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Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

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Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_08887 LG2 12040220 12042132 PREDICTED: transcription factor MYB34
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Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, response to insect, response to insect
Cellular Component   located in   plasmodesma, nucleus
Molecular Function   enables   transcription cis-regulatory region binding, DNA-binding transcription factor activity, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
No SNPs found.

Sequence Details:

Protein Sequence:
>Vu_08887.1
MGRTPCCSHEQLRKGAWTVQEDQKLIAYIQKHGTGSWRTLPQKAGLQRCGKSCRLRWFNYLRPDIKRGKLSPEEEQKIIKLQAVLGNRWSSIAKHLPMRTDNEIKNYWNSYLKRHYEKNDAYPSSSKPISTASSTESKSSDLCMVPSKETDCHGPNATPHQSNQSKLPKTMSSSTQLLNRVASKILSSGYLEAIKSYQHVVAGKSNGDNSVVKTGIEVEKEGNRDPLVPNLTSSNHSVTCSAQLLNKMATSLPHKVHGLESAKAVFSKLLESSEKGDSGSDGSFISSDQIGECLNALSPFEDGPHITNVVGSPSSPSLIFNQVTTPSCFSDNEDNWQNVSSNYVSFRHCAPTAAECSVSELNLGESSSSTSCFLFENTDLGICDDEISKYIQYL*


CDS Sequence:
>Vu_08887.1
ATGGGAAGAACTCCTTGCTGCAGTCACGAGCAACTCAGAAAAGGTGCCTGGACTGTTCAAGAAGACCAGAAACTCATTGCTTACATTCAGAAACATGGCACTGGAAGCTGGCGTACCCTTCCTCAGAAAGCTGGTCTTCAGAGATGTGGAAAGAGTTGCAGGCTGAGATGGTTTAACTACCTCAGACCAGACATTAAGAGAGGAAAATTGAGTCCGGAAGAAGAGCAGAAGATTATAAAACTTCAGGCTGTTCTTGGCAACAGGTGGTCAAGCATTGCAAAGCATTTACCAATGCGAACTGATAACGAAATAAAAAACTATTGGAACTCGTATCTGAAAAGGCACTATGAAAAGAATGATGCGTATCCATCGAGTTCAAAACCAATTAGCACTGCTAGTTCCACAGAATCAAAATCCAGTGACTTGTGCATGGTTCCATCAAAGGAAACTGATTGCCATGGCCCAAATGCCACTCCACACCAATCTAATCAGTCCAAATTACCAAAGACAATGTCATCCTCAACTCAGCTTCTCAACAGAGTTGCTAGTAAAATTCTTTCATCTGGGTACCTAGAAGCAATAAAATCATATCAACATGTTGTTGCTGGGAAAAGCAACGGTGATAATAGTGTGGTTAAAACCGGAATTGAAGTAGAAAAGGAGGGTAACAGAGACCCCCTTGTGCCTAATTTGACCTCATCAAATCATTCAGTAACTTGTTCTGCTCAGCTACTGAACAAGATGGCTACTTCACTCCCTCATAAAGTTCACGGTCTTGAATCTGCAAAAGCTGTTTTTTCAAAATTACTGGAAAGCAGTGAAAAAGGAGACAGTGGTAGTGATGGTAGCTTTATTAGCAGTGATCAAATTGGAGAGTGTTTGAATGCTCTAAGCCCTTTTGAGGATGGACCGCACATAACGAACGTGGTTGGGTCCCCTTCTAGTCCTTCCCTCATATTCAATCAGGTGACCACACCCTCATGCTTTTCAGACAATGAAGATAATTGGCAAAACGTTTCATCTAACTACGTTTCATTCAGACATTGTGCTCCAACTGCTGCTGAATGCAGTGTTTCTGAACTCAACTTGGGTGAGTCTTCTAGTTCAACGTCATGTTTCCTGTTTGAAAATACTGATCTCGGAATCTGTGACGATGAAATAAGCAAGTACATTCAGTATTTGTAA


Promoter Sequence:
>Vu_08887::LG2:12038220-12040220(+)
ACTGGTGTACTAAGTTTGTGCGTGTGAAACGGTTTCATAAAAAAAAAGGTTTAATCCTTTACTACATCCCTAATTTATGTACGAATTTTTCAATTGGGTCCTCGTTTTTTAAAGTGTATCAAAATGGTCCTTAATTTTGAAAATTAATATCAATTGAGTCCTTTCCGTTAAGTTGGCTGGACGGCGTTAAAAAAATTGATGAGTGGATGCTGAGATGACGAACGAACGCTCGTCCACCAGCGAACGAATGCTCGTCCACCAGCTAACGAACGCTCGTCGACCACCGAACGAACGCTCGTCGACCACCGAACGAACGGTCGTCCAGTGTGGAACGAACGGTCGTCCAGCAGTAAGAGGTCGACGAGCGTTCGTTCACTGGTGGACGAGCGTTCGTTCGCTGGTGGACGAGCGTTCGTTCGCTGGTGGACGAGCGTTCGTTCGCTGGTGGACGAGCGTTCGTTCGTCATCACAGCATCCACTCATCAATTTTTTTAACGCCGTCCAGCCAACTTAACGGAAAGGACTCAATTGATATCAATTTTCAAAATTAAGGACCATTTTGATACACTTTAAAAAACGAGGACCCAATTGAGAAATTCGTACATAAATAGGGATGTAGTAAAGGATTAAACCAAAAAAAAAAACCTTTAACCCCAACTTCATAAAAAAAAAAAAAAAAGTAAAATCGTGCTTTTAACTTTAGCAGCATGATTCCTTCGGTTTGAAATTATGTTCCAAGCTCGATTTAACAGTTCTTGTAAATTTTTCAAAATTTTCTCCATTCAGTAAAAAGCTCACCTAAAATTATACCATTACGGTAAAAAGGACCAAACCACTCTCTCCCTCCCTTCCTAAATTCTTCATCTTTAAGGTTATTACGTAATCTATACCAAGATTTAATATCACAGTACATTTGGTCTAAAGTACTCTCATTTACTTTCTGCCACTTTAATTACGCTGTTGTATTCATGCATAATAAAAACAAAATTAAATATTTTTTTAATCTCTTATTTTTAACATAAAATTAGAGGTTATAATTTGTTTTATTCAAAATTTTAATATATTTTTGTCTTTAATTACACTTAAAAATAAATAAAAATATTTTTTTAATCAAATTATATTAAATTTTTTAGACTTATCATCTATGTTTTTTAATTGATATTAAAGTAAGAATATGTCAAATAATATAAATAATTTAGATATTAACTATTTAACACATAAAAAATAATATAATTAATTTAAAAAATATTATTTATTTGCTTTTAAAATTTAAAAATTAAAATATATTAAAATTTCATACATAAACGAATTTCAATATTAAGTTAAAGTTAAAGATATCACTTCAAATCACGTATTTACCAAAAAAAAGAATTAGTAAAAGTTGGAACTCTATACATATAAAGAGTTTGGAAACAAAATGCGATGGTTTTAAAATGTCTCAGTCAAGCAGCTCTGTCATATATGACAATTTATTGTGTACAACTACTCTGGTCCCTAGCCATTGAGCATAGATGTATGCATGTGTGCGTATGAGACAATAACATATAATTGGTGTTGTGTTGGTTATGGCTATGGTTATTGTCTAAATTTGTGAGCGACGGACTAAACGGTCTCCTCCATGCAGCGCGAGGTTAGCGAGGTGAAACTCTGAGGGCCATCCATTGCAAGCAACAATTCATCCTCCATTTGTCACATTGTCAATAATCGTATCTCCATAAGTCCAGCAGTGTTTTGTCCCCACATGCCATCAATGTTCAAAGTGGTCGTACTACTCTGAGAGGCTTATATTGAACACATGCAGCAGCTACAGCCACACTTTCAATGCCCTCATTAATTTGTCCATCTAGTACACATACATAACATACATACATAGTCACACCCCTTTCTCACCTAGACACACACTTACACTGCACTTTTTCACCATTCTTTTTCTAACTCCTCAATCTCCTTCCACTGCCACTCATACATGGCTTCCTTCACCACCTCCTGATGCTGTAAAA


Gene Sequence:
>Vu_08887(+)
ATGGGAAGAACTCCTTGCTGCAGTCACGAGCAACTCAGAAAAGGTGCCTGGACTGTTCAAGAAGACCAGAAACTCATTGCTTACATTCAGAAACATGGCACTGGAAGCTGGCGTACCCTTCCTCAGAAAGCTGGTCAGTTTTTCCTTTTTTTCTTTTTTCAAATTTTAACCTTCTTACTCTTCACTGCTTCACCATCACTACTCAGTGTTATGTTGTTGCTGTTGATTTAGACATGTATTTGGGTAAATAGCTTGCACTTAGTCAGGGTTAACATTGCCTCTGATTTGTTGGAAACTTATCATCAATACGATGTGTATATGATTAAATATAATTTGTGAGTGTGTTCAAATCTCACATTTCAAGTTGGTTTCTGAGATTGAGTTGAAGTTGAAATTCATCTTTTTAAGATGGTTGGAGCAGGTTAGAAACAGAGTTGTTTAGAATTAGTTTGGCTAGCATCGTTCAGTAGTTTTGGTCTTGGAGATCATCGTTCAGTAGAGTGAGGGCAACTTTTTTGAGTATTTCTTGTGTACTACAGGTCTTCAGAGATGTGGAAAGAGTTGCAGGCTGAGATGGTTTAACTACCTCAGACCAGACATTAAGAGAGGAAAATTGAGTCCGGAAGAAGAGCAGAAGATTATAAAACTTCAGGCTGTTCTTGGCAACAGGTGAAAGATCTAACTGCTATCAGTTCTGAATGTTTTTGGTTAGATGCCCTGCTGCAGAATATTTTCATTTATGCAGCTATGCAGCTTAACTAAGATACTGGTTTAGTTTAGATACATATCATTTGAATAAATGTTTCCATAAGTAGGATATAAAGAAAACAAAGACTTTTTGGATAAAATATTGTAAGTTAGAAAGCAGTTTTAATGAAACTGAATTGTAATTGGTAAAGCAACTTATTTTATATGTAGGACCTTACTGAGTGGAAATGGTGGATAACTTTTTAATACATTGTATCGCTTTCGTGTTTTTGGTTCCTGCTAGGTGGTCAAGCATTGCAAAGCATTTACCAATGCGAACTGATAACGAAATAAAAAACTATTGGAACTCGTATCTGAAAAGGCACTATGAAAAGAATGATGCGTATCCATCGAGTTCAAAACCAATTAGCACTGCTAGTTCCACAGAATCAAAATCCAGTGACTTGTGCATGGTTCCATCAAAGGAAACTGATTGCCATGGCCCAAATGCCACTCCACACCAATCTAATCAGTCCAAATTACCAAAGACAATGTCATCCTCAACTCAGCTTCTCAACAGAGTTGCTAGTAAAATTCTTTCATCTGGGTACCTAGAAGCAATAAAATCATATCAACATGTTGTTGCTGGGAAAAGCAACGGTGATAATAGTGTGGTTAAAACCGGAATTGAAGTAGAAAAGGAGGGTAACAGAGACCCCCTTGTGCCTAATTTGACCTCATCAAATCATTCAGTAACTTGTTCTGCTCAGCTACTGAACAAGATGGCTACTTCACTCCCTCATAAAGTTCACGGTCTTGAATCTGCAAAAGCTGTTTTTTCAAAATTACTGGAAAGCAGTGAAAAAGGAGACAGTGGTAGTGATGGTAGCTTTATTAGCAGTGATCAAATTGGAGAGTGTTTGAATGCTCTAAGCCCTTTTGAGGATGGACCGCACATAACGAACGTGGTTGGGTCCCCTTCTAGTCCTTCCCTCATATTCAATCAGGTGACCACACCCTCATGCTTTTCAGACAATGAAGATAATTGGCAAAACGTTTCATCTAACTACGTTTCATTCAGACATTGTGCTCCAACTGCTGCTGAATGCAGTGTTTCTGAACTCAACTTGGGTGAGTCTTCTAGTTCAACGTCATGTTTCCTGTTTGAAAATACTGATCTCGGAATCTGTGACGATGAAATAAGCAAGTACATTCAGTATTTGTAA

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