Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_09460 LG2 23709359 23712374 PREDICTED: transcription factor bHLH137
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/G,T 23709520 3_prime_UTR_variant
C/T 23709539 3_prime_UTR_variant
G/A 23709732 3_prime_UTR_variant
A/T 23709742 3_prime_UTR_variant
T/C 23709764 3_prime_UTR_variant
T/G 23709812 3_prime_UTR_variant
T/A 23709813 3_prime_UTR_variant
A/T 23710093 intron_variant
C/T 23710098 intron_variant
T/G 23710107 intron_variant
G/C 23710149 3_prime_UTR_variant
G/T 23710180 synonymous_variant p.Ser340Ser
A/G 23710302 intron_variant
A/C 23710466 missense_variant p.Ile279Met
T/C 23710475 synonymous_variant p.Thr276Thr
T/C 23710477 missense_variant p.Thr276Ala
A/C 23710485 missense_variant p.Phe273Cys
C/G 23710498 missense_variant p.Glu269Gln
A/T 23710548 missense_variant p.Met252Lys
A/C 23710553 missense_variant p.Asn250Lys
G/A 23710569 splice_region_variant&intron_variant
G/A 23710637 intron_variant
A/T 23710750 intron_variant
A/T 23710878 stop_gained p.Leu214*
A/G 23710968 intron_variant
G/C 23711092 intron_variant
T/C 23711250 intron_variant
C/T 23711406 missense_variant p.Glu150Lys
T/A 23711688 intron_variant
A/T 23711792 intron_variant
T/G 23711963 missense_variant p.Asn69Thr
G/T 23712026 missense_variant p.Thr48Asn
G/T 23712033 missense_variant p.Gln46Lys

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_09460.1
MAAFSYQYHPFLVDPAFFPSNMNTPSSPSPPQFHLPQETSFNLTNQETSCVDQSSKITISDNEPSVTKNLSPQSSVVVDKLETGEQVTQKVNTPPLKKRRTRNGSSLTSNTQSKDTATEGRSKKQRKNNGGVKEDKAKEEKKEQRKCHEEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNPMFYDLSTDLDTLLVRPEKLNSMASPSPLPCVSHCNSPNEATTFADTTTITPTNIFHNATDYLLDNSASFFLQGQRSTMFSEEDTGSHFWDAEDQRQKFLHPYGFSNNLCSFH*


CDS Sequence:
>Vu_09460.1
ATGGCAGCTTTTTCATACCAGTACCATCCTTTTCTGGTTGATCCTGCATTCTTCCCCAGCAACATGAACACCCCTTCTTCTCCTTCTCCTCCCCAGTTTCACCTCCCTCAGGAAACATCTTTTAATCTCACAAACCAGGAGACTAGCTGTGTTGACCAAAGCTCCAAGATCACCATCAGTGACAATGAGCCTTCTGTCACAAAAAACCTTAGCCCTCAGTCCTCTGTGGTGGTGGACAAGCTTGAAACCGGTGAACAGGTCACTCAGAAGGTGAACACTCCGCCGTTGAAGAAAAGAAGAACCAGAAATGGATCTTCCTTGACTAGTAACACTCAATCCAAGGATACTGCAACAGAAGGAAGAAGCAAGAAACAAAGGAAGAACAATGGTGGGGTGAAAGAAGACAAGGCAAAAGAAGAGAAGAAGGAGCAGAGAAAATGTCATGAAGAGCCCCCAACAGGCTATATCCACGTCAGAGCAAGAAGGGGTCAGGCAACGGATAGCCACAGCCTTGCGGAGAGGGTGAGAAGAGAGAAGATAAGTGAAAGGATGAAGGTGCTGCAACGGCTTGTGCCAGGCTGTGATAAGGTGACTGGAAAGGCCCTTATGTTGGATGAAATAATCAATTATGTTCAGTCTTTACAGAATCAAGTTGAGTTCTTATCAATGAAGCTTGCTTCCGTGAATCCCATGTTTTATGACTTGTCAACGGATCTAGATACCCTCTTGGTTAGACCAGAGAAACTAAATAGCATGGCATCACCATCACCACTACCATGTGTGTCACATTGCAACAGCCCCAACGAAGCCACAACTTTTGCTGATACAACCACCATTACCCCCACCAACATCTTTCACAATGCCACTGACTATCTTTTGGATAATTCAGCTTCATTTTTTCTTCAAGGCCAGAGGTCAACTATGTTCTCTGAGGAGGATACCGGTAGTCATTTCTGGGACGCAGAGGACCAGCGACAAAAGTTTCTTCATCCATATGGATTCAGCAACAACTTATGTTCCTTTCATTAA


Promoter Sequence:
>Vu_09460::LG2:23712374-23714374(-)
AATAGAATATTTAACTCAATTAGTAAATAATTAAATATAAAGTAAGATACTAAAAGTGATTTTTTTAAAAAATATACTTGATATTTATTTAATTTATTTAAATGACTTATAGATGATTTTTTGTGTTGCGCAAACATCACCAAAGAAATCTAAGTTTCCTTCTTAACTAATTTAATATAAAAGTTAACCAAGGTCAGTCTAATAAACACTATCACATACGTTTACTAATTGAATGCAAAATATCATATTTTTGGGGTTTTAGTGAAAATAGAAAATGGTAATCGATTAAACAACACTAAAACTAAAAAAAAATGAAAATACAAGATTGAAATGTAAAGTGTAGTAGAAATTAAATGAAATGTATGATCAAAACTAAAGAATAAAAACATATATCAAAAGAAAAGCATCAACAAAATAGAAGTGTTCCAACCAAGTGCTTAAAAATATGAAGAAAGTAGTGAATGCATTGTAAAACAGTGCATAATCAAGAGGTGGAATAGTAGTTCAGACAATTAGATATTAACATTAAATTGAAGTTCATTGTGCAAAATTAAAATTAGGTGGAAGGGCAATAAAATAAAAGGAAAGAAACAATGAAAATAAGAGCTTAAAACACATCAAATTAAAAACAAACTATCGAAAACAAGTCTACAACATTATTAAACTCGGAAAATGAAAATAATAGTACCAAATGTCTCCTCCTTTCAATACTCAGAAAAAAAAAATTAAAGTTTGCCTCTCGACTTCCCTCCCCCTGTTATATTCTCCAAATATATATATATATATATATATATATATATATATAAAAGAAAATTTTTGTTCCACATGACTATTACCACTCGTCTCAAACTCAGAATTCTCCTTGACGAAAATCTAAAAAACTGCAAAAAGTTGTCATAACAAAATTGGTTTCTGTATTTTCTACTAATGTGGTAGTGCACAATCCTCGGTTAACTCCATATGGGTAGTAGTGAAAGTTATAAGTGAAAATATTTGTCTAGGACAAGCTTTTTTTTGCTGGCCGAGCTTCTCCTCTATTGAGTGAGTTTCTCCCGATCGGCAAGATTAGATGACACGAAGCAACACAACTGAAATTTGCACCTCCAAGTATTTGATTTGTAGCTTCTAACTTATTTCTTTATATAAACCTCTCCCCTTATCCTTCTCGAATTACAACTAGGTTTCCATCAATGTAGCTTTTAGGGTCAACTCAGGAGCTTATCAACATGACATAACAAGTAGAAATTCTTGTAGACCAACAACTCAACAACATAACAACACGATAATCCGATCTCAGCAGCTTAACAATATGATACCTTAACTTAGCAGCTTAGTAACACGTATTCCACAACACATGAAAATTCTAAAACTTCCTAGGATACATAAATCTAAGTTAAAATTAAAAGATAAATAAAAACAAACAGTATAAAAGAGTGTAATAAGCTTTAATGTAATATAAATGTATAAAAATTGATCTATCTAACGTATATATTTAAAGAAATAAAATCACGTGAAGTGATAAGTATTTCAAAACAAAATGAATAATTAAAAAACCCATCAATTATCATCTCTAAAATATTACTCTTTCTCCTAGATAGGTACTAAATTAAACATATTATATAATAATTCCTCAAATATTAAAAATGATTCTAAATATTTTTTTACCTATGGAAAAATTCGTCAAATTAACTCTTTTAGCTTAATAAAATATTTCAATATAAAATTAAATTAGTGACGTTTGAAATACTTTAAAATCTATTTATATATGACTTTAAAATCTATTTATATATCACTCTATACAAAATTGATGGTGTACTAGAGTAATTAATGTTTAAAATTCTTAGAGCGTGTTATTATTTTTAAGGGTTCCCAACAAACAAAAAGCATCATAATCTTTCCTATTTATGATAATTGGAGTGCCATTTATTACTATGACTAATGTGAAAGAGAAAACAAATTGATGACATTAGACCAGTCAAATGTACTGCCTCTGCTGCATG


Gene Sequence:
>Vu_09460(-)
AGAAAGAGTTACTTACTGCTTTTAAAGATTTCTAACATTTTATGTCCTCAGATCTGTATATATAGAGACCACACACCCTTTTAGTTTTGTCACAGACCATCCTTTCCTGACTCCTCCACACCACTGCATCCCTTTCTTTCATCATTTTCGTTCTTCATAACTTCCATTTCCAACCCAAAGAAACACACACTCTCTCTCTTTCCCACATGGCAGCTTTTTCATACCAGTACCATCCTTTTCTGGTTGATCCTGCATTCTTCCCCAGCAACATGAACACCCCTTCTTCTCCTTCTCCTCCCCAGTTTCACCTCCCTCAGGAAACATCTTTTAATCTCACAAACCAGGAGACTAGCTGTGTTGACCAAAGCTCCAAGATCACCATCAGTGACAATGAGCCTTCTGTCACAAAAAACCTTAGCCCTCAGTCCTCTGTGGTGGTGGACAAGCTTGAAACCGGTGAACAGGTCACTCAGAAGGTGAACACTCCGCCGTTGAAGAAAAGAAGAACCAGAAATGGATCTTCCTTGACTAGTAACACTCAATCCAAGGTAAATAATTTCAGTTTAATTTCTTTATACTCACTAAGTTTCATTCTGTTAATCCAGCAGAAATCATTCTTGCTTTAACAACTTTTAAGATAAACTTACTGTACAGAGTTTGTTGCGGCTAGACTATACTATATAACTATTTACAGTAGAAATGAATGATTTATGTTCTAGCTTTATTTGTTTGTTTTCAGAAAATGTTGTAGCTTTATTAATTATGCAAGTTTGGGGCCTTTTTCCAGCATTAAAATTTGCTATAATATAATTAGAGTTTAGTGTGTTAACCAAATTAGTATTGTTGTTTGTTTATTATTCTAGGATACTGCAACAGAAGGAAGAAGCAAGAAACAAAGGAAGAACAATGGTGGGGTGAAAGAAGACAAGGCAAAAGAAGAGAAGAAGGAGCAGAGAAAATGTCATGAAGAGCCCCCAACAGGCTATATCCACGTCAGAGCAAGAAGGGGTCAGGCAACGGATAGCCACAGCCTTGCGGAGAGGGTACTGTACTCTCTTAACAACTTGAAATTATCGATGGCTGTGGGGCCCACTAATGTGCTGGCTGCCTTGAGTTTTATCTTCATGTCTCATTCTAATGTTGCAAGAAAATGGATTTCAGGTGAGAAGAGAGAAGATAAGTGAAAGGATGAAGGTGCTGCAACGGCTTGTGCCAGGCTGTGATAAGGTAGGTAAAGTAGCACTTCATGTCACACTTCTGTAGGACCAATAATTTTATTTTCCTTAAAAATAATATTGAAATAAGTTTATGACTTAACAACAACTCCTTTGTTATTTTTTGTGTGATTTGTGAAATGTGGTTGTGTTCTTGTAAGAATTGCCCTTTATACATTAGTTTTTTCCCATTTCTTCTGACAGCTTCATGTGGTTTGGTTTTTATCTAGGTGACTGGAAAGGCCCTTATGTTGGATGAAATAATCAATTATGTTCAGTCTTTACAGAATCAAGTTGAGGTACCCTTAACGGATTCAATTGTTTTTCTGATTAATACTTCACCTTGATTATTCATCATGGATTAGCTATATACCATTTGTATTATTCTAACAAGCTAGCTATGCCTGTAATTTCTGCAGTTCTTATCAATGAAGCTTGCTTCCGTGAATCCCATGTTTTATGACTTGTCAACGGATCTAGATACCCTCTTGGTTAGACCAGAGGTGAGGATTGATAAAGAAAACTAACAATTTCCTTGTTGACTGATCAAGTTAAACATGTCTAATCATGAGCTAACATGTTCTCTTTGAACTTTTCAGAAACTAAATAGCATGGCATCACCATCACCACTACCATGTGTGTCACATTGCAACAGCCCCAACGAAGCCACAACTTTTGCTGATACAACCACCATTACCCCCACCAACATCTTTCACAATGCCACTGACTATCTTTTGGATAATTCAGCTTCATTTTTTCTTCAAGGCCAGAGGTCAACTATGTTCTCTGAGGAGGTATAAACGCAATTAACCAATTTTCAATGTTAGAAAAAGAAAAAAAGGTTTTCTATACTACTACTACTATCATTATTTTTGCTGACAAAAACATCATTTTCAGGATACCGGTAGTCATTTCTGGGACGCAGAGGACCAGCGACAAAAGTTTCTTCATCCATATGGATTCAGCAACAACTTATGTTCCTTTCATTAATAAATTTTTTTCCCAAAGCTGCCCTAAAAAATTACGAAATTGATGTAAGTTTTCACATCCTATATCTTATTAGAACATTATAATATAACTCAATGATATGTGGTTCTGAGTCTGACCCTTTTTTTTAATAAAACTTCCTCAGGATTTAGCTTTTACACTAGGTAAGAAAACCCAAAGAGGAGCGAGAATGAGCCAAAAGGAAATTAGACATTAGGAGAAAAAACCAAAGCTACGCTTGGTATCGGTATAAGTACATCATTTCAGTCGAAGAAAAGGGTAATTGGTGGCGTAAAGAGTCTGGCTTGGTTCCTAGTCCATCAGATTAAAGTGACCTTTGAAGATGAATAAAGGGCACCAAAGTTAATGGATGAAGAACCAGAAGGACAGAAAATACCGACCAAATAAGACCATATCTTTTCTAGATCCATTGTTCTGTTCCAGTGATTTTTGACTCTCCAAGGACTTATGATGCACAAATTCCGAGAGACTATCAATCCTATACACAGAGCAATGTCATGTAAATTATCAAAGTATTGATTCTCGTGGTGGCAGTTATTCTGTTGGTACAGTTAATTTCACCATTATTGAGAAACGAGGGTTGATGCTACTGATTATGTTCTTGAAATGACTGGCCATGCATTTCTTTCTTGGTCTAGCTTTTATGTATATGTATCTGCAGAATCTTCATAGTTTTGGCATCCTTATGATTATTGTTGTTATATATTTATCCATCCACAGCCAAAGTTTCTATAACTAGATGTTCAACCTCAAACTGTCAGAGTTTAAAAATTAATAATGATTAATTTCGTATA