Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_09700 LG2 34054903 34055577 PREDICTED: zinc finger protein 7-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   negative regulation of abscisic acid-activated signaling pathway, negative regulation of abscisic acid-activated signaling pathway, regulation of transcription, DNA-templated, negative regulation of abscisic acid-activated signaling pathway, negative regulation of abscisic acid-activated signaling pathway, regulation of transcription, DNA-templated, negative regulation of abscisic acid-activated signaling pathway, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated
Cellular Component   located in   nucleus, nucleus
Molecular Function   enables   transcription cis-regulatory region binding, protein binding, transcription cis-regulatory region binding, DNA-binding transcription factor activity, transcription cis-regulatory region binding, transcription cis-regulatory region binding, protein binding
SNP Position Effect Amino acid change
T/C 34054936 missense_variant p.Cys12Arg
G/A 34054956 missense_variant p.Met18Ile
G/A 34054957 missense_variant p.Val19Met
T/A 34054961 stop_gained p.Leu20*
G/A 34054991 missense_variant p.Gly30Asp
T/A 34055018 missense_variant p.Ile39Asn
T/C 34055024 missense_variant p.Ile41Thr
T/G 34055053 missense_variant p.Cys51Gly
G/A 34055064 synonymous_variant p.Lys54Lys
A/T 34055128 missense_variant p.Asn76Tyr
A/G,T 34055129 missense_variant p.Asn76Ser
T/C 34055157 synonymous_variant p.Asn85Asn
G/T 34055174 missense_variant p.Arg91Leu
A/T 34055213 missense_variant p.Tyr104Phe
A/G 34055219 missense_variant p.Tyr106Cys
A/T 34055294 missense_variant p.Asp131Val
C/T 34055321 missense_variant p.Thr140Ile
G/A 34055351 missense_variant p.Arg150Lys
G/A 34055383 missense_variant p.Gly161Arg
C/T 34055414 missense_variant p.Thr171Ile
G/A 34055474 missense_variant p.Arg191Gln
C/T 34055521 missense_variant p.Pro207Ser
C/T 34055531 missense_variant p.Thr210Ile

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_09700.1
MKHCLKPHEGECSKSDKMVLIDFMEMSKNGDATQELSKIKIIDSSISDTKCEDKKRANVKERKTFCCNYCKKEFSNSQALGGHQNAHKQERAMTKRVEGFDPYYSYYSNLYNSHHSLYGGFFNRALGIRKDSMIQKLPWTPRYEYSLFKRNHGTSIFDGFGIMKSDDNDKTIPQTLPLFTNDVNTSSTELRKKTMLATVDIVDHFVPEQTSNQTSCNLDLSLNL*


CDS Sequence:
>Vu_09700.1
ATGAAACATTGTTTGAAGCCTCATGAAGGTGAATGTTCAAAGTCTGATAAAATGGTGTTGATAGATTTCATGGAGATGTCAAAGAATGGTGATGCTACTCAAGAACTATCGAAGATTAAGATAATCGATTCATCTATTTCTGATACAAAATGTGAAGATAAGAAGAGAGCAAATGTGAAAGAAAGAAAGACTTTTTGTTGCAACTATTGTAAGAAAGAGTTTTCTAACTCACAAGCTTTGGGAGGACACCAAAATGCACACAAACAAGAACGGGCTATGACAAAACGTGTTGAAGGTTTTGATCCTTATTACTCTTACTATTCAAATTTATATAACTCTCATCATTCCCTTTATGGAGGATTCTTTAATAGAGCACTTGGGATTAGGAAAGACTCTATGATTCAAAAGCTTCCTTGGACTCCAAGATATGAATATTCATTGTTTAAAAGGAATCATGGGACGTCAATATTTGATGGGTTCGGAATTATGAAGAGTGATGACAATGATAAAACCATTCCACAAACACTCCCTCTTTTTACAAATGATGTTAACACTTCATCAACAGAACTTCGAAAGAAGACAATGCTTGCAACAGTAGATATTGTTGATCATTTTGTTCCGGAACAAACTTCCAATCAAACATCTTGCAATCTTGATTTGTCACTCAATTTGTAG


Promoter Sequence:
>Vu_09700::LG2:34052903-34054903(+)
TTCAAAAGATAAGGACTCAATTGAGACACCAAATAAGTAAGAGACCTATTTGAGATTCTTGACAAAAAAAAAAGGATCTACAAAAATATTGAACCTTATAATAAAAACAATGTGTAACTATTAAGAGTAATAGGTAGATATGACAACCATAGAAGACAAGTTTCTCTATCTCATATCAATCTCTAAAGAAAAAATTCATCATTTTTATACTAAAATCAATCATTATGAAGTTTTTGTTTCATCTTTTCCTATTGGGCAACTAATATATACTCGTATTTTGTTCATACCTATACATGTTTTCTTACAATTAATCAAATTTTCTAAAACAATAATAAAATTTGGAAACGAAACCTAATATTACGACCAAATATTATTAAAAATCTTAAATACCAAATATTTATAAATAAACTATAATTGTGTACATTTTAAATTAAAGTACCAAATTAAAGGTTATAAAACCAAAATATTTATTAAATTTATAAATATTAATGAAATAAAATTCATAAAATTAAAAAATATTTTAAAAAATTTCCAAAAAAACAAATATTCAAAAATAAAAATCTTTTAAATGTTTTTTACTCCCATTTTTTAAATTCTACTAAAAATATTTTTATATATATGGATAAAAATTATAATATACCATTACAATGAAATCACAATAAAAACAAATACTAAACTAAAAATAATTAAAATTTACATAAATCTTTTATATTTTAAATTTCAATATATGTTGGACAATAATAAATAAATTCATGACAGTGATATTAAATTATTCTATTATAGTAAATGGGTTTTTTAATACAATGATAATTAATTAAAAAAAATTATATGATAAAATTATATGTTTAAATATATAACATTTTTATTTTATGATAAAAATGATTACTTATTATATTTTTCTCATGATTACTTGACAATTATTTGTTTAAATATTGTAGCTCTGTTAAGAAAGTCTCAAACAAAAAATAATACGGAAAAGCAAACGACAGTGAGATGATGTTATAACAAAACTATATATACAAAAGTAACAATAATATACAAAAACTATAAATGAAAATAAAATTAAATATTTAATGCAAGAGAAATATCAACATCTTTTAAAACAATACGAAACAAAGTGAGCTAAGAAATTTTAAAATCTTAATGGATAAAATATAATATTCAAAAATAACAATTGATATGATTGGAGTCTAAAATATTTATGTTTTTTTCTTATATTATCACGAATAATTAATTGCTATATATATACACACGCACTAACAATTTTTTTTTTATCTACTCATTCATTGTATATATGGTAGGTTTATTAATTTATGGTAAATGTTTTCAATTTTCTGTTAAAGATAATTTTTACTAATTGACATAAATGACATTTATTAAACTTTATTATCTTGGATATTTATTTTATTAAAACATCCGCAGAGGTAACATAGGAGCGGGAAATTAAACAATATTAATGATGGTGTATACAAATTAAAACAAAGACTATTTTTAATCTGTTGGAGTAATATTAAATGAATTCTTATCAAAGATATAATTTAAACGTTTGCATTTACCGTAATTACTTTTTAGTACACATCTAAGAGAAGTCTCTTTATTGTAAAAAACAAAGAGAAGTAAGCCAATATTTTATTCCAAATATTTCTTTCACATATTAAATTAATTAACTGTATACAATAAATTTTAAAGATACTGATTTATAGTAACAAGATTAATACAGTGTATAACAGATATAAACACAGTAACTTTTGAATAAGTGGTGGTTAAATATGGAAATTTTGATGATCGAAGTAGTTGATAATATTATTTTGATTTTTATTGATTGAAAAAAATAAAATAATGAATATTCTTTTATTTGTTAATTTAGACGTAATAACAATCATTCATAATATATATATTATAGTCACACTATAGTCTTCACATAATTCATTCTCAATCTCAAAAGACATTTTATTACTGTTATCACTTCTATATTTTCTTGTTGCAACTCATTGCTCTAA


Gene Sequence:
>Vu_09700(+)
ATGAAACATTGTTTGAAGCCTCATGAAGGTGAATGTTCAAAGTCTGATAAAATGGTGTTGATAGATTTCATGGAGATGTCAAAGAATGGTGATGCTACTCAAGAACTATCGAAGATTAAGATAATCGATTCATCTATTTCTGATACAAAATGTGAAGATAAGAAGAGAGCAAATGTGAAAGAAAGAAAGACTTTTTGTTGCAACTATTGTAAGAAAGAGTTTTCTAACTCACAAGCTTTGGGAGGACACCAAAATGCACACAAACAAGAACGGGCTATGACAAAACGTGTTGAAGGTTTTGATCCTTATTACTCTTACTATTCAAATTTATATAACTCTCATCATTCCCTTTATGGAGGATTCTTTAATAGAGCACTTGGGATTAGGAAAGACTCTATGATTCAAAAGCTTCCTTGGACTCCAAGATATGAATATTCATTGTTTAAAAGGAATCATGGGACGTCAATATTTGATGGGTTCGGAATTATGAAGAGTGATGACAATGATAAAACCATTCCACAAACACTCCCTCTTTTTACAAATGATGTTAACACTTCATCAACAGAACTTCGAAAGAAGACAATGCTTGCAACAGTAGATATTGTTGATCATTTTGTTCCGGAACAAACTTCCAATCAAACATCTTGCAATCTTGATTTGTCACTCAATTTGTAG