Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_08419 LG2 5844872 5845903 PREDICTED: transcription factor MYB114-like
Map

Annotations  
category   relationship type   keyword
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
SNP Position Effect Amino acid change
G/A 5844987 missense_variant p.Arg39Lys
C/A 5844990 missense_variant&splice_region_variant p.Ala40Asp
T/A 5845002 intron_variant
A/T 5845026 intron_variant
T/C 5845157 stop_lost p.Ter69Argext*?
T/C 5845199 stop_lost&splice_region_variant p.Ter83Glnext*?
G/T 5845319 intron_variant
C/T 5845374 intron_variant
C/T 5845474 intron_variant
T/G 5845497 intron_variant
T/A 5845505 intron_variant
C/T,* 5845523 intron_variant
G/A,* 5845524 intron_variant
C/G 5845553 intron_variant
T/C 5845592 intron_variant
A/G 5845602 intron_variant
T/A 5845617 intron_variant
A/T 5845618 intron_variant
C/G 5845690 missense_variant p.Thr97Arg
G/T 5845729 missense_variant p.Arg110Met
T/C 5845749 synonymous_variant p.Leu117Leu
T/C 5845767 missense_variant p.Cys123Arg

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_08419.1
MEPKNCCEKEGAWSSDEDQILFKYVELTGEGNWTDLPERAGLKRCGESCKHRWLNYLKPTIPRDNFLWDEQELIIRLHKLLGNRWSMIAGRLPGRSEDEIKKYWNTYLSKKVEEKKKVVRSSSMSSVESPWLSENEHAMNSMESPKPVIVRPKVVRLTKPVVARLVGA*


CDS Sequence:
>Vu_08419.1
ATGGAACCGAAGAACTGTTGTGAAAAAGAAGGAGCATGGTCTTCTGATGAAGACCAAATCCTCTTCAAGTACGTTGAACTCACTGGAGAAGGAAATTGGACAGACCTTCCCGAAAGAGCTGGGTTGAAAAGATGTGGTGAGAGTTGCAAACATCGATGGCTGAACTATCTCAAGCCAACCATCCCCAGAGACAACTTTCTTTGGGATGAACAGGAACTCATCATCAGACTGCACAAACTCTTGGGGAATAGATGGTCAATGATTGCAGGAAGATTACCAGGACGCAGTGAAGACGAGATAAAGAAGTACTGGAATACGTATTTGAGCAAGAAGGTAGAAGAAAAGAAGAAGGTTGTGAGAAGTAGTAGCATGTCTAGTGTTGAATCTCCATGGTTGTCTGAGAATGAGCATGCTATGAATTCCATGGAGTCTCCAAAGCCTGTGATAGTTAGACCTAAAGTTGTTAGGTTAACCAAGCCTGTGGTGGCAAGACTGGTAGGTGCCTAA


Promoter Sequence:
>Vu_08419::LG2:5842872-5844872(+)
TATCCCTAACACTCCAACGGTCTTTCATTCTCACTTAGAGAGGATCGACGCGTGTGGTGGGAGTAGTGGGAGGTCCTAGGGTAGACGCTATCACTGGAGGTCTATTCCGCGGTAACGGATTAGCCTTGTGTATGGTCGGGTGGAACCCCTCGGCAATGGCTTTGCAAAGCAGTAGAGGCCATCACAAGTGCACAACCCGCCCCAGCTCTACATACATTCTATGTCCGGACGTGTCTAGAGTCTTAACATGATAGGATACTTGTCTTGATGAGTGTTATTAAATAAATGCTTATGTTTATGATGACTTATGTGTATGGATATTCTGGTAAATGCTAGATTGGTTGAAAATGAATTGTATGATTGTTTGAGATCTAGCTCACCCTTGCATTTGTGTGTGTTGCATGTGTTTGATTTCCCTCTTGCGATGATCATCCAATCCTTTGGATGTGAGCAGTAGGTGATGATGTACCCTTGGAGCAAGCGTTGGAGAATGAGGAAGACCCAGCTCCTAGTGCTTAGGATTTCTTCTAGCTATGATGTTCAATAGCTTTTTATTTGAAAAACTTCTAGCCTTCATTTTAGCATGATCTGTATTTTGGAGAATTATGAGCTTGTACTTATATTTAAAGTTTTCCAGTCAGACTTGGATAACTGTACTCCTAATTCCATCTATTGCGTACTCCTAACTGTTTCTATTATTATAATTGATGCATTCTACGTATATACTTTGTTATATATTTTGGAGATGTCACATGTATTACTTTTATTATATTTGTATGATAACTTTTTAAATTTTATCTTTTACTTTTCAAGTCAACAACTTTATCTGACACGATAGCAATCAGTTAACATTTTCACTATAAAATACATTTTCTTTTAGTTTTCCAAATATATTTTTATATTTAATTATACTATATATTATTTTATTTCGCATTAATATTGTTTTCTTTTCTGCTTCTTTTATAAAAATATTATAGAAACAGAATTTTTTCTTTACATAAATGGCAGGACAGGATGTATTTTAATCTAATGAAATTTTCTAAAAAGTATTCTTTGTTCTCACAATTTTGCAAGGTCCCTCTTCATTAGTTGGCTTAAGTACCGTATAAATTAAATGTTACATTTTAATGATACATGGTTTATTTAATAAAACATTAGACGTGATCGATGAGATGACCATGCTTGTCATTTTATTTGGTTATTTATAGAATTAAATGAGAGCAAATAAAAAAATAGTTATACTTGTCTGGTTGGAAAGAAAAGAAATGAGAGAGTTAATTAAAAGTCATATAGTTTTTTTTATTGAGAAATAATACTTGAATACACACCAATTTTTTATATTTATTTAATATTATCTTTTTTTTATTTTTTTTTCTTGACAAAATATAAACTTAATTTATTTATAACTATTTTACCTTCATATAAAAGTGTGTCATTCTATTATTATTATTATTTTATTTTATTTTTTATCTACTTTTTACTCATTTACTTTACTAAGATACAAGATGAAAGTCATAATTTAGTTTTTCGAAATTCCAATTGTAATAATGAATAAAAAAAATCTATTTGAATAAATAATGTATACCTAGGTCAAATTGTGTAATTTTTTTAAAATGATATTATTTAAGAACAAAAATTGGCAACTGTATAGTGTGGCTTCTGTTGCACCATTTATCTGTGAGCTTATCAGTTTTTGGTATGACACACAAAAGTTAGAATGAGAACACTGACAAACTTCCAAACACTTCCAAACACGAGTAGACCAGTTTAACAGTGTAATTGATTAAAAAAATATTTTGACACATATAATTTTTTTTATATTTATTTAACTTTTTTATGTTAATTTTATTAAAAATAATACAAAAAATTACTTTTTTATACTCTTGTGAAATAAATATAAAAGTGAACTGAAGTGACCTTCTTCGGTTTCAGACTCTTTCTTTCTCTACACTTATAAATTGAGTAAACAGACAGAAAGATTCTGCATTTTGAGTTGCCCA


Gene Sequence:
>Vu_08419(+)
ATGGAACCGAAGAACTGTTGTGAAAAAGAAGGAGCATGGTCTTCTGATGAAGACCAAATCCTCTTCAAGTACGTTGAACTCACTGGAGAAGGAAATTGGACAGACCTTCCCGAAAGAGCTGGTACATATATGCAAAGAATTACCATCTTTTTCAAAAAGAAAATTCTGAATTTTGATTCTCTTTCGCTTGTGCCGAATAGGGTTGAAAAGATGTGGTGAGAGTTGCAAACATCGATGGCTGAACTATCTCAAGCCAACCATCCCCAGAGACAACTTTCTTTGGGATGAACAGGAACTCATCATCAGACTGCACAAACTCTTGGGGAATAGGTATATATATATATTGCTTTTCTGATTTTTTCTTCTCCATTTTCTTTCAATTAACCTCAATTTTAAGCCAGTGTAAGCTACCTTTGTTTTTCCAGTGCGTTTCTGGAAGTGCTTTCTGATAATGAGAAGAAGCACTAGGAATCGTAAGAAAAAGAAACAAATTTTGTTCAAACGTGGTTTTGACAAGAGTATTCTTTTTCAATCCAAGTTATTCTTCTGTCTTTTTCAATAGTATTCTTTTCAAATCCTGATATACTTATAAATGTAATATACATTATTATATTTACGAGACAATTTAAAAATTAAAAATGTATATAATTACGTTAATTTCATTTTTTATTTATTTTTATTCTATAAGTAGTTGCAAAAAACTAGATTGCCACATCCTAATTCAAATTGTATATTTGTTAAAAAATATTAATAAAAAAATAAAATATGTGGCACAGATGGTCAATGATTGCAGGAAGATTACCAGGACGCAGTGAAGACGAGATAAAGAAGTACTGGAATACGTATTTGAGCAAGAAGGTAGAAGAAAAGAAGAAGGTTGTGAGAAGTAGTAGCATGTCTAGTGTTGAATCTCCATGGTTGTCTGAGAATGAGCATGCTATGAATTCCATGGAGTCTCCAAAGCCTGTGATAGTTAGACCTAAAGTTGTTAGGTTAACCAAGCCTGTGGTGGCAAGACTGGTAGGTGCCTAA