Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_08655 LG2 8817332 8821112 PREDICTED: transcription factor bHLH66-like
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/C 8817374 5_prime_UTR_variant
C/A 8817514 missense_variant p.Leu14Ile
A/C 8817606 synonymous_variant p.Ser44Ser
A/C 8817623 missense_variant p.His50Pro
A/T 8817833 missense_variant p.Tyr120Phe
C/T 8818109 splice_region_variant&intron_variant
C/T 8818218 splice_region_variant&intron_variant
T/A 8818229 intron_variant
T/G 8818397 synonymous_variant p.Ala247Ala
A/T 8818602 intron_variant
A/G 8818624 intron_variant
T/C 8818631 intron_variant
T/C 8818662 intron_variant
T/C 8818674 intron_variant
G/T 8818747 intron_variant
G/T 8818779 intron_variant
T/C 8818785 intron_variant
A/G 8818856 synonymous_variant p.Arg279Arg
G/A 8818945 intron_variant
T/A 8818947 intron_variant
C/A 8818982 intron_variant
T/C 8819801 synonymous_variant p.Ala332Ala
C/A 8820202 intron_variant
C/T 8820337 synonymous_variant p.Arg351Arg
G/C 8820352 synonymous_variant p.Ala356Ala
G/T 8820448 missense_variant p.Glu388Asp
C/T 8820616 synonymous_variant p.Val444Val
C/T 8820652 synonymous_variant p.Ser456Ser
T/C 8821046 3_prime_UTR_variant
A/G 8821072 3_prime_UTR_variant
C/T 8821104 3_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_08655.1
MQPCSREMQGINSLFNSSSQISLQDLHTTTTTTTTTATNQIQNSHINHHHHQPLQHHHQLPHFDPTSQDDFLDQMFSSCSWPDLNPNKSLWDPNTLSDQTTPSDNDNTNNTDHNNVAFPYDEPSTLASKFRNHQISASSTKNAAAALMLQHQLLMSRDSPLLHMPLSLPQNDVVDASSFKSPNPGGETSVQALYNGFAGSLHGAGQASNQTQHFQHPQGSSNPMQGQNFGAPVTGGATNQAPASGAAAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADMSSEGGGDCIQANGNANRGGSLAPNSNSNNNQTTASTSNDSLTMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHTRNPLINAASGSTQIPTNAAPGTLVNPAVASNGEGPSSPSMSVLTVQSAVVGNEGAVKDAASVSKP*


CDS Sequence:
>Vu_08655.1
ATGCAGCCCTGTAGCAGAGAAATGCAAGGGATAAACTCCCTCTTCAACTCTTCTTCCCAAATCTCCCTCCAGGACCTCCACACCACCACCACCACCACCACCACCACCGCCACCAACCAGATCCAAAATTCACACATCAACCACCACCACCACCAACCACTCCAACACCATCACCAACTCCCTCACTTCGACCCAACCTCTCAGGATGACTTTCTCGACCAAATGTTCTCCTCCTGCTCCTGGCCCGACCTCAACCCAAACAAGTCCTTGTGGGACCCCAATACCCTCTCCGACCAAACCACTCCCTCCGACAACGACAATACCAATAATACTGACCATAATAATGTCGCTTTCCCCTACGACGAACCCTCCACCTTGGCCTCCAAGTTCCGCAACCACCAGATCAGCGCTTCCTCTACAAAAAACGCCGCCGCAGCTCTCATGCTCCAGCATCAACTCCTCATGTCCAGAGACTCTCCGCTCCTTCACATGCCGCTTTCCTTACCTCAAAACGACGTCGTTGACGCCTCCTCCTTCAAATCCCCCAATCCCGGCGGCGAGACTTCGGTCCAGGCTCTCTACAACGGCTTTGCCGGATCTCTGCATGGCGCCGGTCAAGCCTCCAACCAGACTCAGCATTTTCAACATCCTCAGGGAAGTTCTAATCCGATGCAAGGGCAAAATTTTGGTGCGCCGGTTACTGGGGGCGCAACGAACCAAGCTCCGGCGAGTGGCGCAGCTGCTCAGCCGAGGCAGAGGGTTCGTGCCAGGAGAGGTCAAGCCACGGACCCTCACAGCATCGCTGAAAGGTTGAGAAGGGAGAGAATCGCAGAGAGAATGAAAGCCCTACAGGAACTGGTTCCCAATGCCAACAAGACAGACAAGGCATCCATGCTAGATGAGATCATCGATTACGTGAAGTTCCTGCAGCTCCAAGTCAAGGTTCTGAGCATGAGCAGATTGGGCGGTGCAGCTGCTGTCGCACCCCTTGTTGCTGATATGTCTTCTGAGGGTGGCGGTGACTGCATCCAAGCGAACGGCAACGCTAACCGCGGCGGTTCCCTCGCGCCAAATTCCAACAGCAACAACAACCAAACCACAGCGTCAACCTCGAACGACAGCTTGACCATGACGGAGCACCAGGTAGCGAAACTGATGGAGGAGGACATGGGTTCCGCCATGCAGTACCTTCAAGGCAAGGGCCTTTGCCTCATGCCCATTTCTCTTGCCACTGCCATCTCCACTGCCACGTGTCACACCAGGAACCCCTTGATCAACGCTGCCTCCGGTAGCACCCAGATTCCGACCAACGCCGCCCCCGGCACTCTCGTCAACCCCGCCGTGGCGTCCAACGGCGAAGGCCCGTCCTCTCCGAGCATGTCCGTGCTGACGGTGCAGTCGGCCGTGGTGGGCAACGAGGGCGCCGTGAAGGACGCTGCCTCCGTTTCGAAGCCGTGA


Promoter Sequence:
>Vu_08655::LG2:8815332-8817332(+)
AATATATGTATTGTCGTAAATATTTATATTTTAATATATGTTAATAATATTTGTAAATTGATTAAGTAATATGTAAACTAAATTTATATTTATTAATAAAGTTAAATATATATTTATAAATGTGATGAAAAAAGAAAAAAAAAACAGTTTTATTCAACCAATTTCGAAATAACAGTTATTCTTGAAAATACGGTTAATAATTATATTATAAAGGATAAAATATAAATATAAAATATGTACGTGAAAGAGAATTTTTTTTTTATATATGAATATAAATGACACAATTGAAAAATAATCCGTCATTAGTTCAAATTGACTTGATTACGAAAAATAACTTGACGTAAATATGAGCAACAAATGCCACTTGATATTGAAATAACGTTGTCATAATGAATTTGTCGAAATGAATTATGTCAGCTTATTTTAAAGAAAAATATAATAAAATTAAAAGTATTTAAAATAGTTAAACAAAATTAAAAGAATTATATTAAACTTTTAAGTCTAACCATGTCTACCATAAGATTGTGTTGTATATAATGTCATTTGTTATTAAACACTCGTCTATTCCTAAATTCAATATGTTCAATATTTAATATTAAGTATGTTAAAGATAATCAACAAAAAATATAATAAAATTATAATATACAGAAATATACAAATCTTTTCTTTCAAATCAATTTTTAATTTTAAAGGTACTTTTTAACACAAAATTTAAAATTATAGTATAAACTCTGCTTTATAAACCACTTTTGCAAAAGTCAAGCTTATATAATACTTTATAAAAAGAAGACGTCTAACTTTTTATTTACTTTTTAGTTTTTCAAATGAAGAAACTAATTTGTTTTCTACTTGTGTTAATCCACCTAAATACCATATTTGATCCAATATGGAACACTCTGATTGAAAATGATTTACACCCTATGCTTTTAGTGTAAATTATAGGCAACAAAATACGAAGCAAATAGGTAACTTTAATTATATTATAAACTTTTAACATATTGGTTTTTCATTTTCTAAAACACTACTCTTTTATTTATTATATATATATTATTTGTTTGTTTTTCTTAAAGCTATAAGCCTTCAGTTTGTATTGTTGTGTACGAACAAATGTTTAAATTGTTATCATCTATTCTCACTTCCAAGTACTTCACATAATATCCCTAATTTAATGATCACCTTTGAAGGATTATACGTTTCGAAATTCAATAATTAAATTTTGTACACTGTTATTTTTAAAAAATGTTTTTGAATTAAGAAAAGACAGTGTAAGTAAACTATTCTTAAGTGAAGAAGTAAACTCTTTCAACACGAGAATAAGTCTCTGTTAAGAAAAAAATAGAAATTACAGAAAAATTTCTTTTTTATTCCCAAATATAATCACAAAGTATATTAACGTAATACACTAGGGTCAAACTCTATAGATGGTTGGCTTTAAAATTTTGTACTTAAAAAGCATTTTCTTAATAGATTAATTGAAAGAAAAGTGCTTATAAACTCCAGTAACTATTAGGTTGTATAATTGCTAGCTGTATTGAGTAGATTTGAAGAGGAATCTTGACTTTGTAGTAGAATCTTTTATTATAATTTTTCTAGTTGAAGTTGATAGTATATCGATTGTAATCATTATTTTTATTTTTATTCCATGACATTGTAAATGGATTAGTACCTTTATATTACACACACAAATGTATATATATAACTACTACCTTGAACTTTGAAGAGATTTAGAACTTTTGAGATACTCGAATAAACCCGGCAGAATCGAAAACTAGAAAGGTAGAAGTGATATTTATTTATTTATTTTTTGAACTAAACAGCATATCGACGTGGTGTTTGAGGTGAAGAAGTTAGTTACTAATAATTTGGATAAAGAAAAAACGAAGTGAGAGAATAAATAAAGAAATAAAAGCCTTAATTTGGTTTGATTAGTTAATTAATTAATTTGTTAGGAGACGGCTCTTCTTCTCCTATTTAAAAAAATGGAGTGGAAAGTAAAGAGA


Gene Sequence:
>Vu_08655(+)
AAAGATGGATAGACAGTAGACAGAAACGTAACTGGCTTCCGATTCTGAAGGGCGAAACCGAAAACCCCGCAAACACAATGTTCTTTCCATTCCCACTCTATCTCTCACATTAAACCATTCTATCATCACACTCTCTGGTAACTATGCAGCCCTGTAGCAGAGAAATGCAAGGGATAAACTCCCTCTTCAACTCTTCTTCCCAAATCTCCCTCCAGGACCTCCACACCACCACCACCACCACCACCACCACCGCCACCAACCAGATCCAAAATTCACACATCAACCACCACCACCACCAACCACTCCAACACCATCACCAACTCCCTCACTTCGACCCAACCTCTCAGGATGACTTTCTCGACCAAATGTTCTCCTCCTGCTCCTGGCCCGACCTCAACCCAAACAAGTCCTTGTGGGACCCCAATACCCTCTCCGACCAAACCACTCCCTCCGACAACGACAATACCAATAATACTGACCATAATAATGTCGCTTTCCCCTACGACGAACCCTCCACCTTGGCCTCCAAGTTCCGCAACCACCAGATCAGCGCTTCCTCTACAAAAAACGCCGCCGCAGCTCTCATGCTCCAGCATCAACTCCTCATGTCCAGAGACTCTCCGCTCCTTCACATGCCGCTTTCCTTACCTCAAAACGACGTCGTTGACGCCTCCTCCTTCAAATCCCCCAATCCCGTACATCACTCTCACCGCTGCAACCGTAAACTTCCCGTTTCTTTCTTCTAAACTGCATTTATCCCTGATTTATTTTTATTTCCGTAGGGCGGCGAGACTTCGGTCCAGGCTCTCTACAACGGCTTTGCCGGATCTCTGCATGGCGCCGGTCAAGCCTCCAACCAGACTCAGCATTTTCAACATCCTCAGGTCTGCGTTTGTCTTTTTAATTTTAAACAAAAAATAATTACTATTGCGTGAATCGTTGACGGTATTTTTTTTTGTTTTTTATGTTTCAATTAAAGGGAAGTTCTAATCCGATGCAAGGGCAAAATTTTGGTGCGCCGGTTACTGGGGGCGCAACGAACCAAGCTCCGGCGAGTGGCGCAGCTGCTCAGCCGAGGCAGAGGGTTCGTGCCAGGAGAGGTCAAGCCACGGACCCTCACAGCATCGCTGAAAGGGTACTCACTGTTTTTGTTTCTGGCTTTAATTCTTGGCTTCATTAAATATCATGTTTAGGTAATGGAGCCCAATAGTTTCAGGTCGTCGCTTTAGGTAGACAATATCCTAATTCATTATTATTCAGTAGAACTGGTAGTGATAAGTGACAGACTGAATAATAAACTCAGTATTTTAATTCTTATACATCGAGCATGTCATGTTTACAATAATGATAAACTGCTACATAGTTAGGGTTTATAAACTATGAATTAAGTGAGGAAAATAAAGAAACAGAGAGATGTTTTTTCTGCTTGTTCCCGGGCAGTTAGTAAGGACATTAGCGTTTTGGTTACTGAGCTGGTTGGATACGTTGTTTGTGACAGTTGAGAAGGGAGAGAATCGCAGAGAGAATGAAAGCCCTACAGGAACTGGTTCCCAATGCCAACAAGGTAAATGCTCGTCCTTAGTTTTGTTTATTATAATATGGATCTAATTTCAGTTAATTAAAAGAAATTGAAACGGAAGCCACAGTAATCTGGCACGCGATGAGCAGTTTTTTGCAACACGGTAACTGTAGTTTTGCTGTGTAATGGGACAACTGGGTCATATCGATAGAATATATGAGTTGTTAGTTGTTTTGATGTTGCTGTCGTGTATATCGACGTTAATGTAACAAGGAAACTGGAAAGAAAAGAATGGATAGTAATGTCGCGCTCCGGAGGTGCTGTGAGCGTTTGTCTTGCCTGATCATCATACGATTCCGTGCGTACTTAACATACTAAGCTGGATAGCAGAGGGGTTAGGCCCCACATAGCTCACCGATCACTGCTCACGGTAGGGACCATGAAGTGTGGCTATTCTGACTTCTGAGTCATATAGAGGGGTAGTCCAGGCATAACATAACATATGAAAGAACAATGTTTGGTTTAATTATTATCATTATGCGAAACTGTTACTGTTATTATTGTGATTATTATATGGGAAAAATAAACTGGTCAATCCCTAATTGAAATATTTGTTTGGTTTGTGGAATGACAGACAGACAAGGCATCCATGCTAGATGAGATCATCGATTACGTGAAGTTCCTGCAGCTCCAAGTCAAGGTGCTCTTCCCGGGTTTTACTCTTGTGCTAATATTTCTTAATTTGATTTTATTCTTCATCAGCATCAAGTATTGGCATATTTTAATGATGGACTTCATTATTTAATTACAGGTTTTAAGTATGGTGTTATGGTTATTAAATTCCACTCTCCTGTGTCGTGAATAAATAAATAAATGGTGTCATTGTTTGGGTTACAGGTTCTGAGCATGAGCAGATTGGGCGGTGCAGCTGCTGTCGCACCCCTTGTTGCTGATATGTCTTCTGAGGTTATTACTTTTCCATTTTCATTGTCACAGCAGAGAACTTCAAATCTCATCACACTCTAATTTCTGAGAGAATTTCGAAATTATTTAGAAAATTGAACAAGTGTTAGGTGTCCGTAGTACCATAATAGATCAAACTGTGAGAGGATAAAATAGAAGGAAAACATGAGAGGGTTGCTATAAGAAGAAAAAATAAAAAATAGTAATGAAGAAAATGTGGAACAGACTGCGCACCATGAATGAAAATGTCGGAGAGAGGAGTCTTTCCCACAACCCCACCAACCCACCCAACATTTCACTTGGCTTTGGCTTATTTCAATACTCAAATTCTCAATCACCACAAAACGACAATCCAAAAGCAGCACGCGTATCCACTTTCTCAGATTCCCCTCTGTCTCTCTCTTTCACGCACGCGCACACGCGCCTTTCTATTTTCACTTTCCGTTAAAACCCCATGGTCACGTGACTGTTTGTGTTTGCAGGGTGGCGGTGACTGCATCCAAGCGAACGGCAACGCTAACCGCGGCGGTTCCCTCGCGCCAAATTCCAACAGCAACAACAACCAAACCACAGCGTCAACCTCGAACGACAGCTTGACCATGACGGAGCACCAGGTAGCGAAACTGATGGAGGAGGACATGGGTTCCGCCATGCAGTACCTTCAAGGCAAGGGCCTTTGCCTCATGCCCATTTCTCTTGCCACTGCCATCTCCACTGCCACGTGTCACACCAGGAACCCCTTGATCAACGCTGCCTCCGGTAGCACCCAGATTCCGACCAACGCCGCCCCCGGCACTCTCGTCAACCCCGCCGTGGCGTCCAACGGCGAAGGCCCGTCCTCTCCGAGCATGTCCGTGCTGACGGTGCAGTCGGCCGTGGTGGGCAACGAGGGCGCCGTGAAGGACGCTGCCTCCGTTTCGAAGCCGTGATGACGGCGTTTGGGTGACTTTGGTGTGAAATAGAAAAGAACATAAAGTGCCAAAGGACAGAAAATGACGTGTGTTTTTCTATGAAGAGCCGTTAAAGTCTACGAAAATAAGGCGTCAGGGATACGGAGGGGTCGACTCGACGACGCCGTATTTACCTAGACTTTGTTTGGCTGAGGCTAACTTTCAACCTCCGTCTTCTTTTTCTTTATTATTATCTGTCGCTTTGGCTTTCTTTTGTTCATTGTTTTTAAATTATTAGTGTACTTCCTTCTCTTTTTCCTTTTCGCATTTCCGTCTAAATAATAAGTTGCTCTGCCTTTTCATTTTTTAATGCGTTCCAATTAATTATAGCTTTTTATTACGAAGCCTT