAAATGTCTGTTCATTATACACAGAAAAATATATCATTTTAATGATCATCATATTTATATTTTTTTAATAATTTCAATATATCTTTGTGTGTATAATATAATATTTTCTTATATTGCAAATAATATATTTTTAATTAAAATGAAGCAATGAAAAATAAATTTGTATCATATGGTGCCGAGAATACCTTAACAGCATGGAGTAGCAGCATACATCATAACTTCACTTAAAGGCATAAAATAGGATGAAACAAGACTGATAAAGAGACTATAGACCTAAGATAGATTAACAAAATTCTAAACAAATCTAATTTAGGTCCAACGGGATAAAAAGATTATAAAACCATTATAAATAATCTTATTCATGAGATAACTATTACGCATGAATCTAACTTAAACATTAGATTGTTTTTGTAAGTATGACCACCACTAATGTTGGAGACATGTTTGCAGTAAATCTCAAACTAGTTTGGTGTAGTGTATGATGGAGAATATCTCAAATGGAAGGAAAGCTCCTTGTGGAATTTTTTTCTTGTAAGTATTGACTAAATTTCAAATTACATGAAATGTTGTAACTTTGACTTTTAAGTTGAACAATTAGATCTATAACATATTTTTTGCAAATACTATTAAACGTATACCTTTATTAAATTTGACGGTAAGATTTGTTTTTTTAAATTATATCATTACATTATCGGCAATAGTTAACAATGTCACTCTTAACTGAATTAAATAAAGTATATTTTTTATTACATTTTAATGTAAATGGTAACTTTTTTCAAAATTCAAATAATTAATGAAGGGAATATGGTGGAAATCAATACGTAATTTTAAAAGAAAATATATTTCTTTACAAATTAGAAATGACTGCAAAATTCTGAATTTTGTAAAATTCCATGTAAATTCCATCGTAGGTCCGGTGTGTGAAACTTTAAGATTAACGTATAAAACAAAACAAAAAAAAAACATAGTTTAAATCCAATTAAATTATTGTTGGTTATTCAAGTATAGCAGAAATTTGAGAGAAGGAAAGTTTATTATTTAAATTGAGAAAAACATGTGTGCATAGACATAATGAAAAAGAGATACGATGTAGGGTAACAAATTTTGATGTAAAAAGTAAGGAAAGCATGTTGTTGTGGAATTATATATTGTTGAAGAGAAGAACAGTAAAAGAAGTGAATTTATGATGAAAGGATAGTTCCAAGAACGTATAGGAATTAAGAATGGCAGCATAATGTACGCCGAGAAGAAAATTTCCAAGTTGGGTCTAAAGCCTAGAAAATTCATCTGAAGGGGTCCGAAAGTAATCGTTTCAATGGGGCAACGGGGTCTTCGTCTAGACCCAAAGAAAAGATCATAAAGTTTGAAATTCCAAGTAGCTACAATTTGTTAACGACCAACGACTAAGTCATCGCTTCCACACACCTTCCACCCTTTTTTTCATCGCCGTGTAAATGGAAACGCACATGCATGTTCTCTTTATATTCTTGCTTCGATTTTTCCTTCCAACAAGTGTCACCACAGCACCTACGTAGAAGCTTAGTACGAACCTTGCACTTTCACCAACATATAAATATTAATATCACACTTTCTTTATTTTCAAATTTCACTGCATGATAAACAGATAGAAACTCCTAGAATCAA


Gene Sequence:
>Vu_09707(+)
ATGGAAGAGGTAATTAACTCCATTCGACGCGCTTCTGAATTGGTTCAAAACCTTCAACAAGACCTACCCAACTTGGCCAACCAACCAGAGACGCTGTCCCTGTCCATTGATCAGATAACTCAGGCTTTCACTGCTGCCAAGGAACAGCTGTTGCTCATTTCCCGACACACCCAAACGTCGGAATCTCCTCCAATGTTGCTTCACGAAACCACACCCCACCAGCCTCAGATGGATGCTACTCTAATACAGGAGTGGTTAAGGTCCAGTCATGCAGTGACCATGGATCAGTTGTTTCAGATGCAACTTGCTTCAATGGCAGCGAGAGAGGTGGAAGATTCAGAGAGAACCATGGGATCTGAAGGAGATCAAGGGCAGGGAATCCACGCATCTTCTTCACGACCACGGAGAAGGTATCTATCGATATCATACGTGTTTCGTCTTTTTAATACTAATCACTTTTAAGAAACTTTAACAACACCCTTTTAAACTGACTGAAATTTCTTAAAACACATTTCATTTTTTTTTGGTTGAGAGATTTCACGAATGTGTAATAAAGATGAGATGAAATAAGCGTGTTCAATAGGAGGGAGGGGGGACTACCGAATGGTATTTATGAAGGAAATTTTGACAGATGCGGTTAAATGGAGAGGAGTTTAGGACCCTCCTCGTACGAATAACAGATCACTTACAGATACAGTCACCGACAATAATTAAAAGAAAAAGAAGAAGATAAAAGCACAGTAGTGGGAAGCTTTAAGGTTTTTCCAGCTACCAATAAGCTTTAGTTTATGACAGACCGTACTATCGATTATTGAGAATTTGAGATGAATCCGAATGGGGTGGCTAAAAAAGTAGAAGGAAAGTTTCCAATATCTTTCTTGGTAATTAGGCAACCACTCACAAAGATATCTTATCAGCTACATTGTTGGTTAATAAAGAATAATATGATTTTTGAATAGTTGAGACATGTTTTAGAAAGTAGTTTCTTGGACATTATAGTTTGACTTTATGATGAAGCAGGGAAGCAAATCAAGAGAAGAAGAAAATTCTGGTTCCTGCCCCACAGTTTGGAAACACAGAGATGCCACCGGAGGACGGTTTCACTTGGAGGAAATATGGACAGAAAGAAATACTTGGATCCAAATACCCAAGGTATGGTTGGTAGTGCTATAGATATAATTGCTAAAATAATTACATGTCTTCATCAATGCAACTTATATCAAGGGTATCGGGTCTTTTAGGGTCCTAAGGCTTACCTGTTGATACACAAGACTATTTCTCCTTTCTTAATAATATTTCTTGTACTCTAAACTATCATAATGGCAGAAAATAAAACACAGACAATGTACCTGCCAACTTTGACACGGCCAAAACCCCTATATCCTTTCATTCTTGTCAACTTATATACAATTTCTGCTAATTGCTAGTCATAAACAAAGCCACAATTGATGCCCTTCCATATTGATTTTGACAGATGTACTTCCCATGCAAAGCATTTCTTTTGTCTGCGCCGTAACCGCTAAACATTCTTAACTATTTTTCATGCCACATCTACCTTCATTGAGATTTTTTTTTTCTCCATCTTAAATTCAAGACTCTTAACAGTTAAATTTTAAGTATAATTCAATTTTATAAAATTAGTTTATATATAAGATGATGTATATTATAAATTTGTCTTATTTTTAATTAATGAAATGTTTTATATATTTTTATGCAATTCAATAATGATAATATAATAAACTAAACTACAAATCTTCATATATTATGTTAAGAAGTACGTAAACATCATCTTATAACAAGCTTTTCTAAGATCAAGTTTAATATTTAATTCTTAACATAATATCGTAACTATAACTATAGTTAGAGTTTATGTTAATGAAATTTATTATTTGTTGAGTCTATTATTTCATGTGATAATGGCTTATTATTATATTATTCATTAACATCTAATCTTGTCCTTGAGATGTCTATGTTTCAGAATATATCGAAAATAACAGGTCGACTAAAAATAATATCAATTTGTAATATATAAATTAATACCAATCTCATTTTTAAAAGTGGTTTTTATATGTTATATATACGAAGGAACGCGTCCACACTGTCCCGCATAATGAATAACTGACGGTTGAGCATTTCATGTCATTTAATTCACGGCTTGTAGTGACCAATTAAGAAGCAATTGGTATATGAAGACAAACATTTCTTTTTTTCTTTTTCATATCTGTGAACCACAGGAAAGAAAATCACATTGAAAATGCTATGATTGGTGGATGAATGAAGGAATCTTGTTTGGTTGGTATCTTATGATAGCAAGAAAGAGTTTAACTGAAGTTAAATAGATGCATAGATTGTTGTTGTTTTTTGTTGATTGGAAATGGTTCTTGCTTTGTTCCTTGGCAGGAGTTACTACAGATGCACACATCAGAAGTTATACGAATGCCAAGCCAAGAAGATGGTGCAAAGACTTGATCACAATGCTAACATATTTGAGGTAACATACAGAGGGAAACACACGTGCCATATGTCCTCCACAGCACCATCGTCAGTTCCCCCAGAACATATTTTGCTCGACATCACACAAAATACTAACACCACTTCCTCTCAATTGTCTCCGTCAGTCAATCTCAGCCTCCATCCCGCTAGTGGCGCCGCCGCCACCACTGGTGGCAGGGCCGGACCCTCCACCTCAAGATACGGTGCTGATTATCCCGTCGTAGATATGGCTGATGCTATGTTCAACTCTGGTAGCAGCAGCGGCAACAACAGCATGGAATTTATCTTCTCTCCCACGGAAGATAAAAGTGATGCAAATTGA