Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_08382 LG2 5490166 5493607 PREDICTED: putative transcription factor bHLH041 isoform X1
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/A 5490386 intron_variant
A/T 5490393 splice_region_variant&intron_variant
G/C 5490706 missense_variant p.Leu107Phe
T/G 5490763 intron_variant
T/C 5490869 intron_variant
C/T 5491329 stop_gained p.Gln216*
G/A 5491605 missense_variant p.Ala308Thr
G/T 5491705 missense_variant p.Arg341Ile
G/A 5491775 splice_region_variant&intron_variant
G/C 5491935 intron_variant
C/A 5492036 missense_variant p.Ala381Asp
A/T 5492154 synonymous_variant p.Arg420Arg
C/T 5492429 intron_variant
T/G 5492529 intron_variant
C/T 5492638 intron_variant
T/G 5492808 intron_variant
G/C 5492812 intron_variant
C/A 5492816 intron_variant
T/C 5492963 intron_variant
A/T 5493115 intron_variant
T/A 5493247 intron_variant
A/G 5493320 intron_variant
T/A 5493326 intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_08382.1
MHPMENVFSLPVAARADFMQFLLQSFGCSYICLWAYDSISPNRLCFLDGIYNVRNDQPGSSLGTVAQQLFRQFRTLTFDVNDDRVPGLAFRNQRPYLELQRLELLRLASTEIQTQFFQEARIKSAVFMGCNKGEIELGFLNMSQVDIQTALRSLFPAEFSTGQSQQIDQNPPTSSSSSLRSISTGSPEYSSLLFSIPGTSQSHFPETLGGARVSPMQPVPNTATGSHQQAIQALAQAPLTQFPTPETEHDAIMKAILHVISPTSHQHQNLPFDPVVHPDASAFQRYRSDIGPNIASNIRKQSFMKRSFAFFRNLNFMRMRERIQATSRPTNTQLHHMISERRRREKLNENFQALRALLPPGTKKDKASILIAAKDTLSYLMAEVDQLSKRNQGLKSLLPSKEPTTEETKARLSPNERLSVRVSHVPESSSSQERMVDLQVNVRGQLSQIDLSICLLEFLKQCLNMSLVSMDANTHIAEGNNEIHQLTFRLRIIQGSDWDECTFEEAVRRVVADLAQYKED*


CDS Sequence:
>Vu_08382.1
ATGCACCCCATGGAAAATGTCTTCTCTCTTCCTGTAGCCGCCAGGGCTGATTTTATGCAATTTCTGTTGCAGTCTTTTGGCTGCAGTTACATCTGTCTGTGGGCATATGATTCCATTTCACCCAATCGTTTGTGCTTCTTGGATGGTATCTACAATGTAAGAAACGACCAACCGGGCTCTAGTTTGGGGACTGTGGCACAACAACTTTTCAGACAGTTCAGGACTTTAACATTTGATGTTAATGATGACCGTGTTCCTGGACTAGCTTTTAGGAACCAGCGTCCCTACCTAGAGTTGCAACGATTGGAACTTCTGAGACTTGCATCAACAGAAATACAAACACAATTCTTTCAGGAGGCGAGGATTAAGAGTGCTGTTTTCATGGGGTGTAACAAAGGAGAAATTGAGCTTGGTTTCTTAAATATGTCCCAAGTTGACATTCAAACAGCACTTAGGAGTTTGTTTCCTGCAGAATTTTCCACGGGACAGTCCCAGCAAATTGATCAAAACCCTCCCACATCATCTTCATCTTCTTTGAGATCAATATCCACAGGTAGCCCTGAATACTCATCTCTTCTGTTCAGTATTCCAGGCACTTCTCAATCCCACTTCCCTGAGACACTTGGAGGAGCAAGAGTGTCCCCAATGCAGCCAGTGCCAAACACAGCCACTGGTTCTCACCAACAAGCCATTCAAGCACTGGCACAAGCCCCTCTAACCCAATTCCCCACACCAGAAACTGAACATGATGCAATCATGAAAGCAATCCTCCATGTTATATCTCCAACTTCTCATCAGCACCAAAACTTGCCCTTTGATCCAGTGGTTCATCCAGATGCCAGTGCTTTCCAGAGGTACAGATCAGACATTGGTCCTAATATAGCTTCCAATATCAGAAAGCAAAGCTTCATGAAGCGATCTTTTGCATTCTTTAGAAACTTAAACTTTATGAGAATGAGAGAACGCATTCAAGCAACGTCCCGTCCCACTAATACCCAGCTGCATCATATGATATCAGAGAGAAGAAGGCGTGAGAAACTAAACGAGAATTTCCAAGCACTTAGAGCATTACTTCCTCCGGGAACAAAGAAAGATAAAGCGTCTATACTAATAGCAGCAAAGGACACATTGAGCTATCTAATGGCTGAAGTTGATCAACTAAGCAAAAGGAATCAGGGTTTGAAATCACTTTTGCCATCCAAAGAACCTACAACTGAAGAAACCAAGGCTAGATTATCTCCAAATGAAAGATTAAGTGTCCGAGTTTCACATGTACCCGAATCAAGCTCGTCACAGGAGCGAATGGTGGACTTGCAAGTGAATGTGAGAGGACAACTTTCTCAAATTGATCTGTCAATCTGCTTATTGGAATTCCTAAAACAGTGTCTCAACATGAGCTTGGTTTCCATGGACGCAAACACCCACATTGCAGAAGGAAATAATGAAATTCATCAACTAACCTTCAGATTAAGGATTATTCAGGGAAGTGATTGGGACGAGTGTACCTTCGAGGAAGCAGTGAGAAGAGTGGTTGCTGACTTGGCACAGTACAAAGAGGACTAA


Promoter Sequence:
>Vu_08382::LG2:5488166-5490166(+)
GTTTTAGATGACTGTAATTTCGTGTTTAAATTGCAAGTCATATTCTAACTGTTCTCTTTATTGGGGATGTCGACTTCTAAATTATATGATGTGGTTGTTATATTTTGGGGTGTCACATTATTTCGTATGTGTTAGTTGATTAAATCCTTTTAATTCACTCACTTATTTATCTTATCAGGTTTCAATTTTATTCTCTACTTTTTTAATTATTAACTGATCAACTAGGTCAAACATTATTCAGAGACCAGTAGAATTTTTTTTTAGTTATTTATTTTTTTGTCTTTCTCGGCATTGTGAAGAATAAGCTGATTTAATAATGTATATCCCAAATATAGTATTATGGACCACACCAATGGTAGTTGCAGAATCTTGCATACATTCAAGATTAATCAAACGTGGCTGCTGGATTCTATAACTCACACATGAATATTAAAAATAGTCAATTGAAGATCAATAACTTAAGTACTAACATTACCACTTAATCCACGTATGTGAACAAATAAAATAGATTTTTCGTTTATTGCTAAATAATAGAGTGGCAAAATAAATAAATAATTTAGGAGAGTTACAAGTTGATGCAGCGATCGACTTAGTACAAATTAAACTAAAAAAATCAGAGTCAAAGTTACAATATTATTGGTAAACAAATAGGTTAATTTAGTTGTCTCTTTTGAGAACTTGTTTAATCACACACATCATAGTGAATGAGTGGATGTTATATTTTAATAAAGTGCAAAGAAACAAGTATTTATCAAAAGGTTGTTAGTACAAATAATTTAACACTTAAGTTCATTAATTAATAACTAAGATTTTGAATCTTTCATTTATATATAACAATTAAATATATATTATCTTAAAATGAGTTTATGGGTAAGAAAAAATTAACGTCTATTTTCTATTAAATATATATTATCTTAAAATGAGTTTAAGGGTAAGAAAAAATTAAATATCACGTCTATTTTCTATATTAATTATAATTATAATTAGTATAAGAATACCATTACATTCATTTTTTATATATGTTATAATTAAGTTGGTATGAAAAAAAAAAGTTATTTTATGAAATAATCGTTGTATAATTATTTTAATTTAACCAATAACTTTAAGTTTAGGATTTAGGGTTGGAGAAAAATTATGTTGTGAAAGCATTAGTGTCCTTGTCTGTGTAATTTAGAGAGAAGCTTCTTGTTCTAAACATAGATATGTGGCCTAAAAGGAAGCAAATATAAAACTGTATATAGAAATTTCAAAAGAAATGTGGAAAGAAAGGCCGTGCCTTCCAGCCTTGACTAATTTTCAAAGCATTCAAGCATCGACTTTGACTTTACTACTTTTCCACCATTTCCTTCCTACTCTACTTTTCTTTCATCCTTTCGCTTTCCATCTCAATGTCATCTTCCTTCTTCCTGTCTTCTTCTCTCAGTTCAGTGTTTCAGACACACTACTTTTCAAACTCTAACTTCCCAGCAACAGCTCCATATTGTTTTTCCTACGTGCAGGTGCTGCTTTTATTTCTTTTCTTTTTTCCGGAAACTCTACTTTTATCTATTTTCTCCTCCATTCATTTGGGTTTCACATTTCTTATCATCATGTCTCTTCTGATAAACATTTCCTCGTAGTGGTATCAACCAACTTTAGTACTTTTCAAAACCCTTTCTTTCTCTCTTTGATTCTTTCTTTCTTTCTTTCACACGTGAAATAAATACACATCTTGAAATTTTCAATGGATAATTATTTATGAGGTTTGAAAATTATTTTGTCTCCCAATCCTAGCTAGCATCATTGTTCATACATTATAGTATTGTATCTCTGATTTTTTTTTTTTGTTTATTTTGCCGATGGAACCAAGCCACTCCCTCACTCATATAGCAGTAGTTTGCATCTCCTAAAAGTAAATTCAAATGGCATATAGAAAGGAGAAGAAAAGTATTACTAGAGGCACAAAACATATTCTCTTCTTTCTCATGATCATGATGCAAAAGCATTAGCATCAAGCACCA


Gene Sequence:
>Vu_08382(+)
ATGCACCCCATGGAAAATGTCTTCTCTCTTCCTGTAGCCGCCAGGGCTGATTTTATGCAATTTCTGTTGCAGTCTTTTGGCTGCAGTTACATCTGTCTGTGGGCATATGATTCCATTTCACCCAAGTATATTTATGCATATACACACACATTATTCTATATTTTCATTATAAACATGTCATAGTTCTTATCACAACTTGGTCTGATCTTTTCTTTTCTGGCAAAAATAGTCGTTTGTGCTTCTTGGATGGTATCTACAATGTAAGAAACGACCAACCGGGCTCTAGTTTGGGGACTGTGGCACAACAACTTTTCAGACAGTTCAGGACTTTAACATTTGATGTTAATGATGAGTAAGTGTTCCATTACTTTTAACGCAAATCGACATATTTATTTGCATTTGAATGCAATAAATATAGACAATTTGCTTTTAAGAAAAAGGTAAACGTGTGCTTTTGTTTTATTCAGCCGTGTTCCTGGACTAGCTTTTAGGAACCAGCGTCCCTACCTAGAGTTGCAACGATTGGAACTTCTGAGACTTGCATCAACAGAAATACAAACACAATTCTTTCAGGTAATTTATTCTTCTGACGGAAGATAATTCTCTTCAAAGTTATATTTAAGCATCTTTTTATACTAAGATTAGTTTTTTATTTTGCAGGAGGCGAGGATTAAGGTTCGTCTGTTGTCAAAGAACCTGAAAATACTTTACATTAATTTTGTTTCCTAATGATATTCATGATGAACCAGGGATCTTATAACTGATAATGCTTGTGCCTTATATATATTATTCTCAGAGTGCTGTTTTCATGGGGTGTAACAAAGGAGAAATTGAGCTTGGTTTCTTAAATATGTCCCAAGTAAGAAACTATACGTAATGCCAATTCCATTAACCAGAGAAGTATCAATGCTGTATAATTATTTGAATTTTGATTTCTTTCTGTGCAGGTTGACATTCAAACAGCACTTAGGAGTTTGTTTCCTGCAGAATTTTCCACGGGACAGTCCCAGCAAATTGATCAAAACCCTCCCACATCATCTTCATCTTCTTTGAGATCAATATCCACAGGTAGCCCTGAATACTCATCTCTTCTGTTCAGTATTCCAGGCACTTCTCAATCCCACTTCCCTGAGACACTTGGAGGAGCAAGAGTGTCCCCAATGCAGCCAGTGCCAAACACAGCCACTGGTTCTCACCAACAAGCCATTCAAGCACTGGCACAAGCCCCTCTAACCCAATTCCCCACACCAGAAACTGAACATGATGCAATCATGAAAGCAATCCTCCATGTTATATCTCCAACTTCTCATCAGCACCAAAACTTGCCCTTTGATCCAGTGGTTCATCCAGATGCCAGTGCTTTCCAGAGGTACAGATCAGACATTGGTCCTAATATAGCTTCCAATATCAGAAAGCAAAGCTTCATGAAGCGATCTTTTGCATTCTTTAGAAACTTAAACTTTATGAGAATGAGAGAACGCATTCAAGCAACGTCCCGTCCCACTAATACCCAGCTGCATCATATGATATCAGAGAGAAGAAGGCGTGAGAAACTAAACGAGAATTTCCAAGCACTTAGAGCATTACTTCCTCCGGGAACAAAGGTACTGAACTAATCCATTCTATATTCTTCTATAAGCAATGCTTTCTGCAATTAGCAAAACTCAACACAACCATAGCTATAGGTAATGTTGATTTCTAATCAATCGACCACAAAGGTTGTACACTATATATGATAATTTAAACTTTGCCAATATTTCATGTGTGGTGTATTCCTATTAAGGCCTTGAATTTTAACATGGTATAATTTGTTAGAAAGATAAAGCGTCTATACTAATAGCAGCAAAGGACACATTGAGCTATCTAATGGCTGAAGTTGATCAACTAAGCAAAAGGAATCAGGGTTTGAAATCACTTTTGCCATCCAAAGAACCTACAACTGAAGAAACCAAGGCTAGATTATCTCCAAATGAAAGATTAAGTGTCCGAGTTTCACATGTACCCGAATCAAGCTCGTCACAGGAGCGAATGGTGGACTTGCAAGTGAATGTGAGAGGACAACTTTCTCAAATTGATCTGTCAATCTGCTTATTGGAATTCCTAAAACAGTGTCTCAACATGAGCTTGGTTTCCATGGACGCAAACACCCACATTGCAGAAGGAAATAATGAAATTCATCAACTAACCTTCAGATTAAGGATTATTCAGGTATGTCAATATTTATCTCTAGAACAATTCATGAAATACTGTACAAAGTTAGAAACAAACGTTATATTAAAACGGAAGCTGTGGTCATGTATAACTTTTGTTTAAAATTGTGGGTTCAACAGACAATACTATAAGTATGAGATTTGGTATATATATAGAGTACACTATTAATACGATATACCAAAATGCCAGCATGCATATATTTACAATGTTTACATTGATCATTTTATTTTATCTTACAAAAAACTATATAGCCACACGTGGCTAAAATATACGTGAGGGTGATAGAAAATATATTACATATGAAGTAGTTTTTGTTTATACATATATATAGTAAAGTACAGAAAGTTTGTTCATGAAAATATAGTAAGGAAGATGATAAGTTTCAAAATGAGTCAGGCATGCAGGACATAAATATTCAAACAAAAGAAATGTTTAGTAACCATTTGCACTATGTCAAACTTTTCAAAAGTGGGTGGCGCAGGATAAGTCTATCTCTGCATTATGAGAGTAGAATTATGCATACAAAATCAGAATTAGATGAGAAAAAAAGTGGCGGCTTCTTTTCTGCAGGATCCAAGAACCCCCCTCGATCAGAATTTACAATGATGAAAAATATATATTTCTTTTTGTTTTAAAGTTAAAACGAAGTAACTTCGAAAGTGCAGTTGATGATAGTGAAGGTGTGGTTTGGTGTGGTTTGTCACCATCTCTGATGTCACAAAATGGCATATTCAATTCAAAAAAGTTGGTTCTATTTTGGCAGCCATCGAACATACGCATGAGTCAGAATGAATATGTTGATAACTTCCATACGTATAAAGTTGCCTCCTAAAAGAAGAAAACTAAACTTGTGGTGATGGTGGTGGCTGTTGGGTGCATTATATTACACAAAACGACTAAATAACGTCACTGTTATAGTATTGTATATTCCAAGTCCCGTTTCAATTTGTTTTCATACAGTCTACAACCAAATAATATACTATACTGTTATATCACATTGCATGTAGTATTTGCCGTCACATGTCGGAAATGACATTAAAACTCACAAAAACAACAAAGTCGCTCTCAAAGACTATGTAGCAGAAGTTTATAATTAGTAGGGACACTTGTTGTTGCTGTGAAGAATAATGAGGTTTTGATGTTTGTGTAGGGAAGTGATTGGGACGAGTGTACCTTCGAGGAAGCAGTGAGAAGAGTGGTTGCTGACTTGGCACAGTACAAAGAGGACTAA