Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_09529 LG2 25568346 25569495 PREDICTED: ethylene-responsive transcription factor ABR1-like
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/A 25568409 missense_variant p.Leu285Phe
A/C 25568460 missense_variant p.Phe268Val
T/C 25568513 stop_lost p.Ter250Trpext*?
A/G 25568563 synonymous_variant p.Arg233Arg
C/T 25568784 missense_variant p.Gly160Arg
T/C 25568841 missense_variant p.Met141Val
G/A 25568902 synonymous_variant p.Asp120Asp
T/A 25568919 missense_variant p.Ser115Cys
A/G 25568922 missense_variant p.Cys114Arg
G/A 25568958 stop_gained p.Gln102*
G/A 25568977 splice_region_variant&intron_variant
A/T 25569121 upstream_gene_variant
C/T 25569130 upstream_gene_variant
G/T 25569223 synonymous_variant p.Thr91Thr

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_09529.1
MMNTHALSRLFPGMNREREMSAMVSALTHVVTGEVPTSTDSAFLHDNHAVTPHVPSSASITPSLSSSSNYVLGTSSHKRAREQDAPCFSQTSSMPRSGEFSNNSTSRITREMGNAVYEYKTTENVRGDEERRKYRGVRQRPWGKWAAEIRDPFKAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFPENVTLRQPQFSVSNSSTSLVSISTSTDPAVHTPSFLPSQGATNVYEYFQLSGFPTNLYDDRTLVTSSMASHLHSSSSSSSSSAFVTSSQDTSLSSFYSTQIPPWSASAPSSSSSG*


CDS Sequence:
>Vu_09529.1
ATGATGAACACGCATGCATTGTCAAGGCTGTTTCCGGGTATGAATAGGGAGAGAGAGATGTCTGCTATGGTCTCAGCTTTGACCCACGTTGTCACCGGAGAGGTTCCAACATCCACTGATTCTGCGTTTCTCCATGATAATCATGCTGTTACACCACACGTGCCTTCTTCTGCTTCTATAACACCCTCTTTATCTTCTTCATCTAACTATGTTCTTGGAACCTCTTCTCACAAGAGAGCAAGGGAACAAGACGCACCGTGCTTCTCGCAAACCTCTTCTATGCCAAGAAGTGGAGAATTTTCAAACAATTCGACAAGCAGAATAACAAGGGAAATGGGAAATGCAGTGTACGAATACAAGACGACGGAGAACGTTAGAGGGGATGAGGAGAGGAGAAAATACAGAGGAGTGAGGCAGAGGCCATGGGGGAAATGGGCGGCGGAGATAAGAGATCCGTTCAAGGCGGCGAGGGTGTGGTTGGGGACGTTTGACACCGCGGAGGCAGCTGCCAGAGCATACGATGAAGCTGCTCTTCGATTTAGAGGAAACAAAGCGAAACTGAACTTCCCTGAGAATGTCACTCTCCGGCAACCTCAGTTTAGTGTTTCGAATTCTTCCACTTCTCTCGTGTCCATTTCAACGTCGACGGATCCAGCTGTGCATACTCCATCTTTTCTCCCTTCTCAAGGTGCCACCAACGTTTACGAGTATTTTCAGCTCTCGGGCTTCCCCACCAACCTCTATGATGATAGGACGCTAGTCACGTCTTCCATGGCTTCTCATCTTCACTCTTCTTCCTCCTCTTCTTCTTCTTCTGCCTTTGTAACTTCTTCGCAGGACACTTCACTTTCTTCCTTTTATTCTACCCAGATACCACCTTGGTCAGCATCTGCTCCTAGCTCTTCTTCCTCTGGATGA


Promoter Sequence:
>Vu_09529::LG2:25569495-25571495(-)
ATATATATATATATATATATATATGGATTGTTAATTAATATCAAATTTTAAAATATAACATATATGAAGGATTACTTAGTTTAATTGAAAGTTTTTTAATAAAGTTTTTAAGACAAAAACTATTTAGAGAGTATATTGTCTAAGTAACCCTAATTTTGAAGTTTAACAATTAGTATTAAACAAAATGTTATTGTGTAGGTAAAACTGTTTGAATTAAGTAGCGTCTAGTAAAGAAGTATATTATAACCTCTAAAGTCAAAGAGTTGAAGTAAAGTTTTTTAGATCAAACTGTTTAAATGGATTAGAAAGTCATAAACAATGGCTATAAAGCCAAGTGTCTCACATTGAAATTTCTCAATAGACTCTAAGCGAAGCTAGCTTCTTATGAAAATAAAAGTCTATCTCTTATATGACACTAAGGTTAAATAAATGTTATTATTCAAAATAGTATTTATATCAAGAAAAATCTTTAATAAAAAATATTGTCTGATAAGTGATCATCAATGCTTTAACTTTGAAAAAACATTTTACGTTTATATTATTTGAGGAATATATATTTATCTTACCAAATAATGCATTTATTAGTAAAATGAGAAATGGTAAAATGTCTTGAACACATTATACTATTTAGCATTTATCAACGTTTGTGTGTATGAAAAAGTACTCAATGTTTATACCAATACACATTTGTAAATTTGTATAAAAAGTAAAAATACCGCATAATACATTCTCATAAACAAGAGGTTAAACACACACAAAAAAAAGCGATAGAGAAAATATTTTTATAGAATGAATAAAGTGAATATTTTCATTTTGAAACCTCAACTTTACACGTCGAGACACACATTCACCCATCACCTGTCTCCCCCACTAAATTCTGCATAAGGGTTTGTTCATATTTAAGTGATGTGAACATTTTCAACAGGAATGTGAACGTAACAAGTGTTGCATACATGCATTTGTTGATCTACTTGCATGGGGTTCTTCCAAAATATTGCTTAGCTTTTGAGTGACGTCGTTTTAGAAAATAAAAATAAAAAAGCTAAAAATACCCCACTTGGTGGGTCTTTATGTTAATTTGGCACCTTTGGATTCATCCTAGACCAGAAGATATCCTTTTAGGAATGGATGGACATAAAAAGAGGATTTTGGAGACAAATTGATAAAACTTTAGTGCATTACCAAACATGGTACCTTGATGGGTCATGCCGATTACTAAATTTAGTTATTTGATATATATCCCTTTTGGTGTATAACATGAAAAAAAAAAGGTACGTTTATTAAAATCTCACACGAAACAAAATATAAGCTCTTTATATGTTTAAAAATATCAAGTAATTTTGTAATTTTTTTCGCTGACTTGATATTTTGGATTAAAATGAAAGAGTTTAGGTGAAAGAAAATTCAAATAGTACAAAATTTGTCTTACACTTACTATATTTATTTGTAATGTCGGCTTATACAAGTGTTACTTTTTCTTCACTTTTTGCCGACTAGCAGGAACTGCCGGTGGAGGTTCCTCTCCACACACAAAACTTGCGCCGGCAACTTTATGCTTTCACATTTTACATTTTTTTTAATGGTAGTTATTAAAATATAAAATATAATCTGTTCTTAATTTTTTAATTAATTAATTTGTGCACCTTAACTGTGGGGCAAAAAAAGATTAGCAGATAGAGAAAAATAGAAGGAATTATTCAAACCGCTTTATATTTAATGTAATAAATAAGAATTCTTATCTTATTTGATTTAGTTGGTAAATAAGGAGAGAAGTTGTATAGGTGTTCAATAAATCACCACCGACTGACTCTCGTATGGCGGCGCCTGCGAACACTTTGGACCTTTCCATCGTTTCGTATATATAAGAAACAACGCACGGGGTTGTGGGATCGAAAGGGTGTTTCTGCATGCACAAAAGCTAATCCAAGTGTCTCTGATTTTGTTTATTTAAGGTGGCGAATCCAAGAGAGAAAAACGAGGTTGACAAGAACGAGGGAGGG


Gene Sequence:
>Vu_09529(-)
ATGATGAACACGCATGCATTGTCAAGGCTGTTTCCGGGTATGAATAGGGAGAGAGAGATGTCTGCTATGGTCTCAGCTTTGACCCACGTTGTCACCGGAGAGGTTCCAACATCCACTGATTCTGCGTTTCTCCATGATAATCATGCTGTTACACCACACGTGCCTTCTTCTGCTTCTATAACACCCTCTTTATCTTCTTCATCTAACTATGTTCTTGGAACCTCTTCTCACAAGAGAGCAAGGGAACAAGACGCACCGTGCTTCTCGCAAACCTCTTCTATGCCAAGAAGTAAGCAACATGTTCAAATCTTTACTATCTATGCTACTTTCTTCAATTTTCTTCAATCGTTGCTGGGCTCGTGTTTGGAATGTTTTAAGGAATTAGGGTGTACTAGTTAAAAATATCTTCTTTAATTTTATATTGTAACATGGAATAGAACAGTAGTGAACCTTCAAGATTGCAGTGTAATGTGTGTTATTTTGTTTTTGGTTACCACCTAACGAGATACATGGGAATACAGGTGGAGAATTTTCAAACAATTCGACAAGCAGAATAACAAGGGAAATGGGAAATGCAGTGTACGAATACAAGACGACGGAGAACGTTAGAGGGGATGAGGAGAGGAGAAAATACAGAGGAGTGAGGCAGAGGCCATGGGGGAAATGGGCGGCGGAGATAAGAGATCCGTTCAAGGCGGCGAGGGTGTGGTTGGGGACGTTTGACACCGCGGAGGCAGCTGCCAGAGCATACGATGAAGCTGCTCTTCGATTTAGAGGAAACAAAGCGAAACTGAACTTCCCTGAGAATGTCACTCTCCGGCAACCTCAGTTTAGTGTTTCGAATTCTTCCACTTCTCTCGTGTCCATTTCAACGTCGACGGATCCAGCTGTGCATACTCCATCTTTTCTCCCTTCTCAAGGTGCCACCAACGTTTACGAGTATTTTCAGCTCTCGGGCTTCCCCACCAACCTCTATGATGATAGGACGCTAGTCACGTCTTCCATGGCTTCTCATCTTCACTCTTCTTCCTCCTCTTCTTCTTCTTCTGCCTTTGTAACTTCTTCGCAGGACACTTCACTTTCTTCCTTTTATTCTACCCAGATACCACCTTGGTCAGCATCTGCTCCTAGCTCTTCTTCCTCTGGATGA