Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_08455 LG2 6350811 6351830 PREDICTED: ethylene-responsive transcription factor ERF017
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   jasmonic acid mediated signaling pathway, response to water deprivation, small molecule metabolic process, response to chitin, response to wounding, jasmonic acid mediated signaling pathway, jasmonic acid mediated signaling pathway, response to cold, jasmonic acid mediated signaling pathway, defense response to bacterium, regulation of transcription, DNA-templated, regulation of defense response, regulation of transcription, DNA-templated, defense response to bacterium, response to water deprivation, regulation of transcription, DNA-templated, defense response to fungus, defense response to bacterium, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, response to cold, response to water deprivation, regulation of transcription, DNA-templated, defense response to fungus, defense response to fungus
Cellular Component   located in   nucleus
Molecular Function   enables   transcription cis-regulatory region binding, DNA-binding transcription factor activity, transcription cis-regulatory region binding
SNP Position Effect Amino acid change
A/G 6350936 3_prime_UTR_variant
C/T 6350982 3_prime_UTR_variant
C/G 6351164 synonymous_variant p.Arg178Arg
A/G 6351413 synonymous_variant p.Ala95Ala
G/A 6351475 missense_variant p.Pro75Ser
C/A 6351699 5_prime_UTR_variant
T/A 6351702 5_prime_UTR_variant
A/G 6351725 5_prime_UTR_variant
T/G 6351753 5_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_08455.1
MVKPGSVEKTTEERTNTSYRGVRKRKWGKYVSEIRLPNSRQRIWLGSYDSAEKAARAFDAAMFCLRGSGAKFNFPNDPPNIAGGRTMTPPQIQIAAASFANSEPQKECSGQQHVESLASDEETASFRLESSSPPLSDVSVQNDPIFQNGSFRDPFSDLGSGSFAPEFSDFPSFDDFSRDFFLPGLPSFDDGEENVDGMIVQDPFLWNF*


CDS Sequence:
>Vu_08455.1
ATGGTGAAGCCTGGTAGCGTGGAAAAAACTACTGAGGAGCGAACCAATACGTCGTACAGGGGAGTACGGAAGAGGAAGTGGGGCAAGTACGTGTCGGAAATTAGGCTTCCCAACAGTCGCCAAAGGATTTGGTTGGGTTCCTACGACAGCGCCGAGAAGGCGGCGCGCGCTTTCGACGCGGCCATGTTCTGCTTACGTGGCAGCGGCGCCAAATTTAACTTCCCGAATGACCCGCCCAACATCGCCGGGGGGAGGACCATGACCCCCCCTCAGATTCAGATAGCTGCGGCTAGTTTCGCCAATTCGGAGCCCCAAAAAGAGTGTTCCGGTCAGCAACACGTGGAGTCTTTAGCTTCGGACGAGGAAACGGCGTCGTTCAGGTTGGAGTCGTCGTCTCCTCCTCTCTCCGACGTGTCGGTTCAGAACGACCCCATATTCCAAAACGGGTCATTTCGCGACCCGTTTTCGGATCTCGGTTCGGGCAGTTTCGCCCCCGAGTTCTCCGATTTTCCGAGTTTCGACGATTTCAGCCGGGATTTCTTCTTGCCGGGGCTTCCTAGTTTCGATGACGGAGAAGAGAACGTGGACGGGATGATAGTCCAGGACCCGTTCTTGTGGAACTTCTAA


Promoter Sequence:
>Vu_08455::LG2:6351830-6353830(-)
CTCGGAATTTTGGTTTTAGTCCTCATTTTGTTGCTAAATGAGGATCAAATTTCTAAACGGTGTTAGTTTTCGAGGACTAAAACGAACGTTTTTGAAAAGAATGAGGACCAAATTGTACCTTACTTTGAAAGAGGGATGAAAATAAAAAACGATCAATAATTTAGGGACTAAAAACATATTTAACCCATTCTTTTTTATCAGTTATTGCAATTTATCCTTAAAGTCAATTCATTCTCTCTCTTCGTAGGTGTCATATCCTTATAATAATAAATAGCATGCACACTATACATGAAGACACAAAATAATGTATATGGTTAAGTGTGCCTATAATGATAACGATACGTACATTTCGAAAAAAATAAAATAAGAATATGAAAAAGGAAAAAGAAAGGGTAGCCCTAGTTGACACGACAATGAAAAGTCATAATTTTGACCTGGGTCAAGGATTATCATGGACATACAATGAACAAGTTTTTCAGGAAAAAAAATAGAAGATAAAAATTATAAAAAAGTAGTAACTTTTGGTTAATTTAAATAATTAATATATAAAAAATTAAACAAAATTTGTAAATTAATTTTTCAAGAGTTAATTTTATACTTAATTTTTTTTTGGAAAGGAACTCGTGTGGAGATCTTGCGTATTTAATGTGCATTTTGTCTGCATTTAGTTAACAGCGACCACTCCAAACGCGTGGCAATGAAAGGAGTAATCGTTGTTTGATTGAAGTTTACTCCTGTACTGATGTAAGGGATGATGCTGTAATATAACAAAAATAATATATTGTTTTTATTATCAAAACTATTTTCCTCAACATATTATTATATGTCGCATATCTTATGAAGGTGTAAATATATGACTTAACGAATCAAATGAATCTAAGCATAATTAATAAAATCAAGGAAATATAACACTCATATAAATATATTAGCCAGTAAGTTTAATGTTATAAAATATAACACTCATATAAATATTAGCACTCATGTAAACCAACACTCATATATGCATAAATATAAATATTTTAGTGTTATAAATATTAGCCTCTTAAACTTATATTACATCGTGAGACACTAAGTTTGACTTACATAATATATACAAAATTATTCTTTCGAAATATAAATAATAAAAATTACATTAAAAATAAGAAGGTGACGATTAATCTAATTATATTCTAGTATATAAACATAGACTCGAAGGTAGTTTAGAGATATTATAAAACTAACTCAAAAGGAAAAAAAAATAAGTTCTTCATATTATCTTAAAAAACAGGTAATTTTGATACAACATAATCCACTTGAAGTTTATTTGATCTCCACGGTTGACTTGTTGATTATCTATTAAGGAATAACACTATCTGTTTACCATATTATATATATATATATATATATATATATATATATATATATATATATTAATTTCTTAATCCTTATTATGTGTGTTTTTTCACGTTCCATTACAACCTTAGTCAAGTATTATTATTTTTTTCATGGTTTCACTGTTAATTTTGACTTGTTAAAAAGCAAAGTAATTGGAAGTTTCCCTCGTACAATGATTTGGAGGTGGGACTTGGGGGAGTGGTATTCACTAGTTTCTATTCACCACCACATTTTTCAGTTGAAAATTTAGAACTTCAACATCCCAATCTAAACAGAGTATTATTAAATTCATGGTGCTGCTAATCTACCTGCAAATGTGTAGTTCATTAAGCTAATGAAGTGAGATTATGGTACGGTACCCACTATTACACAAGACACAGACACTATGGTTCTAAATTCACGTGGAACAAAAAACGAACGTGGTGGTGGTCCACGATTGTTTCCTCCAGGGACTGTCTCGACGCGTAGATGCAAACCATCACTGCTCTCGTCACAAATGTCCATGTGTACAACAGCATGCACTTTCTAAGCCCCACACGCGCCTTTGAAGTCTTACATCACAGTGAGTCAAACATCTTCACTCGCTTCTGCACATATATAAAGAGCCGCAAACAAACTCCACCCTC


Gene Sequence:
>Vu_08455(-)
AGAAAACGCATACGACACAGATTCTCAGCACAAGCCAAAGACAAAGCTTCCATTTCTAAAATCGCAAAAAAAAAAAAAAGAATCATCAGAGTAAAACATATTTGGTTACTTATTTAAAGAGTGACTGTAAGGAATGGTGAAGCCTGGTAGCGTGGAAAAAACTACTGAGGAGCGAACCAATACGTCGTACAGGGGAGTACGGAAGAGGAAGTGGGGCAAGTACGTGTCGGAAATTAGGCTTCCCAACAGTCGCCAAAGGATTTGGTTGGGTTCCTACGACAGCGCCGAGAAGGCGGCGCGCGCTTTCGACGCGGCCATGTTCTGCTTACGTGGCAGCGGCGCCAAATTTAACTTCCCGAATGACCCGCCCAACATCGCCGGGGGGAGGACCATGACCCCCCCTCAGATTCAGATAGCTGCGGCTAGTTTCGCCAATTCGGAGCCCCAAAAAGAGTGTTCCGGTCAGCAACACGTGGAGTCTTTAGCTTCGGACGAGGAAACGGCGTCGTTCAGGTTGGAGTCGTCGTCTCCTCCTCTCTCCGACGTGTCGGTTCAGAACGACCCCATATTCCAAAACGGGTCATTTCGCGACCCGTTTTCGGATCTCGGTTCGGGCAGTTTCGCCCCCGAGTTCTCCGATTTTCCGAGTTTCGACGATTTCAGCCGGGATTTCTTCTTGCCGGGGCTTCCTAGTTTCGATGACGGAGAAGAGAACGTGGACGGGATGATAGTCCAGGACCCGTTCTTGTGGAACTTCTAAGAGGGTCAGGGTTTGGATAATTTTATTATATCCAATTCCGGGACCAGAATCGGGTTTGGGTTGGTCAATTTTTGTTAGGCCAAGCCCTGTGTGTTGGTAGTTACTGATGAAATTTATTTACCAAGTAGTCAAGGTTTCGAATTTTTTAGATGGGAACATAATTCATTTAATTGTCACGAATTAATTGTAAAGTTGTCTGCTGATAATGTAACTTCTGGGGCATATATTGAATTTTTAAGGATGATATCTTTTGTCTAGAT