Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_09062 LG2 14568555 14569211 PREDICTED: LOB domain-containing protein 25-like
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/A 14568938 synonymous_variant p.Leu92Leu
G/A 14568943 missense_variant p.Ser90Phe

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_09062.1
MASSSSYNSPCAACKFLRRKCLSGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDSANADLLRYAYNDMPSPSLSVPPAMTATTIQQIPQRSFNARFGNEASGLYRPSPTITYNSYPYSLPWTDTSPEDINDGGGEGGGNNL*NVFEE*YCLSRVYAS*GHVPCNIYNM*


CDS Sequence:
>Vu_09062.1
ATGGCATCATCGAGCTCCTACAATTCTCCTTGTGCTGCCTGCAAGTTCTTGAGGAGGAAATGCCTTTCAGGGTGCATCTTTGCACCATACTTCCCACCGGAAGAGCCTCAGAAGTTCGCGAACGTGCACAAGATATTCGGTGCCAGCAATGTGACGAAGCTTCTGAACGAGCTTCTTCCTCACCAGAGGGAAGATGCAGTGAATTCCCTTGCCTATGAAGCTGAGGCACGTGTGAGAGACCCAGTTTATGGGTGCGTAGGAGCCATCTCTTTTCTGCAGAGACAAGTTCAAAGGCTCCAAAAGGAGCTTGATTCTGCCAATGCTGATCTCCTTCGCTATGCCTACAATGACATGCCTTCACCCTCTCTTTCTGTGCCACCAGCAATGACAGCAACAACAATTCAACAAATTCCCCAAAGGTCTTTCAATGCAAGGTTTGGAAATGAAGCAAGTGGGCTTTATAGGCCCTCTCCCACCATCACTTACAACTCCTACCCTTATTCTCTTCCATGGACTGATACCTCTCCTGAAGATATCAATGATGGAGGAGGAGAAGGAGGAGGTAATAACTTGTGAAATGTCTTTGAAGAATAATATTGCCTATCTAGGGTTTATGCCTCTTGAGGGCATGTCCCCTGCAATATTTATAATATGTAG


Promoter Sequence:
>Vu_09062::LG2:14569211-14571211(-)
ACATTATGTACAATGGTTAACTTTGAGCAAATTGCTACCTTAAAGTAAATGAACAATTATTGGGGAGAAAGTGGTTAAATTTCTCAAAATTTATTGAGTTATGTTATATATTGATTTATAGTATTTTTTATAACCCTTTTGAAATTATTTTGATTTTGATTTTTCTATAACACATGGTGGATTTGATCTGATTGTTGAGTGTGTTGTCTTAAACCTAAAAACGAAAAGAAATGGTTTAGTGAATTTAGTTGAAGTGCATGGTTAATTAGAAAGGGAATGAGAATGTGAGACATGGGCACATAATTCCCCATATTATTATTAGATGGAAGGTCATAGTCATTCTTTTATAGTGTACCTCCATTTATTACCTTTGTCTTTTGCATCCATTCCTTCTCCATCCACTCAATGCTGTTTGCCTTCTCTCCCTCATAAACTTTTCCCACTTAATTATCACCTTCACACTCTTCTCTCTTTATCTCTCACTTTGTGTATCTCTTTGCAGTTAGGGTTTCCTCTTTAAGGGTGCTCTTCCTGTCACAAATCTGCAACTTATATCTTTCATTGGCTAAGCCTCTTTTGTCTTCTCAGGGTAAAAGAGCAGCTTCTAAAGCCCCTCCCACAAGGGAAAAAAAGGTACTTCCCTTTTAGTTCTTCTCATCAACCAAACCTACATCACAAACAGGTAAAATCATGTTCATGTTCTAGCTTCTTCTCTCTATGCATCTATAGTTCTTTTCTCTGTTTCATCTTCTTTTAAGTAAAGTACCGGGTGCTAGCTAGACAAAATGGATCCTTTTGAGAACTCACTGTTTAGGGCTTCTTCTTTTTTCTTTTCTTTTTTCATTTTACATATGCTTTTTTTATGCAGTCATGCCTCGTTGCTGCAGCCAGATCCCTGGTTAATTCAACTCACTTAATTATAAGCTTTTTACTTTATCATGCAGCTCAATTCCAGCAGAAGAAAGATATATATATATATATATATATATATATATATATATATATATATATACATATAAAGTTTTCTTGTCTGTGTTAGAGTGTGCAAGTTTCTGATGAACAAACCTGGAAGAAGATAGAACATACACAGAAACTTATATGGGGGGAAAATTAGAAAACAGTATGAAGGGAGTTTCAAGATTAAAATTAAGAACTCCTCATTGTCTTTTTTTTTCCTCCTCAAGAATAGAAAAAAGAAGCCAGAACGGAAAGAAGGAAAATATATTTTAAGAAAAGAAATAAGAAAGTTTGTTAAAGAAAAAGAAAGGATAAAGATGGTCATACTATAATTTAATATAATATAATTTAAAGAAAGTGACAACTAATCCTTAAATTTAAACCAGTTACAATGTTTTGGGTACGTATATGTTTGTAATGGGGAAGGGTCTTAAGAGATCTCAGGAAGAAAGGATTACGAAGGGTTAAAAGATCCTACTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTCTGCTTCTAATAATATTCAATGATTATATGGATACATATAGTTGATACCTTTGATCGAAGAAAGAACTTAAACACGAACTTGACAAGAAAAAAAAAATATAACTGAAGTAATCAGATCTAATTTTGTTTTTCTTTATTTTTTACCATTCATTTTCATAATAATTTTGGAAATGAAAATGAGAGAACAATACACTGACTATTTGTCAGTCTTCTACCTCTTTCTATATATATAAAATTATAGTTGGAGTTCTATTCAATGTTAACTCACTAAAGTTATAAGAAATATGAAATTTCACCATAAATTTTCGTAGATGTTGGTGGTCCTATATCTTGTATAAGGGAGAACTTTCTTCTGATCTAAACTTTTGGTCTTTAAAATATGAAAGAGAAGAAAAAAAAAGTCTACACAGTGGAGAAGGGAAAGTTGTGTTAATTGATTTCATTTCATGTGAATCTTTTTTCCTTTTAGGGAAATTGAAAA


Gene Sequence:
>Vu_09062(-)
ATGGCATCATCGAGCTCCTACAATTCTCCTTGTGCTGCCTGCAAGTTCTTGAGGAGGAAATGCCTTTCAGGGTGCATCTTTGCACCATACTTCCCACCGGAAGAGCCTCAGAAGTTCGCGAACGTGCACAAGATATTCGGTGCCAGCAATGTGACGAAGCTTCTGAACGAGCTTCTTCCTCACCAGAGGGAAGATGCAGTGAATTCCCTTGCCTATGAAGCTGAGGCACGTGTGAGAGACCCAGTTTATGGGTGCGTAGGAGCCATCTCTTTTCTGCAGAGACAAGTTCAAAGGCTCCAAAAGGAGCTTGATTCTGCCAATGCTGATCTCCTTCGCTATGCCTACAATGACATGCCTTCACCCTCTCTTTCTGTGCCACCAGCAATGACAGCAACAACAATTCAACAAATTCCCCAAAGGTCTTTCAATGCAAGGTTTGGAAATGAAGCAAGTGGGCTTTATAGGCCCTCTCCCACCATCACTTACAACTCCTACCCTTATTCTCTTCCATGGACTGATACCTCTCCTGAAGATATCAATGATGGAGGAGGAGAAGGAGGAGGTAATAACTTGTGAAATGTCTTTGAAGAATAATATTGCCTATCTAGGGTTTATGCCTCTTGAGGGCATGTCCCCTGCAATATTTATAATATGTAG