Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_09020 LG2 13834592 13836008 PREDICTED: dof zinc finger protein DOF5.6-like
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/G 13834709 intron_variant
G/A 13834767 intron_variant
C/T 13835352 missense_variant p.Pro121Ser
G/A 13835690 synonymous_variant p.Leu233Leu
C/A 13835717 synonymous_variant p.Pro242Pro
G/T 13835751 missense_variant p.Gly254Cys
T/G 13835768 missense_variant p.Asn259Lys
G/A 13835769 missense_variant p.Gly260Ser
G/C 13835772 missense_variant p.Ala261Pro
A/G 13835779 missense_variant p.Asn263Ser
C/T 13835780 synonymous_variant p.Asn263Asn
C/T 13835783 synonymous_variant p.Tyr264Tyr
C/T 13835849 synonymous_variant p.Ile286Ile
C/T 13835927 synonymous_variant p.Ser312Ser

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_09020.1
MGLSSLHVCMDSSDHWLQGTIHEESGMDSSSSPSGDMLTCSRPMIERRLRPPHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSAKKSNDHPLVNNQISQTQPPPSSYHHNPKDLQLSFPDVQFSHLSNLLGTNAGSLGNPSFMEGKYGIGMIENPRPIDFMMESKLEGIIGSGSSRNFDFFGNSDMGMGAGLGDMHGNAQNGLPPNFHGLCPSAFGGMSMSLDGNNTGNGANNYLMDSCQRLMLPYDANEDHNASIDVKPNPKQLLSLEWQDQGCSDAGKDSFGYLNGPGSWTGMMNGYGSSTTNPLV*


CDS Sequence:
>Vu_09020.1
ATGGGGTTATCTTCTTTGCACGTCTGCATGGATTCGTCAGATCATTGGTTGCAGGGCACAATTCACGAGGAGTCTGGAATGGATTCTTCTTCTTCACCCTCTGGGGACATGCTTACATGCTCAAGGCCCATGATAGAGAGGAGGCTAAGACCCCCACATGACCAAGCTCTAAAGTGCCCCAGGTGTGACTCAACCCACACCAAGTTCTGCTACTACAACAACTACAGTCTCTCTCAGCCAAGGTACTTCTGCAAGACCTGCAGAAGGTACTGGACCAAAGGAGGCACTCTTAGGAACATTCCTGTTGGTGGAGGCTGCAGAAAGAACAAGAAAGTCTCTGCAAAAAAATCCAATGACCACCCATTAGTTAACAATCAAATTAGTCAAACACAGCCCCCACCCTCCTCCTACCATCACAACCCCAAAGACCTTCAACTCTCTTTTCCAGATGTACAATTTTCCCACCTCAGCAACTTGCTTGGGACGAATGCAGGGTCACTGGGAAACCCTAGCTTTATGGAGGGTAAGTATGGTATTGGCATGATCGAGAACCCTAGGCCAATTGACTTCATGATGGAGAGCAAGCTGGAGGGCATAATTGGGAGTGGTAGTTCTAGGAATTTTGATTTTTTTGGAAACAGTGACATGGGCATGGGTGCTGGGCTGGGAGATATGCATGGTAATGCTCAAAATGGGTTGCCACCAAATTTTCACGGTCTTTGCCCCTCAGCTTTTGGTGGCATGTCTATGTCTCTTGATGGCAACAACACTGGCAATGGTGCTAATAACTACTTAATGGACTCTTGCCAACGCTTGATGCTGCCATACGATGCCAATGAGGACCATAATGCCTCAATCGATGTGAAGCCAAACCCTAAACAGCTATTGTCCCTCGAATGGCAAGACCAGGGTTGCTCTGATGCAGGCAAAGATTCCTTTGGGTATCTCAACGGTCCAGGATCATGGACTGGCATGATGAACGGCTATGGATCTTCCACCACAAACCCTTTGGTCTAA


Promoter Sequence:
>Vu_09020::LG2:13832592-13834592(+)
ATTACACCATTATTGTCTTTGTAATCATATACGCACACAAGTCTTTTCTTCACATGCCATACATCATGCTGCAAGTTAACAATACTATATATTTCTCATTTAGTCCAAAGATTGGCTAATCGCACATCATTAGGCCACACCTTTATGAAGCTTTGCAGTAACTGTATTTGTGATATTGAATTATCACTTAAATTAAATTGTTACTTTGTTGTTTGTTGAATTTATTATTATACTCATATGTTCTGAAATCATTTATTAGTGTATAGTTTCGTACTATATATATATATATATATATACTTTAAAGGATGCTGATATCTTATCTCTATTAAAGATAATTCATAATATTTATGAGTAAATTTTATAAAATGAAATCTGTTTCTTAAAATTAGGAAGTATTGGGGGTGTGGAAAACTATGTAGCAGCAGTATTATGATTGAAATGGAGTGCAGGTGAATTTAAAAGAATGATGTTACTGATCCGTATATACATAGGAGTTAGTGTTTTTGTTTTGTGGCTGTTGTGAGCTTTGAGCAACCAACGGGTATTGAGTGGAGTATTGTCTGATAGAGGCGAAGAAGGTAAGAACAAGTAACAAGTACCTAGAAGAAGTGAGTAGCAATGATAACACGGTTATGATTGAAACAATAATAATCCAGATCTTTAGATTAAAGCAGATAGAAAACGACCATCCAAGGGGAAAAGAAAGAGAAGAACGGAGGAATTGAAATGAAGGCAAGTAACATGGGAACACACACACTTTATTCACCTGACACTGCATGTACTTTAGTTCCTGTGGAGTGGGGTGTGTTCTTCACGCCAACCATCTTATTCATCTTCTACTTAGTGGATAAAGATAGCATCCTCGCTCCTCTTTTGGGTGTCACTCTTATGATCAAAGCTTTTCAGTTTATTCCCTACCACCCCACACACCAACCCCGCCTACTTCACCAATATCTCTTCAAACTTTCAAACAACAATTCATAATATACATACTTACATTTCAAACAAACCCAAAATTTATATTTTTTTTCAAACTTACATTTCAAACATACATAATTTAAATTTGAAGAGTCACATCCAAAGAAGAGCGACCACGTTATTTGTCTGAATTTCTTGTACAATGTAACATTCAACATTAAATTAGTTAAAATTCACTGAGATTAGACACCAATGACTTACAAATGTCAAAATCAATAATTAAAAACAAACTTTTTCAACGTCCAAGATGAAATTAATCTATCAAATGTATCAAATTTGAAACACTAAATTGATATATATATATATATATATATATATACACACACACACACACACACATATGGTTCTGATAATCAAATCAACGTTTTCCTCTTGGGGGGGAGATAGAAGAAACACTTAACAGCAATGGCGCGTGTGGGAAATGAGAATATATCCCTTGCTTGTGGGAGGAGGTGGAGTGGGTCCAAAATGGTGTTTGTGTTGTGTGTGTGGGGCTTGCAACGTAGAGTGCTCTTTCGGTATGCGTTCTTTATCGGGGACCCAAATATTCTCAAGCTTCTGTCACGTCAGACACGACTAGCGTGACGTACCCATTCTCTACACATACCCATCTACGCTCATCCTTTCTCCACGTCACCACCTGATCCAAATCTCACCGTCCGTTGTGTCAGTGAAGATTTAGTCAAGTTGAGATAAGCTATTGGCATTAGAGAGACAGGTTAAGGCCCACCATTGTTGTCACCGACGGGTTTTACACACTGTAGCTCTGCGACAACATGCCACCTCTCACTCACTACCCTCAACTTTTTCTTCCTTCTTATTCACTGTCCCGTCCCATGTAGCAACCACACCTTCACACACACATGCTTTCCTACAATACAATTCCCTCTCTTCGATTCCCACTTCACATATTATTCCTCTTCCCACCTTCTCTCCTTCATCATCTTCTGCAATGCCTTTCACAAACTTCAAGTAGCACTCCCACAGTTCAGTTCTGTTAACATCATCGTGTGTGCAGTGAA


Gene Sequence:
>Vu_09020(+)
ATGGGGTTATCTTCTTTGCACGTCTGCATGGATTCGTCAGATCATTGGTTGCAGGTATACTATATAACCACACACATGCACACACAACTTGGGAATGTATATGTTTTTATCACTCTCATTAATCCAGTCTCTGGTGTAAACAGCAGTTTCGGGGAGTTTTTGTTCAAGGGTTTTAGTTAATTAACGTTGGTTTGCAAGTCAGTAACAATGTGTTGCACCCTCTGAAACCTTTTTGTTTTGCAATGTGAGAGTTGGTTGGACCAAATTAAAGGAGAAAAAAAAAAGACGAGAAAGCCAAGAAAAAGAAAACTAGGAAGAGAACAAAAAGAATGGAAAGAAAAAGACATTTAAAATCCAACAAGACAAATTTTTACAGTATACGTCTAACACTAACATCGCAGTTTTGATTTATTTGAGTTAAATATTAAATATTTTGCTTTACGGAAAATGTCAGGGCACAATTCACGAGGAGTCTGGAATGGATTCTTCTTCTTCACCCTCTGGGGACATGCTTACATGCTCAAGGCCCATGATAGAGAGGAGGCTAAGACCCCCACATGACCAAGCTCTAAAGTGCCCCAGGTGTGACTCAACCCACACCAAGTTCTGCTACTACAACAACTACAGTCTCTCTCAGCCAAGGTACTTCTGCAAGACCTGCAGAAGGTACTGGACCAAAGGAGGCACTCTTAGGAACATTCCTGTTGGTGGAGGCTGCAGAAAGAACAAGAAAGTCTCTGCAAAAAAATCCAATGACCACCCATTAGTTAACAATCAAATTAGTCAAACACAGCCCCCACCCTCCTCCTACCATCACAACCCCAAAGACCTTCAACTCTCTTTTCCAGATGTACAATTTTCCCACCTCAGCAACTTGCTTGGGACGAATGCAGGGTCACTGGGAAACCCTAGCTTTATGGAGGGTAAGTATGGTATTGGCATGATCGAGAACCCTAGGCCAATTGACTTCATGATGGAGAGCAAGCTGGAGGGCATAATTGGGAGTGGTAGTTCTAGGAATTTTGATTTTTTTGGAAACAGTGACATGGGCATGGGTGCTGGGCTGGGAGATATGCATGGTAATGCTCAAAATGGGTTGCCACCAAATTTTCACGGTCTTTGCCCCTCAGCTTTTGGTGGCATGTCTATGTCTCTTGATGGCAACAACACTGGCAATGGTGCTAATAACTACTTAATGGACTCTTGCCAACGCTTGATGCTGCCATACGATGCCAATGAGGACCATAATGCCTCAATCGATGTGAAGCCAAACCCTAAACAGCTATTGTCCCTCGAATGGCAAGACCAGGGTTGCTCTGATGCAGGCAAAGATTCCTTTGGGTATCTCAACGGTCCAGGATCATGGACTGGCATGATGAACGGCTATGGATCTTCCACCACAAACCCTTTGGTCTAA