Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_09677 LG2 33532993 33533779 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/C 33533023 missense_variant p.Ile159Arg
T/A 33533064 missense_variant p.Gln145His
A/T 33533087 missense_variant p.Phe138Ile
T/C 33533116 stop_lost p.Ter128Trpext*?
G/T 33533127 synonymous_variant p.Pro124Pro
G/A 33533129 missense_variant p.Pro124Ser
G/A 33533186 synonymous_variant p.Leu105Leu
T/C 33533187 synonymous_variant p.Pro104Pro
A/T 33533203 missense_variant p.Ile99Asn
G/A 33533212 missense_variant p.Ala96Val
G/A 33533215 missense_variant p.Thr95Ile
T/A 33533233 missense_variant p.Tyr89Phe
A/G 33533275 missense_variant p.Leu75Pro
T/C 33533289 synonymous_variant p.Leu70Leu
T/G 33533293 missense_variant p.Lys69Thr
A/G 33533308 missense_variant p.Leu64Pro
A/G 33533317 missense_variant p.Leu61Pro
T/C 33533339 missense_variant p.Thr54Ala
C/T 33533342 missense_variant&splice_region_variant p.Ala53Thr
T/G 33533377 upstream_gene_variant
G/T 33533384 upstream_gene_variant
G/A,* 33533391 upstream_gene_variant
T/C 33533396 upstream_gene_variant
G/T 33533398 upstream_gene_variant
A/T 33533426 upstream_gene_variant
G/A 33533433 upstream_gene_variant
C/T 33533440 upstream_gene_variant
G/A 33533447 upstream_gene_variant
T/A 33533459 upstream_gene_variant
A/G 33533463 upstream_gene_variant
G/A 33533467 upstream_gene_variant
A/C 33533491 upstream_gene_variant
A/G 33533501 upstream_gene_variant
G/A 33533507 upstream_gene_variant
G/A 33533509 upstream_gene_variant
A/T 33533514 upstream_gene_variant
G/A 33533548 splice_region_variant&intron_variant
C/T 33533553 splice_donor_variant&intron_variant
G/A 33533555 missense_variant&splice_region_variant p.His52Tyr
A/T 33533560 stop_gained p.Leu50*
C/G 33533587 missense_variant p.Arg41Pro
A/G 33533604 synonymous_variant p.Arg35Arg
G/A 33533606 missense_variant p.Arg35Cys
G/C 33533613 missense_variant p.Phe32Leu
A/G 33533616 synonymous_variant p.Arg31Arg
C/T 33533631 synonymous_variant p.Leu26Leu
C/T 33533643 synonymous_variant p.Leu22Leu
A/G 33533644 missense_variant p.Leu22Ser
T/A 33533673 upstream_gene_variant
G/A 33533681 upstream_gene_variant
C/T 33533699 upstream_gene_variant
A/G 33533700 upstream_gene_variant
G/A 33533736 missense_variant p.Ala15Val
T/C 33533742 missense_variant p.Asp13Gly
G/A 33533744 synonymous_variant p.Asn12Asn
C/T 33533747 synonymous_variant p.Gln11Gln
C/A 33533755 missense_variant p.Val9Leu
A/G 33533756 synonymous_variant p.Arg8Arg
C/G 33533776 missense_variant p.Glu2Gln

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_09677.1
MEVEDGRRVGQNDFAVVEWRGLTRLLLLDKRFAGRGMEELREAIKVVPMLFQCYNDYYRDASTANLGGKARRRFSEYPMKVCHYFNKGLCKHGNNCRFYHRQVATENLSQMYGNDASGEDQVISPRSLAQLEKEIIELLRSRDDAILIASLPMAYYDRYKKVLQALMN*


CDS Sequence:
>Vu_09677.1
ATGGAAGTGGAAGACGGTAGGCGTGTGGGGCAGAACGATTTTGCCGTGGTTGAGTGGAGAGGCTTGACGAGGTTGTTGCTTCTAGACAAACGTTTCGCGGGTCGTGGTATGGAGGAGTTGCGTGAGGCAATTAAGGTGGTGCCTATGTTGTTTCAATGCTACAACGATTACTATAGAGATGCTTCTACTGCTAATTTGGGTGGCAAAGCTAGGAGAAGGTTTTCTGAATATCCAATGAAAGTTTGTCACTATTTCAACAAAGGATTATGCAAACATGGAAATAACTGCAGATTCTATCATAGGCAAGTTGCCACTGAGAATTTATCTCAGATGTATGGAAATGATGCTAGTGGTGAGGATCAGGTGATTTCCCCAAGGTCACTAGCACAACTAGAGAAAGAAATTATTGAGCTTCTAAGATCAAGGGATGATGCAATATTGATTGCTTCTTTGCCAATGGCGTACTATGATAGATATAAGAAGGTACTGCAAGCACTAATGAACTGA


Promoter Sequence:
>Vu_09677::LG2:33533779-33535779(-)
CGGCCACAGTGAAGAGGGAGAAAACGTTGAAGGCGAGTTTGGGGATGCGGAGATTGTTCGCCACGTCGTGAACCCAGGGGCAGAGGAAGTCGATGATGACGCAATCGGGTGGGTGCTGCAACTTGCAAACAAAACAAATCACCGCTGTTAATATCGAGCGTCACATGCAGTGGGAGCAGAAGGGACCGAACGATCACATGCAGTTGGAGCAGCAGGGATCGAACAATCACAGGCAGTAGGAGCATGAGGAGAACACCGAACGATTGGATGAACCAAACTACTACTTTGAATAATGAGTGAATCTGTGTTTGAAAAGATAAGTTTTGAAGGAAGAGAGAGAAAAAGAAATATTTAATAAAGATATAGAAAAGAGAGAAAAAGCTGGGACATTGCAGGAAAAATAGAGGAGAGAGAAGAAAAACTGTAAATTCCTTTGCCACGTCAACTGGGAGTTAACTCCGTTTATACCAATTTAACGGAATGAAACTAATTAATACAATTTATACTACTTTGAGATAAAATAGAGGCATTTTTAAAACTAGGTACTAAACACAAATTCATCTCTTAACATGGGGACGAAGTTAATAATGTAAATAATCAAACAATAATGAAATAATTAAGGTTGTGCAATTTTAAAATTTAATTCCTTAATAAAACATTTAATGTAATTAATATATACCCTTTTTTTGTTAACATTTAAATAATTATATTTTATTTACTGATTTCAAGTTACTATCCTTATAATAATGTATAAGAAACCGATCATATATTTAAATTAAAGACAAAGATAAGTTTCGTTTGACTTTGTTATAAAATAATTTTATTTCACTCAAACAAATGAAAAAAGGTCTAAATAAATTTGTCTGTTATTTAATAATTTTAGTTTAATCATTTAAATAGTTTTTATTTTTTTTTTACTTTTCTCAAATAGGTTTTCACTCCCTTTTTTTCGTCTTAGTTAGATCTTTATTTTTTAAAATTGAAGCAATTAGTTGTTTACTATTACTTCCGTACTAAAATCATCATAGAAGTGTCACGCTTGTTATTTTTTTTGAATTTTAAGTATTTTTTTCATTATTTTTATTTTTTATTTTTAAAATAAAAAAAATTGTTACGTGACAATGATAGTGTGATGTGACATTGACAGTGTCACGTGTTATTGAATTTATCTCAATTTGGTCACTATATTTTTATTTTGTCTCAATTTGATTCCTATATTTTTATTTTTCTCAATTTAGTTCTAATTTTTTTAAAAAGTTAAACAATTTTGTTATTTTTCCAATTCAAACAAAATTTAATTTGCATATAAATATTTACAAAAACATTTATATAAATTGGATATTTTTTTATTAGAAAAATAAAAAATATACAAACTAACATATAACACATTTTTATTTATGTAGTCACCAATGGAAAATATACTTTTTATAGCTATTTTTTATACCTGTTAAAATCCACCCTGTATAGAAAATGATGTAATGGCAATTTTGTAAATATAAAAAACCTTTTACATCAGTTATAATAAAAATAGGCATAAAAATTGGTTTGGTGGTAATATTGTAATAAAATACAAATATTTTATACCGATTAACATAAGAATAGGTGTAAAAAGTCATTTTTTATAGCTATTAACTCTAAAACAAGAATAGATTATTGTTCTACAACGGTTGCACGTTACAACAGGTATGATTATTTTACCTTCTATTCAAGAATAGTCCGTAACATCGCCTGCATCTCCTGCGATGACCTCGATCCTAGCCTCACTCCTCTCTTACCTCATCCAACTAGCGGTGACGACGAATTCAAAAACGAAGAAGAAAGAACTCTCATCTCAGTGCAGCGTCAGATCCATGGCAAGGCCGATGGAGATGGCGACATCCTGAGTCTCGTTTTGTACCGCGACAAACTCACAAGGACGTTCAACTCGCATGGATTCATGAAGTTCAACAACCTCGCAAAGATTTCGCGGGCCGAACAAGAATAAGAAGAGGAAGGAGGGA


Gene Sequence:
>Vu_09677(-)
ATGGAAGTGGAAGACGGTAGGCGTGTGGGGCAGAACGATTTTGCCGTGGTTGAGGTTGTTAGGAGGAAGAAGAAGATAGTGTTGGTATGAGGAAGTTGCTGGGAGAAGAATTTGTCAATAGCAAGTGGAGAGGCTTGACGAGGTTGTTGCTTCTAGACAAACGTTTCGCGGGTCGTGGTATGGAGGAGTTGCGTGAGGCAATTAAGGTGGTGCCTATGTTGTTTCAGTAATCACTCTTTCTATTTTGTGAGTTTTCATTATTTGCTTATACGCCGTTTTTGTGCCAATTGTTGTGTTATCGATGTGATTTGTCTTTTAATATTTTTTGTGTACATTGGCGAAGAAACGAGATTTTTATAGTTATAATGAATTACATGGATTCTATCATCGAGCTTCAGAAGCAGACACAATTGTGCAGTTTTGAGAATCGTATAGATGCTACAACGATTACTATAGAGATGCTTCTACTGCTAATTTGGGTGGCAAAGCTAGGAGAAGGTTTTCTGAATATCCAATGAAAGTTTGTCACTATTTCAACAAAGGATTATGCAAACATGGAAATAACTGCAGATTCTATCATAGGCAAGTTGCCACTGAGAATTTATCTCAGATGTATGGAAATGATGCTAGTGGTGAGGATCAGGTGATTTCCCCAAGGTCACTAGCACAACTAGAGAAAGAAATTATTGAGCTTCTAAGATCAAGGGATGATGCAATATTGATTGCTTCTTTGCCAATGGCGTACTATGATAGATATAAGAAGGTACTGCAAGCACTAATGAACTGA