Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_09225 LG2 17695617 17699398 hypothetical protein
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   cellular polysaccharide biosynthetic process, cellular polysaccharide biosynthetic process, cell wall biogenesis, cellular polysaccharide biosynthetic process, cellular polysaccharide biosynthetic process
Cellular Component   located in   plasma membrane, mitochondrion, plasma membrane, plasma membrane
Molecular Function   enables   ATP binding, protein kinase activity, ATP binding, transmembrane receptor protein tyrosine kinase activity, transmembrane receptor protein tyrosine kinase activity, transmembrane receptor protein tyrosine kinase activity, transmembrane receptor protein tyrosine kinase activity, protein kinase activity, protein kinase activity
SNP Position Effect Amino acid change
G/T 17695705 missense_variant p.Ser703Tyr
G/A 17696004 intron_variant
C/A 17696107 missense_variant p.Cys638Phe
A/G 17696175 intron_variant
G/A 17696237 intron_variant
A/G 17696347 intron_variant
A/G 17696418 stop_lost p.Ter606Argext*?
T/C 17696612 intron_variant
T/A 17696620 intron_variant
G/A 17696949 intron_variant
T/A 17696988 intron_variant
C/A 17697007 intron_variant
G/A 17697008 intron_variant
T/A 17697015 intron_variant
C/T 17697019 intron_variant
T/A 17697038 intron_variant
C/T 17697066 intron_variant
C/T 17697087 intron_variant
A/C 17697311 missense_variant p.Ser550Ala
C/A 17697318 synonymous_variant p.Thr547Thr
C/A 17697523 missense_variant p.Gly479Val
G/T 17697809 missense_variant p.Pro440His
A/T 17697844 stop_gained p.Tyr428*
T/C 17697946 intron_variant
G/A 17697960 intron_variant
A/T 17698065 intron_variant
A/G 17698201 missense_variant p.Ser400Pro
C/A 17698202 synonymous_variant p.Val399Val
G/T 17698439 missense_variant p.Asp320Glu
G/A 17698570 missense_variant p.Leu277Phe
C/T 17698787 missense_variant p.Met204Ile
G/T 17698832 synonymous_variant p.Thr189Thr
G/A 17699130 missense_variant p.Ala90Val
C/A 17699308 missense_variant p.Asp31Tyr
G/T 17699310 missense_variant p.Thr30Lys
A/G 17699328 missense_variant p.Ile24Thr

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_09225.1
MQSSQTQVLLQLKKHLEYPRQLEIWRDRWTDLCSVSSSGQVNVTCKDNFVTELSILGDKPTEGRDFDGFAIPNQTLSDSFSMDSFVATVARLTSLRVLSLVSLGMWGPLPDRIHRLYALEHLDLSFNYLYGSIPPKICTMVNLQTLGLGDNFFNGTIPNVFNSSSNLSVLSLRNNMLKGPFPPSILSVTSLKDIDMSSNQISGMLQDFSALSSLEQLDLGENKLESFLPAMPKGLISLFLGRNSFSGEIPKRYGQLNRLQKLDVSFNALTGTAPAELFSLPNISYLNLASNMLNGPLQSHLKCSSQLTFVDISYNRLVGDLPSSLSTRSDNRVVKSDGNCLSGGVQHQHSVSYCTEAHVKKKSYRVGIFVGVIVGVLLISVVLALTIVITCKKFFLQGVSEQHLLHKTVQDSSYAAGFSSELVTNARYISEIAELSREDLPTCRSYSLEELKEATNNFDNSTFMGENIYGKLYRGKLQSGIQIVIRSLPVSKKYSVRNFKLRLDLLAKLRHPHLVSLLGHCIDGVVGENNETNVFLIYEYVPNGTFQTYLSGHSSGKVFNWSERLSVLINIAKAVHFLHTGMIPGFFKNRLKSDNILLSENWMAKLSDYGLSIISEEADACGVKGESPNSWQMKMLEDDVYSFGFILLEALVGPSVSAERVTAVSNVMATFNSQDGWKGIVDPVVQATCSKESLFVVISITNKCISPESWNRPSIEDVLWNLQYASQIQATDDG*


CDS Sequence:
>Vu_09225.1
ATGCAGTCCTCTCAGACCCAAGTGCTTCTTCAGTTGAAAAAGCACTTGGAGTACCCAAGACAATTGGAAATATGGAGAGATCGTTGGACAGATCTTTGCTCTGTTTCTTCTTCTGGGCAAGTGAATGTCACATGCAAGGACAATTTTGTCACTGAGCTCTCCATCTTGGGTGATAAGCCAACCGAGGGTAGAGATTTTGATGGGTTTGCCATTCCAAATCAAACACTATCAGATAGCTTCTCCATGGACTCTTTTGTGGCTACAGTGGCAAGGTTAACCAGCCTGAGAGTGCTTAGTCTTGTCTCTTTGGGCATGTGGGGACCACTTCCTGATAGAATTCACAGACTCTATGCACTTGAACATCTGGATTTGAGTTTCAATTATCTTTATGGATCAATCCCTCCTAAGATTTGCACAATGGTGAACCTTCAAACTCTTGGATTGGGTGATAACTTCTTCAATGGAACAATCCCGAACGTGTTCAATTCATCAAGCAATCTCTCAGTTCTTAGTTTGAGGAATAACATGTTGAAGGGTCCATTTCCACCTTCAATCCTTAGTGTCACCTCTTTAAAAGACATTGACATGTCAAGCAATCAAATATCAGGGATGCTGCAAGATTTTAGTGCTTTGAGTAGCTTGGAACAGCTAGATTTAGGAGAAAACAAATTAGAGTCTTTCCTGCCAGCAATGCCAAAAGGGTTGATTAGTCTTTTCCTCGGAAGAAATTCCTTCTCAGGTGAAATTCCCAAGCGCTATGGTCAACTTAACAGGCTTCAGAAGCTTGATGTTTCCTTCAATGCACTCACTGGCACTGCTCCTGCTGAACTTTTCTCTCTGCCAAACATCAGTTACTTGAATTTGGCTTCCAACATGTTGAATGGACCACTGCAAAGTCACCTAAAATGTAGCAGCCAACTTACATTTGTTGACATATCATACAATAGGTTAGTGGGGGACTTACCTTCTTCACTGAGCACTAGATCAGATAATAGAGTCGTTAAGAGTGACGGAAACTGTTTATCTGGGGGAGTGCAGCATCAGCATTCAGTATCCTACTGCACAGAAGCTCATGTCAAGAAGAAATCATATAGAGTTGGAATTTTTGTTGGTGTCATTGTAGGAGTTCTTTTGATCTCTGTGGTTTTGGCTTTGACCATTGTCATAACTTGTAAGAAGTTCTTCCTTCAAGGTGTGTCAGAGCAGCACCTATTGCATAAAACAGTTCAAGATAGCAGCTACGCGGCAGGGTTCTCCTCTGAGCTTGTGACAAATGCAAGGTATATTTCTGAAATTGCAGAGTTAAGCAGAGAGGACCTCCCCACATGTAGGTCTTATTCTTTGGAAGAGCTAAAGGAAGCCACAAATAACTTTGATAACTCTACTTTTATGGGTGAAAATATATATGGGAAGCTTTACAGAGGAAAACTGCAGAGTGGGATACAGATTGTAATAAGGTCCCTGCCTGTGTCAAAAAAGTATTCAGTTAGAAATTTCAAACTGAGGTTGGATTTGCTTGCAAAGCTCCGTCACCCTCATTTGGTATCCCTTCTTGGTCACTGCATTGATGGTGTTGTAGGAGAGAATAATGAGACAAATGTCTTTCTAATTTATGAATATGTGCCAAATGGGACTTTTCAAACGTATCTCTCTGGACATAGTTCTGGCAAGGTTTTCAACTGGTCTGAGCGATTATCAGTACTAATCAACATTGCTAAGGCTGTCCACTTCCTACACACTGGCATGATACCTGGTTTCTTCAAAAATCGACTTAAGAGTGACAATATCTTGCTGAGTGAGAATTGGATGGCAAAGTTGAGTGACTATGGATTGTCCATTATATCAGAAGAAGCTGATGCATGTGGGGTAAAAGGAGAAAGTCCTAATTCGTGGCAAATGAAAATGTTAGAGGATGATGTGTATAGCTTTGGATTCATACTACTGGAGGCACTGGTTGGACCTTCAGTATCAGCTGAAAGAGTAACAGCTGTGTCGAATGTAATGGCAACTTTCAATAGTCAGGATGGGTGGAAAGGGATTGTGGACCCAGTTGTGCAAGCTACTTGCTCAAAAGAATCTCTTTTTGTTGTGATTTCCATAACAAATAAATGCATATCTCCTGAGTCATGGAACCGACCATCCATTGAGGATGTTCTTTGGAACCTTCAGTATGCTTCTCAAATTCAGGCAACAGATGATGGATGA


Promoter Sequence:
>Vu_09225::LG2:17699398-17701398(-)
ATTATAGAAGTCACTAATAAATAATTTATAAAATTATAAAAGTTATTAATTGATAATTAATAGATCATACCTAATTATAAGTTAGTTATAAGGTTTATAAACATATGTTGGACATGGAAATAGGAAATAAAAGATGATCTTTTTTTACAACACATATTATATAATTATTGAGCAAAATTATTAAATTAAGTATCAAAATATTTTTTGCACTTAACTCTCAATTGTATCCAACGACTAGAAAAGATTCAGAAATTATTTAGCGATCAAAATCTGAAAACATAAAATTATTCGAATAAGGATGCTGATCCTTTACGCATCAATTTTCTTTATTATCCAAGACATATGAGTAATGTTTATTATGAAGATGTATGAAGAGTCATTTTATACAAACTATTAAAAAAATGTAAAAATTAAGTGATGCAGGATTATATATCTTTCATAACAGTAACGTTGTATAATAAAATATCTAAATTTCTTTCAATGAAATATTATTTTGGCATTCAAATTTTCAAACAAAGACAAGAAAATGTTTACATTTATCTCAATCAACCATCCATGTAAAATAGATTGAAAGGATGGTCTCATCATATTATTATTATTATTATTATTATTATTATTATTAGTAATAAATATTATTTACTCTAACTATAAAATCTCATAATTTTAGCATTAAAATAAAATGATGAGATAAAATAATAATTATATAACTTAATTAAAAAAATTAAACAGTATAAATATAATTAAAAATATAATTTTTAAATATTTAATAATATAACAAAATTGAATAGAAACCCAATTAAATTTAAAATATATAAACCCATATTCATCATCAATGATAATTTGATTGAATATCAACTAATCAAATGTTAAGTCTGTGATCAGTTTTCATCAACTAAATACTCAGAAATCTGAATGTCCAGTGCAGTTTCTTGCAGTTCCCTGAATCCCAAGTAATGCAAAAATCAGAAAATGGTAGCAAAGGTTACAAATGTAGACATAGTTCTACAATGATTGTGGGGCCCTTATAGCATGGCACCTCTAGTTTGTTAGATAGATACCACAGACACAAGTGTATATATAGTGTATCATATGGCCCATCACACCGTGTTTTATTTGTTTGTTTTCTGCTGTTAACACATAACAACTTATGATGATCTATTCCATGTTTATTGGCTAGAACATCTTACCCAAGAAGTCCTCAAATTTCACCAATATCCTTTTTTTGTAAAGAGTTGAATTAGAAACCATAAAAAGTTTGAACTTTAGCTGAAACAATATATTATGTAGATAGTCCTTTGTTTCTTCTCATCAGAACAGTTTCGTTTCCCTCCTCCTACTTTTCTCACAGAAGAACATTTCATATTACCCTTTTCCTCTGGCACTCCCATTATTGCTATTTGGTGGAGAGAGCACAGTGGGAAATAACACCATGTGGAAGCAGTAAATGCATTTACTTCAGGTACCCCACTTTCATATATCGGATTCTGAGCAAAGATCACTGCTTGATCTTTCTCTTGTTCAATACTGATTTACATCTGATTTTTAAGAGAAAGCTTTGTGCAGATGTTATTAATGTTGCTCTTTCTCTTTACCCTCATACTACTTTTCCTTCATTCATAGTCATAACCAAAGCTTATCTTGCTACATTCTGTTCATTAATGTTTGCACAACCAACTCTGTTGAACAATTGAAATGGTCAAAGATATTTAAGCTCATATGAGGTATCAGTGAATTACAACGTCTGTGCAAGTCATCTTCATCTTATTGTTAACATTATCTTTTTATGGGGTGGTTAAAAGTTTTCAATAATTTTAATGGGACTTGTTTTACATTTGTTTAAGGCAGGTTTTCCATTGGGTTGTTTACACGAGCAAGCTGCTCCTTGCTCCTTGATGCAGTGTCCAAAGAAGAGTAGAACTTTCCTCATGGGATTTCATGACTTTGTTTTGCTATTCTGTTCATTTTGGTGTGTCTTTTTTGTAAGTAGTTGCAGTGCTCAG


Gene Sequence:
>Vu_09225(-)
ATGCAGTCCTCTCAGACCCAAGTGCTTCTTCAGTTGAAAAAGCACTTGGAGTACCCAAGACAATTGGAAATATGGAGAGATCGTTGGACAGATCTTTGCTCTGTTTCTTCTTCTGGGCAAGTGAATGTCACATGCAAGGACAATTTTGTCACTGAGCTCTCCATCTTGGGTGATAAGCCAACCGAGGGTAGAGATTTTGATGGGTTTGCCATTCCAAATCAAACACTATCAGATAGCTTCTCCATGGACTCTTTTGTGGCTACAGTGGCAAGGTTAACCAGCCTGAGAGTGCTTAGTCTTGTCTCTTTGGGCATGTGGGGACCACTTCCTGATAGAATTCACAGACTCTATGCACTTGAACATCTGGATTTGAGTTTCAATTATCTTTATGGATCAATCCCTCCTAAGATTTGCACAATGGTGAACCTTCAAACTCTTGGATTGGGTGATAACTTCTTCAATGGAACAATCCCGAACGTGTTCAATTCATCAAGCAATCTCTCAGTTCTTAGTTTGAGGAATAACATGTTGAAGGGTCCATTTCCACCTTCAATCCTTAGTGTCACCTCTTTAAAAGACATTGACATGTCAAGCAATCAAATATCAGGGATGCTGCAAGATTTTAGTGCTTTGAGTAGCTTGGAACAGCTAGATTTAGGAGAAAACAAATTAGAGTCTTTCCTGCCAGCAATGCCAAAAGGGTTGATTAGTCTTTTCCTCGGAAGAAATTCCTTCTCAGGTGAAATTCCCAAGCGCTATGGTCAACTTAACAGGCTTCAGAAGCTTGATGTTTCCTTCAATGCACTCACTGGCACTGCTCCTGCTGAACTTTTCTCTCTGCCAAACATCAGTTACTTGAATTTGGCTTCCAACATGTTGAATGGACCACTGCAAAGTCACCTAAAATGTAGCAGCCAACTTACATTTGTTGACATATCATACAATAGGTTAGTGGGGGACTTACCTTCTTCACTGAGCACTAGATCAGATAATAGAGTCGTTAAGAGTGACGGAAACTGTTTATCTGGGGGAGTGCAGCATCAGCATTCAGTATCCTACTGCACAGAAGCTCATGTCAAGAAGAAATCATATAGAGTTGGAATTTTTGTTGGTGTCATTGTAGGAGTTCTTTTGATCTCTGTGGTTTTGGCTTTGACCATTGTCATAACTTGTAAGAAGTTCTTCCTTCAAGGTGTGTCAGAGCAGCACCTATTGCATAAAACAGTTCAAGATAGCAGCTACGCGGCAGGGTTCTCCTCTGAGCTTGTGACAAATGCAAGTACGTTTTCTTCATTCATAAATGGCCAAAACAAGGCTTTAAATTGTGATCACATTCGCAGTTTTGTCACAATGCTGAATATTGTAGGACAGTGTAGACAAATATAGCTGATGTAGATGCAATTGTTGTTGTTGCATTGCGATTGAATGAAAACTGTTTCTTAAAACCCTTAGATGAAAATATGGATATACTCATGCATATATGAAAAATTGTGGGACATGTACATTAACTTCATATTTTTGTTTTCCCTTTGGGCTTACTATTTTCAGGGTATATTTCTGAAATTGCAGAGTTAAGCAGAGAGGACCTCCCCACATGTAGGTCTTATTCTTTGGAAGAGCTAAAGGAAGCCACAAATAACTTTGATAACTCTACTTTTATGGGTGAAAATATATATGGGAAGGTAGTGTCCAAATCCTATTTTTAAAAGAAGAGTTAAATTGTTGAGAGTTGAGACTTGTTGAATGTGACATTTGGGTTTTGATGTTTGAAAAAACAACTAAGCTATAATGATCTATCTTTTCTTTTTGTCAGATGAGATACTAATGAAAATTTCTCCCAAATTTTGCAGCTTTACAGAGGAAAACTGCAGAGTGGGATACAGATTGTAATAAGGTCCCTGCCTGTGTCAAAAAAGTATTCAGTTAGAAATTTCAAACTGAGGTTGGATTTGCTTGCAAAGCTCCGTCACCCTCATTTGGTATCCCTTCTTGGTCACTGCATTGATGGTGTTGTAGGAGAGAATAATGAGACAAATGTCTTTCTAATTTATGAATATGTGCCAAATGGGACTTTTCAAACGTATCTCTCTGGTAAGAGTATACTGTTTCTTTCACTTTCTTAATGGTTACTAAAATCCCAAGTCATTTAAGCTAGTATCATCATCATCATACAAGCGTCTAAAAGCAGAACATCAGTCAAATAAACTGCTATATTCAACTACATGAAGGAACTTCTAAATTCTAATTGTTGAATCCACCGATTCTTGTCTTAAAATATGTGAATCTGAAACTCTTTCATTAGTCAATACTAGCACTAACTTCCGTGTAGTATGGCATTTCACCTGCCATGTCTGGAACATAACTTCATTTCTTAATTAAGAAAAGGTGACCGAATATCAAAGTACGAGCCATAAACTATACATTAAAGTAGTGGTTTTCACATGAATGACATTATTCTGACAAGTAAATGCAGAAGTTTACAAGAAATATGAAATATCCTCCTTGTATTGTAGCAGAGTGTGGTGTATCTCTGATGGGAAATGGGGTTTAATATTATGGCTTTCTTTTCTTGTTTTCTGTCAATACCATGTGGTAGCTGTGCTAAGTGGATAATGGCATCTTGGAATATTAAAATAGCTTTAGAATCCATTCGAAGAGTGAAACAAGCTTGGTTTTCCAACTTGCATTCAGACCCTCAAATTGAAATATAATATGCATTAGAAAGTTGAAAGTAAATCTCTGGTCCCCACCAACTAGTTTGTGAAGCTGTTTATACTGAGAACTAAATTTAAGTGTGACAAATTGCATGTGCAGGACATAGTTCTGGCAAGGTTTTCAACTGGTCTGAGCGATTATCAGTACTAATCAACATTGCTAAGGCTGTCCACTTCCTACACACTGGCATGATACCTGGTTTCTTCAAAAATCGACTTAAGAGTGACAATATCTTGCTGAGTGAGAATTGGATGGCAAAGTTGAGTGACTATGGATTGTCCATTATATCAGAAGAAGCTGATGCATGTGGGGTATGATTGCACTCTTTTTTTTTTCTTTTTTTTTCCCTTTATTTGTGTTCTTGAAAGACCTTGTTTATGTCTTGTTTTTTCTATTTTGTAGGTAAAAGGAGAAAGTCCTAATTCGTGGTAAGAATTCCCAGATATCATATGCCTTTTTTTCTTTTCTTTTCTTTTCATAATCCTTTCAAGATCCAATGTCCTCTCTCTCAACATTCTTTGAGGTTTATGTGTCATGATGTTTTTTCAGGCAAATGAAAATGTTAGAGGATGATGTGTATAGCTTTGGATTCATACTACTGGAGGCACTGGTTGGACCTTCAGTATCAGCTGAAAGAGTAACAGCTGTGTCGAATGTAATGGTATGCACAAAAGATGTTCAGATAACATATTATCTTCCAATCACAAGCCATAATGAAATGCCCTACAATACCATCACTACAAGTCTTACACAAAATGTTTGGAAACGATTAAACCTTGAGAAATAACTGCTTATTTTCAAAAGCTTTCATAAAATTTATATAATTTTTTACCAAGGTAGGTAATTTAGCACACTCAATTTTGCAGGCAACTTTCAATAGTCAGGATGGGTGGAAAGGGATTGTGGACCCAGTTGTGCAAGCTACTTGCTCAAAAGAATCTCTTTTTGTTGTGATTTCCATAACAAATAAATGCATATCTCCTGAGTCATGGAACCGACCATCCATTGAGGATGTTCTTTGGAACCTTCAGTATGCTTCTCAAATTCAGGCAACAGATGATGGATGA