Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_09289 LG2 19844244 19845428 hypothetical protein
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of flavonol biosynthetic process, regulation of flavonol biosynthetic process, regulation of flavonol biosynthetic process, regulation of flavonol biosynthetic process
Cellular Component   located in   nucleus, nucleus
Molecular Function   enables   DNA-binding transcription factor activity, transcription cis-regulatory region binding, transcription cis-regulatory region binding, protein binding
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
SNP Position Effect Amino acid change
A/G 19844432 intron_variant
A/C 19844433 intron_variant
C/T 19844559 upstream_gene_variant
T/C 19844638 upstream_gene_variant
T/A 19844693 upstream_gene_variant
A/G 19844802 upstream_gene_variant
G/A 19844823 upstream_gene_variant
G/A 19844859 upstream_gene_variant
C/A 19844897 missense_variant p.Leu49Ile
A/G 19845080 missense_variant p.Asn110Asp
C/T 19845137 missense_variant p.Pro129Ser
T/A 19845271 missense_variant p.His173Gln
G/A 19845281 missense_variant p.Glu177Lys
C/A 19845416 missense_variant p.His222Asn

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_09289.1
MGRSPCCEKEHTNKGAWTKEEDERLINYIKLHGEGCWRSLPKAAAVSPPSTAAVPVATSSSNKKIHSDSINSSNTLAHDVVINNNINGNNSNGFHLVSHTGYANAITKVGTDEDSNSSSGVTVEESLPHHQINLDLSIGLPSSRQVSSSVNPEKLKAQEHDQKPHVLYNWYGNITGQSVCLCYSLGLQSDQACYCKGMGATATATTVTTTATDSNLYRFYRPMNI*


CDS Sequence:
>Vu_09289.1
ATGGGTAGATCTCCTTGTTGTGAGAAGGAACACACAAACAAAGGAGCTTGGACCAAAGAGGAAGACGAACGCCTCATCAACTACATCAAACTCCATGGCGAAGGTTGTTGGAGATCCCTCCCCAAAGCTGCCGCGGTTTCGCCTCCCTCCACCGCCGCTGTCCCTGTGGCAACGTCATCGTCCAACAAAAAAATACACAGCGACAGCATTAACAGCTCCAACACCCTCGCCCATGATGTTGTTATTAATAACAACATCAACGGTAACAACAGCAACGGTTTTCATTTGGTGAGCCATACTGGCTATGCCAACGCCATAACGAAGGTTGGAACCGACGAAGATTCTAACAGCAGCAGCGGCGTTACCGTGGAAGAATCCCTCCCTCACCATCAAATCAACTTGGACCTTTCCATTGGCCTTCCCTCTTCTCGGCAAGTTTCTTCTTCGGTGAACCCAGAAAAGTTGAAAGCGCAAGAGCATGATCAAAAACCGCATGTGTTGTACAATTGGTATGGGAACATTACTGGCCAGAGTGTTTGTCTTTGTTACAGTCTAGGGCTTCAAAGCGACCAAGCTTGTTATTGCAAAGGCATGGGTGCTACTGCTACTGCTACAACGGTTACTACAACTGCCACAGACAGTAATCTATATAGATTTTACAGACCCATGAATATTTAG


Promoter Sequence:
>Vu_09289::LG2:19842244-19844244(+)
ATAGAAAATTAAACAATAAAGTATTGTCATTTTCTAAAAAGCACACAGACATAATCTTTTTTCTCATCGTCATCATTTCTTTCTGTAAATAATGGCTGTAATTGAGTTAGAAAGATATAAAATATTCGTTGCACCAAACTTTACCTAAAATCAAAAACCCAAAATTCTTTTTCGTTGACTTTACACCTAATTTCATCTCCGTCCAAATCCAAAATTTATTTTCCTTCATTAATCAAAATGGAGTCGTCAAAACCTCAAATTAGGGTTTTGACGGCTGATTAAGATGGTGCTGTCTTCGAGACATTTTTCCATAAATCATGCTAATTGTATCTTGCAAGTAACTTATTTACAAAAATTTGAATAAGAAAGCTTCGAATTTCTATGTCCACAAGTTGTGATAATATATAATTATTTATTTCACTAAACATAGATGTTCAAAATTTATTGTTTAAAGATCAATGTAAAATTAATTACATTGATAAGTATTTGTAGTTTTAACCTTCAAATTGCTTTGTTTTTTCTTGCTTAAAGAATATACTATTTTCATGCACAAAAATTCTTTTAACTACATAAAATATCAATGATTACCAGTCTTATCTTTAATGCTTACAGTAATAAACTTTTATCTCAGAAATAATTTGTAATGAGTTGTGACGAAAGGAAAAAAATAAATAAATAAAAAACACCACATTAGCTAAGTTGTTTAATATATATATATATATATATATATATATATATATATAATTCTTGTTATTAGACTTATATTTTAAAAAAATTAGTGTTAAAGTATTTATTCAGATTAGTATCGATCACTATTTTCGATCATTTACTCCTTCTGACTTTTTAAATAAATTCAGTTCACTAGATTTTAATGATTAGGGAAATTGTTTAATTTTTTTTATTATATTAATCACAAGTGTAAAATGTTTATTACTTTTGAGAAAGACGGTTTTAAAGTGAAGAATTTGACTTTTTTGATAAAATTTCTCTTCCTAATTGTACTTTTTTATTCATAAAACTTAAATTGATGAGTTTTACTTTAAGAATTTTAGTCAAACCCCATTTTGTCCAATGATATATAGTAGCCAAAATGATTAAATTTAGTTAATGACACTAACATAAGATATTTATACATTGTAGATTTAAATATACTTCTAGTTTTATAAAATAAAAAATAATTATTTTTATTTAAAATTTATTTTCTATTTTTCAAATATTAAAATCGGTATTTTTGTTGTCTCTAGAAAGAAAGTGAATAAAATATTTTCGTTGAATTTTATATACCTGTGAGTGTGTCCTAATCCATTGAAACAAATTTTGAATTTTGAATAGAATTTTGTTTTATTAAATGGATTGTTTTAACAACCGTGTAAGTTGTGAAATTATTTTATTTATTTATATTGTTTTATGCATGGGAGTAAGTGAGGTATGATTGGAAAAATAGATTTGATTTAGTATTTATTAATATTTGAGAAGAAAGAAATATTATAATATAATGTTTTGAAATATATAGAGGTAAAAGTGAGGAAGAGTAATTAAGGGGAAAGGGAAGTAATAAAGTTAAAAGAAATAGTTAGTTAGAGTTGGTTAATTAGTATGAGGGGTGAAAGTGTGAATAGAGGAAAGAAGAGGGGGGAGATGGAAAAAAGAAGAAAGAGAGGAGAGAGAAAAAGAAGTTGAGGAACATGAAAAGCAGAGCTACCTACCAAATCCAGCACTAACTTAATTGTAACCACTCGTCTTTCTCACCAACTCGGTCAAATACTCTCTTTCTCTTTCTTTTTCTCTTTCTCTTACATTACATTACTTCTCAGAAAAAGAAGGTACCCGAGTCAATTGCACCTCCTCTTGTTCTCCACCACCTCCCATTTATATTCCTTCCACCCGCTTTTCTCACCAATTACTTTCCAGCTTCCATTCCCCACACACCACAACACAACACATCACAACACAAAACATCTTATTCTCTCTCTTTCTCTCTCACCAACCAACCACAACCA


Gene Sequence:
>Vu_09289(+)
ATGGGTAGATCTCCTTGTTGTGAGAAGGAACACACAAACAAAGGAGCTTGGACCAAAGAGGAAGACGAACGCCTCATCAACTACATCAAACTCCATGGCGAAGGTTGTTGGAGATCCCTCCCCAAAGCTGCCGGTAAACTTTTCAAATCAAATTCAATACCAATTCTTTTCTTTCTTTCTTTTACACTAACCCCATTTCTCCTTTCTCCTTTCTCCTTTCTCCTTTCTCCTAACAGGCTTGCTCAGATGTGGCAAGAGTTGCAGACTCAGATGGATTAATTACCTCAGACCTGATCTTAAGAGAGGCAACTTCACCGAAGACGAAGACGAACTCATCATTAACCTCCATAGCTTACTTGGAAACAAGTATTAACACCATCTTCCTTTTTTCCCTTCTTCTTCTTTCCAATCTCTCCCACACTGTCACATCATTTCAATTTTCCCAATCATAATTTCTCATTTTTCTTTTTCTTTTTTTCTCTCAGATGGTCTCTGATTGCCGCCAGGTTACCGGGCAGAACCGATAACGAAATCAAAAACTATTGGAACACTCACATCAAGCGCAAACTCTACAGCCGCGGAATCGACCCGCAAACCCATCGACCGATCAACGCCGCCTCCACCCCTCCGCCAACCGCAGCGGTTTCGCCTCCCTCCACCGCCGCTGTCCCTGTGGCAACGTCATCGTCCAACAAAAAAATACACAGCGACAGCATTAACAGCTCCAACACCCTCGCCCATGATGTTGTTATTAATAACAACATCAACGGTAACAACAGCAACGGTTTTCATTTGGTGAGCCATACTGGCTATGCCAACGCCATAACGAAGGTTGGAACCGACGAAGATTCTAACAGCAGCAGCGGCGTTACCGTGGAAGAATCCCTCCCTCACCATCAAATCAACTTGGACCTTTCCATTGGCCTTCCCTCTTCTCGGCAAGTTTCTTCTTCGGTGAACCCAGAAAAGTTGAAAGCGCAAGAGCATGATCAAAAACCGCATGTGTTGTACAATTGGTATGGGAACATTACTGGCCAGAGTGTTTGTCTTTGTTACAGTCTAGGGCTTCAAAGCGACCAAGCTTGTTATTGCAAAGGCATGGGTGCTACTGCTACTGCTACAACGGTTACTACAACTGCCACAGACAGTAATCTATATAGATTTTACAGACCCATGAATATTTAG