Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_09233 LG2 18052820 18056374 PREDICTED: systemin receptor SR160
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   anther wall tapetum cell differentiation, unidimensional cell growth, pollen exine formation, brassinosteroid mediated signaling pathway, regulation of seedling development, detection of brassinosteroid stimulus, pollen exine formation, anther wall tapetum cell differentiation, hormone-mediated signaling pathway, hormone-mediated signaling pathway, brassinosteroid mediated signaling pathway, brassinosteroid mediated signaling pathway, pollen exine formation, positive regulation of flower development, anther wall tapetum cell differentiation, detection of brassinosteroid stimulus, negative regulation of cell death, unidimensional cell growth, hormone-mediated signaling pathway, unidimensional cell growth, anther wall tapetum cell differentiation, positive regulation of flower development, brassinosteroid mediated signaling pathway, pollen exine formation, negative regulation of cell death, response to UV-B, positive regulation of flower development, positive regulation of flower development, brassinosteroid mediated signaling pathway, anther wall tapetum cell differentiation, leaf development, regulation of seedling development, brassinosteroid homeostasis, positive regulation of flower development, hormone-mediated signaling pathway, brassinosteroid mediated signaling pathway, leaf development, anther wall tapetum cell differentiation, brassinosteroid mediated signaling pathway, brassinosteroid mediated signaling pathway
Cellular Component   is active in   protein-containing complex, plasma membrane
Cellular Component   located in   endosome, plasma membrane, plasma membrane, plasma membrane, plasma membrane, plasma membrane, plasma membrane
Molecular Function   enables   steroid binding, protein binding, protein serine/threonine kinase activity, protein binding, protein serine/threonine kinase activity, protein binding, protein homodimerization activity, protein serine/threonine kinase activity, transmembrane receptor protein tyrosine kinase activity, kinase activity, protein binding, protein binding, protein binding, steroid binding, protein binding, protein serine/threonine kinase activity, protein heterodimerization activity, protein binding, transmembrane receptor protein tyrosine kinase activity, transmembrane receptor protein tyrosine kinase activity, protein binding, transmembrane receptor protein tyrosine kinase activity, protein binding, protein binding, protein binding, protein binding, protein binding, protein heterodimerization activity, protein binding, protein kinase activity, identical protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein serine/threonine kinase activity, protein binding, protein binding, identical protein binding, protein binding, protein binding, protein kinase activity, protein binding, protein serine/threonine kinase activity, protein binding, protein binding, protein kinase activity, protein binding, protein binding, protein binding, identical protein binding
Pathway   B 09132 Signal transduction   C 04075 Plant hormone signal transduction [PATH:ko04075]
SNP Position Effect Amino acid change
C/T 18052991 missense_variant p.Pro58Ser
C/T 18053086 synonymous_variant p.Ala89Ala
G/T 18053408 stop_gained p.Glu197*
A/G 18053433 missense_variant p.Lys205Arg
T/A 18053822 missense_variant p.Ser335Thr
A/G 18053846 missense_variant p.Ser343Gly
T/A 18054478 synonymous_variant p.Thr553Thr
C/G 18054482 missense_variant p.Leu555Val
A/T 18054485 missense_variant p.Ile556Leu
G/A 18054489 stop_gained p.Trp557*
A/T 18054686 missense_variant p.Thr623Ser
G/T 18055027 synonymous_variant p.Thr736Thr
T/C 18055096 synonymous_variant p.Ser759Ser
C/T 18055315 synonymous_variant p.Ala832Ala
G/A 18055816 intron_variant
T/A 18056226 missense_variant p.Met937Lys
T/A 18056230 synonymous_variant p.Ile938Ile
A/C 18056237 missense_variant p.Met941Leu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_09233.1
MKALYRGSLFLIFSFTLLFTGTPSSALSTRDPSQQLLSFKASLSNPSLLPNWLPNQNPCSFTGITCNQTHLTSIDLTSIPLSTNFSIVATYLLTLDHLQSLSLKSTNLTGPPTVPLSHSKCSSSLSSIDLSQNTLSGSLNDMSFLASCSNLQSLNLSSNLLEFNSSHWKLTLRVADLSNNKISGPGIVLWLLNPDIEHLALKGNKITGDVDFSGSTSLQHLDLSSNNFSVSIPSLGDCSSLKYLDLSANKYFGDIATTLSPCKALLYLNLSSNQFTGLVPSLPLGSLQFVYLAANHFHGLIPPALADLCSTLVQLDLSSNNLTGDLPGPFGACSSLQSLDISSNLFTGALPMEVLTQMGSLRELAVAFNFFGGPLPVSLSKLSSLELLDLSSNNFSGPIPGSLCGDAGNNLKELYLQNNRFTGFIPPMLSNCSNLVALDLSFNFLTGTIPSSLGSLSKLRDLIIWLNQLHGEIPQELMYMKSLENLILDFNELSGNIPSGLVNCTKLNWISLSNNRLSGEIPAWIGKLSNLAILKLSNNSFSGRIPPELGDCTSLIWLDLNTNSLTGPIPPELSKQSGNIAVNFINGKTYVYIKNDGSKECHGAGNLLEFAGISQQQLNRISTKNPCNFTRVYGGKLQPTFNHNGSMIFLDISHNMLSGSIPKEFGVMYYLTILNLGHNNVSGSIPQELGKMKNLNILDLSNNRLEGQIPQSLTGLSLLTEIDLSNNMLSGTIPETGQFDTFPAARFQNNSDLCGVPLSPCGSDPTNSPSAQHMKSHRRQTSLVGSVAMGLLFSLFCIFGLIIIAIETRKRRKKKEAALEAYMDGNSHSGPANVSWKHTSTREALSINLATFEKPLRKLTFADLLDATNGFHNDSLIGSGGFGDVYKAQLKDGSVVAIKKLIHELMKEDPNLEMELLQHLKIACSCLDDRPWRRPTMIQVMAMFKQIQVGSGIDSQSTIATDEEGFNAVEMVEMSIKEAPELSKH*


CDS Sequence:
>Vu_09233.1
ATGAAAGCCCTGTACAGAGGCTCTCTCTTTCTCATATTCTCCTTCACCTTGCTTTTTACTGGGACACCTTCTTCTGCACTTTCCACCAGAGACCCTTCTCAGCAACTCCTCTCCTTCAAAGCTTCTCTCTCCAACCCATCCCTGTTACCCAACTGGCTCCCCAACCAGAACCCCTGTTCCTTCACCGGTATCACCTGCAACCAGACCCACCTCACTTCCATAGACCTCACCTCCATACCTCTCAGCACCAACTTCTCCATTGTAGCCACCTACCTCCTCACCCTCGACCACCTTCAGTCTCTCTCCCTCAAATCCACCAACCTTACAGGCCCTCCCACCGTTCCTCTTTCTCATTCCAAGTGCAGCTCCTCCCTATCCTCCATAGATCTGTCCCAGAACACTCTCTCCGGTTCCCTTAATGACATGTCCTTTCTTGCTTCCTGTTCAAACCTCCAATCTCTCAACCTTTCTAGTAACCTTCTCGAGTTCAACTCCTCCCACTGGAAACTCACCCTCCGCGTAGCTGACCTCTCCAACAACAAGATTTCTGGTCCCGGCATCGTCCTCTGGCTTCTCAACCCCGACATCGAACACCTGGCGCTCAAAGGTAACAAAATCACCGGAGATGTCGACTTCTCAGGTTCCACTTCTCTACAGCACTTGGACCTTTCCTCCAACAACTTTTCCGTTTCTATTCCTTCCTTGGGCGACTGTTCCTCCCTTAAATACTTGGACCTCTCTGCCAACAAATACTTTGGCGACATTGCTACCACTCTCTCACCTTGCAAGGCTCTCCTCTACCTCAACTTGTCCAGTAACCAGTTCACTGGTCTTGTTCCTTCCCTCCCTCTTGGTTCTCTCCAGTTCGTCTATCTCGCCGCCAACCACTTCCATGGCCTGATTCCTCCTGCACTGGCGGACCTCTGCTCCACTCTCGTACAGCTGGATCTCTCTTCCAACAATCTCACCGGTGACCTCCCAGGCCCCTTTGGCGCTTGCTCTTCCCTCCAATCCTTGGACATCTCAAGCAACCTCTTCACCGGCGCTTTGCCGATGGAGGTATTGACTCAAATGGGCAGTCTGAGGGAGCTTGCGGTAGCCTTCAACTTCTTCGGCGGTCCTCTACCCGTGTCGCTGTCGAAGCTTTCCAGTTTGGAATTGCTGGATCTGAGTTCCAACAACTTCAGCGGGCCAATCCCTGGAAGTCTGTGCGGAGATGCTGGGAATAACTTAAAGGAACTTTACCTGCAGAATAACCGGTTCACGGGTTTTATTCCTCCCATGCTCAGCAACTGTTCCAACCTTGTTGCCTTGGACTTGAGTTTCAACTTTCTGACAGGGACCATCCCTTCAAGCCTAGGGTCTCTCTCGAAACTCCGGGACTTGATTATCTGGCTGAACCAGCTCCATGGAGAGATACCTCAAGAGCTGATGTATATGAAGAGCCTGGAGAATCTTATCTTGGATTTCAACGAGTTGAGTGGGAACATTCCCTCTGGCCTCGTCAACTGCACCAAGCTCAATTGGATCTCCCTCTCCAACAACAGGCTTAGCGGCGAGATACCAGCCTGGATTGGGAAGCTTTCCAATCTGGCCATACTCAAACTCAGTAATAACTCCTTCTCTGGCCGGATCCCCCCTGAGCTTGGCGATTGCACTAGTCTTATATGGTTGGATCTGAATACTAATTCCCTCACAGGGCCCATTCCGCCTGAACTGTCCAAGCAATCCGGGAATATTGCCGTGAATTTCATCAATGGGAAGACTTATGTGTACATAAAGAATGATGGGAGTAAAGAATGTCATGGAGCAGGAAACTTGCTGGAGTTTGCTGGTATCAGTCAGCAGCAGCTCAACAGGATTTCCACCAAGAACCCCTGCAATTTCACCAGGGTTTATGGAGGTAAGTTGCAGCCAACGTTTAATCATAATGGTTCTATGATATTTTTGGATATCTCCCACAACATGTTGTCAGGCAGTATTCCAAAGGAATTTGGGGTCATGTACTATTTGACCATTCTCAATCTGGGCCACAATAATGTGTCTGGGAGCATTCCTCAGGAGCTTGGGAAGATGAAGAATCTTAACATTCTTGATCTCTCTAACAATAGACTCGAAGGGCAAATTCCGCAGAGCCTTACGGGGCTCTCCTTGCTCACTGAGATTGACTTGTCCAACAACATGCTCTCGGGAACGATTCCTGAGACGGGTCAATTTGATACTTTCCCTGCTGCAAGGTTTCAGAACAACTCTGATCTCTGTGGTGTTCCTCTGTCTCCTTGTGGATCGGACCCGACAAACAGTCCGAGTGCACAGCATATGAAGTCTCACAGGAGGCAGACTTCTTTAGTTGGGAGTGTGGCCATGGGATTACTATTCTCCCTCTTCTGCATCTTTGGTTTGATCATAATTGCCATTGAGACCAGAAAGAGGAGGAAGAAGAAAGAGGCAGCCCTTGAGGCCTACATGGATGGTAATTCGCATTCGGGTCCAGCCAATGTGAGCTGGAAGCACACGAGTACTCGTGAAGCTCTTAGCATAAACCTTGCAACTTTTGAGAAACCCCTCCGAAAGCTTACTTTTGCAGACCTTCTTGACGCCACCAATGGCTTTCACAATGACAGTCTCATTGGCTCCGGTGGGTTTGGTGATGTGTACAAGGCTCAGTTGAAGGACGGAAGTGTTGTTGCTATCAAGAAGCTGATTCATGAGCTCATGAAGGAAGACCCCAATCTGGAGATGGAGCTTTTGCAGCACCTGAAGATTGCGTGTTCATGTTTGGATGATAGGCCATGGAGACGTCCCACCATGATTCAAGTTATGGCAATGTTCAAGCAGATTCAGGTAGGATCTGGGATTGATTCTCAGTCAACTATAGCCACCGATGAAGAAGGTTTCAATGCAGTTGAAATGGTGGAGATGAGCATTAAAGAAGCTCCTGAATTGAGCAAACATTAG


Promoter Sequence:
>Vu_09233::LG2:18050820-18052820(+)
ATTGATGCACAACTCACCTTTTATGTTTTATATAAAGACCTAAAGATGAAAACTGAAGAATACACAATAATTCAGAAGAAATTAATGCTTACAACCTTCTAATTTTTTGGTATTTAAGTGTAAAAGCAACCTTCAAATGTTTTGGTATTTAAGTGTTTTTGTGTGAAAATGTAAAAACTTTTATAATTTTTCCTGTAATAAATTTTATTTTTATGAACTTATGTTGATCTCTATTTTAGAGTTATTTTTTCATTTAAAAAAAAAGATTATAATAGTTTAATAAAAAGTGATTTATGTATTCATAATTATTCGATCATTTTTATATACTTGTTATTTGTTATAATATAGAGTGATGAACATACTCTTTACGATAATTTCATAAATAAAACCTTTTAATCTTTGTCTTGAGAGTGAACTAAACATTAATAATTTTTTAACTAAGATAATTTACTATATGGTATTTTGTTTATTTATTTACTAGTATAATTTAATTTGTTATAAAAAAAATTTAAATATCCTATTCAACATTTTTTGAAGTTAATTATGCCAACAAAAATAAAAATAAAAATATATAATATATTTAAAATATATAATATTAGGTTATAACGTATTTAAAAAATAATCTATTAGTTGATTATCTTTTATTTTTTAACTAAGCTTTTATCAATATATAAATTCATATTGAAGAGATTTTTAACTGCACAAATTTGAATTTGTCTCTTCTAAATTTAATATTTTACTAAATCATTACATTTTTACAATTCATGATGATTTAATAAGTGGATTATTCCTTTTCTTTTTTATTTGTATGACATAAGTTATAAGCTGTGTTTGTTTTTCTTTGATATAAGATGTAATATGCAATGTCTCTTGTATTAATTATTGTCAAACTTATCCTAAACTAAAAAAAAAAACAGAGAGAAGGTATTGGTAAACAATTAGAATAGAGAGAGGGAAATACCAATGATAAGAATATAAATGTAATAAAAAACTATTGTTATCAACTACAATTTTGTTTTCTTAATTTTATGAAATACATAGGTGAGTCTTCTAAATAAGAAAGAAATTACTTCACTCCTCTTAATAATTGTATTTTAAGGTATTTAAGAATCAAGACATAATTAAGATATTTACAGATAAATTATTATAATATTATTATTACGTCACATTAAATTTAGTAGCAGAAAAATACTATTTAGGCAAACAAAATAGTTAATTTAAAAAATGTTAAAGAAAATAATATGTCAAAAATAATTTCTTATAATAAAATTTTATTTAAGTTTAAACAACTCAGCTACTTATGAAGTAACTTTAAAGAAGTCAGATAATGAAGAAGCAACAAACGGAGTAGGAGAAAGAATTACAGGAGGACAATAAATTTGAGGGTTTTGAATAAGAGAAGAAGGGAATTGAAAATAAAAGAAAATGTTAAATGATACTATTATTATTATTATTGAATCTCCATAAGAATTATCTTACTAATAAGTAACAGTAGTTGAACAAATGATTAGGGTGTTCTGTGTGTTTAATGAAATATATTATTAATTGTGTTTCTCATTTAATACATTTTGGTTTATTAAAAGAGGAAGGAGAAGGTGAGATAGATAATATTAACTGAAGCGAGAATGGAGTGAGTGTAGATGAAAGCATGGAGAGGGGAAGGAGAGGGAGAGATGAAAACAAAGAGGAAGTTTTGGATTAAAGAAATTAAGGAACAGAGAGTGTCACATGGCATGTGAGCAACAACAGCTGTGTCCACTCTTCCACTTGATAAATACCCTTCTTACCTTCCTTACTACGACTTTTGACTATCCTTCTCTCTCTCTCTTTCATTCTATACTATTCATATCTCACACACACACACACTCTCCCTCTCTCCCTCTCTCCCTCTCTCATGGCAGAGCTCACAAGCTAAACACAGCCCCAACTGCTCTGAGAGGAACACAAACACAGACAAAGAAGCAGCACTCTGGTCTCTTTGGTATTACATCTGCCCAGAA


Gene Sequence:
>Vu_09233(+)
ATGAAAGCCCTGTACAGAGGCTCTCTCTTTCTCATATTCTCCTTCACCTTGCTTTTTACTGGGACACCTTCTTCTGCACTTTCCACCAGAGACCCTTCTCAGCAACTCCTCTCCTTCAAAGCTTCTCTCTCCAACCCATCCCTGTTACCCAACTGGCTCCCCAACCAGAACCCCTGTTCCTTCACCGGTATCACCTGCAACCAGACCCACCTCACTTCCATAGACCTCACCTCCATACCTCTCAGCACCAACTTCTCCATTGTAGCCACCTACCTCCTCACCCTCGACCACCTTCAGTCTCTCTCCCTCAAATCCACCAACCTTACAGGCCCTCCCACCGTTCCTCTTTCTCATTCCAAGTGCAGCTCCTCCCTATCCTCCATAGATCTGTCCCAGAACACTCTCTCCGGTTCCCTTAATGACATGTCCTTTCTTGCTTCCTGTTCAAACCTCCAATCTCTCAACCTTTCTAGTAACCTTCTCGAGTTCAACTCCTCCCACTGGAAACTCACCCTCCGCGTAGCTGACCTCTCCAACAACAAGATTTCTGGTCCCGGCATCGTCCTCTGGCTTCTCAACCCCGACATCGAACACCTGGCGCTCAAAGGTAACAAAATCACCGGAGATGTCGACTTCTCAGGTTCCACTTCTCTACAGCACTTGGACCTTTCCTCCAACAACTTTTCCGTTTCTATTCCTTCCTTGGGCGACTGTTCCTCCCTTAAATACTTGGACCTCTCTGCCAACAAATACTTTGGCGACATTGCTACCACTCTCTCACCTTGCAAGGCTCTCCTCTACCTCAACTTGTCCAGTAACCAGTTCACTGGTCTTGTTCCTTCCCTCCCTCTTGGTTCTCTCCAGTTCGTCTATCTCGCCGCCAACCACTTCCATGGCCTGATTCCTCCTGCACTGGCGGACCTCTGCTCCACTCTCGTACAGCTGGATCTCTCTTCCAACAATCTCACCGGTGACCTCCCAGGCCCCTTTGGCGCTTGCTCTTCCCTCCAATCCTTGGACATCTCAAGCAACCTCTTCACCGGCGCTTTGCCGATGGAGGTATTGACTCAAATGGGCAGTCTGAGGGAGCTTGCGGTAGCCTTCAACTTCTTCGGCGGTCCTCTACCCGTGTCGCTGTCGAAGCTTTCCAGTTTGGAATTGCTGGATCTGAGTTCCAACAACTTCAGCGGGCCAATCCCTGGAAGTCTGTGCGGAGATGCTGGGAATAACTTAAAGGAACTTTACCTGCAGAATAACCGGTTCACGGGTTTTATTCCTCCCATGCTCAGCAACTGTTCCAACCTTGTTGCCTTGGACTTGAGTTTCAACTTTCTGACAGGGACCATCCCTTCAAGCCTAGGGTCTCTCTCGAAACTCCGGGACTTGATTATCTGGCTGAACCAGCTCCATGGAGAGATACCTCAAGAGCTGATGTATATGAAGAGCCTGGAGAATCTTATCTTGGATTTCAACGAGTTGAGTGGGAACATTCCCTCTGGCCTCGTCAACTGCACCAAGCTCAATTGGATCTCCCTCTCCAACAACAGGCTTAGCGGCGAGATACCAGCCTGGATTGGGAAGCTTTCCAATCTGGCCATACTCAAACTCAGTAATAACTCCTTCTCTGGCCGGATCCCCCCTGAGCTTGGCGATTGCACTAGTCTTATATGGTTGGATCTGAATACTAATTCCCTCACAGGGCCCATTCCGCCTGAACTGTCCAAGCAATCCGGGAATATTGCCGTGAATTTCATCAATGGGAAGACTTATGTGTACATAAAGAATGATGGGAGTAAAGAATGTCATGGAGCAGGAAACTTGCTGGAGTTTGCTGGTATCAGTCAGCAGCAGCTCAACAGGATTTCCACCAAGAACCCCTGCAATTTCACCAGGGTTTATGGAGGTAAGTTGCAGCCAACGTTTAATCATAATGGTTCTATGATATTTTTGGATATCTCCCACAACATGTTGTCAGGCAGTATTCCAAAGGAATTTGGGGTCATGTACTATTTGACCATTCTCAATCTGGGCCACAATAATGTGTCTGGGAGCATTCCTCAGGAGCTTGGGAAGATGAAGAATCTTAACATTCTTGATCTCTCTAACAATAGACTCGAAGGGCAAATTCCGCAGAGCCTTACGGGGCTCTCCTTGCTCACTGAGATTGACTTGTCCAACAACATGCTCTCGGGAACGATTCCTGAGACGGGTCAATTTGATACTTTCCCTGCTGCAAGGTTTCAGAACAACTCTGATCTCTGTGGTGTTCCTCTGTCTCCTTGTGGATCGGACCCGACAAACAGTCCGAGTGCACAGCATATGAAGTCTCACAGGAGGCAGACTTCTTTAGTTGGGAGTGTGGCCATGGGATTACTATTCTCCCTCTTCTGCATCTTTGGTTTGATCATAATTGCCATTGAGACCAGAAAGAGGAGGAAGAAGAAAGAGGCAGCCCTTGAGGCCTACATGGATGGTAATTCGCATTCGGGTCCAGCCAATGTGAGCTGGAAGCACACGAGTACTCGTGAAGCTCTTAGCATAAACCTTGCAACTTTTGAGAAACCCCTCCGAAAGCTTACTTTTGCAGACCTTCTTGACGCCACCAATGGCTTTCACAATGACAGTCTCATTGGCTCCGGTGGGTTTGGTGATGTGTACAAGGCTCAGTTGAAGGACGGAAGTGTTGTTGCTATCAAGAAGCTGATTCATGTCAGCGGACAAGGGGACAGAGAGTTCACTGCTGAAATGGAGACTATAGGAAAAATTAAGCACAGGAACCTTGTTCCCTTGCTGGGATACTGCAAAGTTGGGGAGGAGAGGCTCCTGGTTTATGAGTATATGAAATACGGGAGCTTAGAGGATGTTCTCCATGATCAGAAGAAAGCTGGGATAAAGCTGAACTGGTCAATTAGAAGGAAAATTGCCATTGGAGCTGCTAGGGGATTGGCTTTTCTTCACCACAATTGTATCCCTCACATCATTCATAGAGACATGAAGTCAAGCAATGTTTTACTTGATGAAAACCTGGAAGCCAGGGTGTCTGATTTTGGAATGGCTAGGCTTATGAGTGCTATGGATACACATTTGAGTGTGAGCACCCTGGCGGGCACCCCGGGGTATGTTCCTCCCGAGTACTACCAGAGTTTCAGATGCTCCACTAAAGGTGATGTCTACAGTTACGGTGTGGTTTTGCTGGAGCTGCTAACTGGGAAAAGGCCAACGGATTCGGCTGATTTTGGTGACAATAATCTTGTTGGATGGGTTAAACAACATGCGAAGCTGAAAATAAGTGATATTTTTGATCAGGAGCTCATGAAGGAAGACCCCAATCTGGAGATGGAGCTTTTGCAGCACCTGAAGATTGCGTGTTCATGTTTGGATGATAGGCCATGGAGACGTCCCACCATGATTCAAGTTATGGCAATGTTCAAGCAGATTCAGGTAGGATCTGGGATTGATTCTCAGTCAACTATAGCCACCGATGAAGAAGGTTTCAATGCAGTTGAAATGGTGGAGATGAGCATTAAAGAAGCTCCTGAATTGAGCAAACATTAG