Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_08446 LG2 6261844 6263664 PREDICTED: pollen receptor-like kinase 3
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/T 6262250 missense_variant p.Pro398His
C/T 6262312 synonymous_variant p.Thr377Thr
G/T 6262467 downstream_gene_variant
C/G 6263131 missense_variant p.Leu178Phe

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_08446.1
MAAVRFHNHLLLLFFHLFFTLSSSTETQSLLRLKQSLVNGDRSLSSWIPNVSPCSGTWLGVVCFNGVITGLHLSDLDLSGPIDVDALAEIRGLRTLSFINNSFSGPIPAFNKLGSIKSLLLTQNNFSGPIPNDFFTPLNSLKKLWLSGNRFNGTIPQSLTQLDLLKELHLEYNSFSGLIPNFSQRLKSLDLSFNKLEGPIPESLATFTVDSFVENKGLCGKPLVKTCEVSDTSYSMASSVGEEEYGSGWGRKVIVVLVVASVAALLFLLLTRKRRVEFTAVSRNSNAEEAVEVQVASVRGSVGERRENKRGDIVMVNEMRGVFGLQDMMKAAAEVLGNGGLGSAYKAAMTNGLCVVVKRMREGIARGLGFLYTEFSTYDLPHGNLKSSNVLLSDEYEPLLSDYAFQPLVNPNVAVQALFAFKTPDFVQNQKVSQKTDVYCLGIIILEVITGKFPAQYHSNGKGGTDVVQWAHSAVSEGMEVELIDPELSSNDTNSRNQMLKLLRIGVACTENNSDERPKMKEAIRRIEEVQV*


CDS Sequence:
>Vu_08446.1
ATGGCCGCTGTTCGCTTCCACAACCACCTCCTTCTCCTCTTCTTCCACCTCTTCTTCACTCTCTCTTCTTCAACCGAAACCCAATCCCTCCTCCGTCTCAAGCAGTCCCTTGTCAACGGCGATCGCTCTCTCTCCTCATGGATCCCCAACGTCTCGCCTTGCTCTGGCACCTGGCTAGGCGTTGTTTGCTTCAACGGAGTCATCACGGGCCTGCATCTCTCCGACTTGGACCTCTCGGGACCAATCGACGTCGACGCCCTTGCGGAGATTCGCGGCCTCAGAACTCTCAGCTTCATCAACAACTCCTTCTCGGGACCAATCCCGGCGTTCAACAAACTGGGCTCAATCAAGTCCCTCCTTTTAACCCAAAACAATTTCTCCGGACCAATCCCAAACGACTTTTTCACCCCGTTGAACTCCCTCAAGAAACTCTGGCTCTCCGGCAACCGCTTCAACGGCACCATCCCCCAATCCCTAACCCAGCTCGACCTCCTCAAAGAACTCCACCTCGAGTACAACTCCTTCTCGGGCTTGATCCCTAACTTCAGCCAACGGCTAAAATCGCTGGACCTCTCCTTCAACAAACTCGAAGGGCCCATTCCCGAGAGTCTGGCGACGTTCACCGTGGACTCGTTCGTAGAAAACAAAGGTCTGTGCGGTAAGCCGTTGGTGAAGACGTGCGAGGTTTCCGACACGTCGTACTCGATGGCGAGCAGCGTGGGAGAGGAGGAGTACGGGAGCGGGTGGGGGAGGAAGGTGATCGTGGTGCTGGTGGTGGCGTCGGTGGCGGCGTTGTTATTTCTGCTTTTGACGCGGAAGCGGCGGGTGGAGTTCACGGCGGTGAGCAGGAACAGCAACGCGGAGGAGGCTGTGGAGGTGCAGGTGGCGAGCGTGAGGGGGAGCGTGGGTGAGAGGAGGGAGAACAAGAGGGGGGACATAGTGATGGTGAACGAGATGAGGGGGGTGTTTGGGCTGCAGGACATGATGAAGGCGGCAGCGGAGGTGCTGGGGAACGGTGGGCTGGGATCGGCGTACAAGGCGGCGATGACGAACGGACTGTGCGTGGTGGTGAAGAGGATGAGGGAGGGAATAGCAAGAGGGTTGGGATTTCTTTACACTGAATTTTCCACGTACGATTTGCCTCACGGGAACCTTAAATCTAGCAATGTTCTCCTAAGTGATGAGTATGAGCCTCTTTTGAGTGACTATGCATTTCAGCCACTGGTGAACCCGAATGTTGCAGTGCAGGCATTGTTTGCATTCAAAACCCCAGACTTTGTGCAAAACCAAAAAGTTTCACAGAAGACAGATGTTTACTGCCTCGGAATCATCATTCTTGAAGTTATCACCGGGAAGTTCCCTGCCCAGTATCACAGCAATGGCAAGGGTGGTACTGATGTTGTGCAATGGGCTCATTCTGCTGTTTCCGAAGGAATGGAAGTAGAGTTGATCGATCCAGAGTTGTCATCAAACGACACAAATTCACGCAATCAGATGCTAAAACTTCTCCGTATTGGTGTTGCTTGCACTGAAAATAACTCTGATGAAAGACCAAAGATGAAGGAAGCTATTAGAAGGATAGAGGAGGTACAGGTTTAA


Promoter Sequence:
>Vu_08446::LG2:6263664-6265664(-)
GCTGACCCTGGCCACTGCAACGTTTTCTCGGTAATTTCATTTTCTCTTCCTTTATTAATTTCCTAAAGCAAAAGCTAAATACAATTTCGGAGTACTTTATAAGCATTGTAAAATTTGTTTAACTCGAAAATGCAGGCTTTCACGCGGTAATGCTATTATCTATAGTTTGAAGAAAAGAGGATATGGATCTGGATGAACATATGGTATTACATTATCAGTTTACTTTAAATATGTACTTTTTTTTTTTTAAATGTAAACTTTACAATTGACACCAACACCAAGTTTTTATTCTTTTAAAGAAAGTATTTTTTATTTTTTATTGCTTTTCTAGTTCCTAACTAAATTAAAAGTAGTCATTTAAATATTACTATATCGTTTATTATTTTACTTACTATCATGTATTGGAAATATCATACAAGAAGAAAGTTTAATGTGTTTAATTTAGTTTATGTTTATAAATATGAGAGAGGAAACATATGAATGAAAAGATCCTTATATAAAAAAGGTAAAATATTACTGAAAAAGAAATAATACAAAGTAATTAATTTTTTAATATTTATATTTTGAATTTGATGTAATATTGATTGTCTTACGTTCTATCACATATTGTGCTATTATATTTCTTTTTATTCTTTTTCAAATAAAAAAGAAAGAAAAGAAAGTTGTTAATGTGTGTAAATTAGTTATAAATTCTTTAATAATATGCAAAAAAATTGAATAGAATAAGTTTTTAATTATATTGAAATATGAAAGGAAATTATTATATAACATTAGATTCTCGTACTAGAATGATAAGGCAAAACATATGTACTGATAAAAAATTATAAATAAAATTGCAAAATTGATCCCAATCAAATAAACAAAATTAGTTATGTTTATTTTCTTTATATATTTAAATTTAACCAAACTTAATTACATACATGATTTAGAGAAAAGACGAGTATAAATTAATTTAAACTGAGAAAAACATAAATATCCTAAAATTTATCATGGATTTGAATGAATTTTTAAATTGAAACAAACCCTACTAAATGCATTAATTATTAATTTCATCTTGAATGATATTTTCTTCCTTAAATGATGATTTAAACAATTTTATACAAGACGAGAAGTTAAGAATTATATATATATATATATAAAGACATTTATATTTGTTTTTTAATTTTACTTTTTAAATAATTTTTTTAAATTAAAATAATTATTTTACTAATTTGACTGTTTAAGAAAATATTTTTAAAAATTTTAATTATTTTTTTACTCAACAGATTTTTCTAAATTTAATTATTATTTTTAATTAAAAATTACGTACAAAATAAATAAAAACTATTTATATCAAAATTATAAAAATTCTTTATGTTCAATTTTGTAATAATAATATAATAATTTGATTACTTTTTGTTATCGTAAAAAAAAGTAAACACATAATTCAAACCTTAATTAAAGTTAGAGGAATAAAACACAAATATTGTCACAAAACAATGTAAAATAGAAATTGAAGTTAGAAAGTGTTGTAAATGGTAAATTTCATCCAAGATGTGTTAGAAATCTTGTTTTCTTTTATAAGCCAATGGTTGTTTTTTAATATTATTTTAAATTTTTTAAAAAGTATATTAAGTTAAAATAATATAATTATAGATACCAAACTATTGAAATAAGGTGTAGAGAAAGATATGTGGCAAGTTTGGGTTTCCATGCCCCAAACCAATAGTATATGAACTCCAAACATATCGGAAGGAACCAAAGGAGCACCATGTCCAGTGCAACATCCATCTATTCTTAGAATCTCCGACGGCATTTCTGGCAAAAACACACCATCATCACTCATCCCCCTCTCTTCTCTCTTCTCTCCTCTCTCTCACCCCCAAACACCAAAACAACACTAACCCAAACTCCAACATGACACCCCGCCTCACTTTCCCTTCCCAATACCAACCTCCCTCTCAAAAAACAAACAACCTTAGTCTCTACGAGCAGCGGTCCATTGTTCCGACAACCACCCA


Gene Sequence:
>Vu_08446(-)
ATGGCCGCTGTTCGCTTCCACAACCACCTCCTTCTCCTCTTCTTCCACCTCTTCTTCACTCTCTCTTCTTCAACCGAAACCCAATCCCTCCTCCGTCTCAAGCAGTCCCTTGTCAACGGCGATCGCTCTCTCTCCTCATGGATCCCCAACGTCTCGCCTTGCTCTGGCACCTGGCTAGGCGTTGTTTGCTTCAACGGAGTCATCACGGGCCTGCATCTCTCCGACTTGGACCTCTCGGGACCAATCGACGTCGACGCCCTTGCGGAGATTCGCGGCCTCAGAACTCTCAGCTTCATCAACAACTCCTTCTCGGGACCAATCCCGGCGTTCAACAAACTGGGCTCAATCAAGTCCCTCCTTTTAACCCAAAACAATTTCTCCGGACCAATCCCAAACGACTTTTTCACCCCGTTGAACTCCCTCAAGAAACTCTGGCTCTCCGGCAACCGCTTCAACGGCACCATCCCCCAATCCCTAACCCAGCTCGACCTCCTCAAAGAACTCCACCTCGAGTACAACTCCTTCTCGGGCTTGATCCCTAACTTCAGCCAACGGCTAAAATCGCTGGACCTCTCCTTCAACAAACTCGAAGGGCCCATTCCCGAGAGTCTGGCGACGTTCACCGTGGACTCGTTCGTAGAAAACAAAGGTCTGTGCGGTAAGCCGTTGGTGAAGACGTGCGAGGTTTCCGACACGTCGTACTCGATGGCGAGCAGCGTGGGAGAGGAGGAGTACGGGAGCGGGTGGGGGAGGAAGGTGATCGTGGTGCTGGTGGTGGCGTCGGTGGCGGCGTTGTTATTTCTGCTTTTGACGCGGAAGCGGCGGGTGGAGTTCACGGCGGTGAGCAGGAACAGCAACGCGGAGGAGGCTGTGGAGGTGCAGGTGGCGAGCGTGAGGGGGAGCGTGGGTGAGAGGAGGGAGAACAAGAGGGGGGACATAGTGATGGTGAACGAGATGAGGGGGGTGTTTGGGCTGCAGGACATGATGAAGGCGGCAGCGGAGGTGCTGGGGAACGGTGGGCTGGGATCGGCGTACAAGGCGGCGATGACGAACGGACTGTGCGTGGTGGTGAAGAGGATGAGGGAGGTGAATAAGATAGGGAAGGAGGTGTTCGACGCCGAGATGAGGCAGTTCGGCAGGATACGACACCGTAACATCATCACTCCCCTGGCTTACCACTACAGGAGGGAGGAGAAGCTCCTGATCACCGAGTACATGCCGAAAGGAAGCTTGTTCTATGTATTGCATGGTGATAGAGGTCTATCACATTCTGAATTGACATGGCCAATTCGTTTGAGGATTGTGAAGGGAATAGCAAGAGGGTTGGGATTTCTTTACACTGAATTTTCCACGTACGATTTGCCTCACGGGAACCTTAAATCTAGCAATGTTCTCCTAAGTGATGAGTATGAGCCTCTTTTGAGTGACTATGCATTTCAGCCACTGGTGAACCCGAATGTTGCAGTGCAGGCATTGTTTGCATTCAAAACCCCAGACTTTGTGCAAAACCAAAAAGTTTCACAGAAGACAGATGTTTACTGCCTCGGAATCATCATTCTTGAAGTTATCACCGGGAAGTTCCCTGCCCAGTATCACAGCAATGGCAAGGGTGGTACTGATGTTGTGCAATGGGCTCATTCTGCTGTTTCCGAAGGAATGGAAGTAGAGTTGATCGATCCAGAGTTGTCATCAAACGACACAAATTCACGCAATCAGATGCTAAAACTTCTCCGTATTGGTGTTGCTTGCACTGAAAATAACTCTGATGAAAGACCAAAGATGAAGGAAGCTATTAGAAGGATAGAGGAGGTACAGGTTTAA