Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_08317 LG2 4668174 4670044 PREDICTED: TMV resistance protein N-like
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/G 4668240 missense_variant p.Val508Ala
A/G 4668464 synonymous_variant p.Ile433Ile
G/T 4668482 synonymous_variant p.Gly427Gly
C/T 4668557 synonymous_variant p.Ala402Ala
C/G 4668559 missense_variant p.Ala402Pro
T/A 4668651 stop_lost p.Ter371Leuext*?
C/T 4668671 synonymous_variant p.Thr364Thr
T/C 4668688 missense_variant p.Met359Val
T/A 4668743 synonymous_variant p.Val340Val
A/G 4668840 missense_variant p.Ile308Thr
A/G 4668942 missense_variant p.Leu274Pro
G/A 4668944 synonymous_variant p.Cys273Cys
C/A 4669005 missense_variant p.Arg253Ile
G/T 4669013 missense_variant p.Phe250Leu
A/T 4669018 stop_lost p.Ter249Lysext*?
G/A 4669038 missense_variant p.Thr242Ile
T/C 4669095 missense_variant p.Tyr223Cys
G/T 4669110 missense_variant p.Pro218His
C/T 4669116 missense_variant p.Arg216Lys
A/C 4669125 missense_variant p.Val213Gly
C/T 4669148 synonymous_variant p.Ser205Ser
T/A 4669163 missense_variant p.Gln200His
C/T 4669251 missense_variant p.Gly171Asp
C/G 4669252 missense_variant p.Gly171Arg
A/G 4669290 missense_variant p.Leu158Pro
C/T 4669320 downstream_gene_variant
A/G 4669388 downstream_gene_variant
C/T 4669391 downstream_gene_variant
A/T 4669399 downstream_gene_variant
T/C 4669415 downstream_gene_variant
T/A 4669425 downstream_gene_variant
C/A 4669458 downstream_gene_variant
G/A 4669490 downstream_gene_variant
A/G 4669492 downstream_gene_variant
G/T 4669716 missense_variant p.Ala110Asp
C/T 4669741 missense_variant p.Val102Ile
C/T 4669755 missense_variant p.Arg97Gln
C/T 4669841 synonymous_variant p.Leu68Leu
C/T 4669870 missense_variant p.Ala59Thr
A/G 4669871 synonymous_variant p.Val58Val
T/A 4669895 synonymous_variant p.Gly50Gly
C/T 4669934 synonymous_variant p.Lys37Lys
G/T 4669960 missense_variant p.His29Asn
G/A 4669979 synonymous_variant p.Ile22Ile
T/C 4669991 synonymous_variant p.Arg18Arg
A/G 4669994 synonymous_variant p.Phe17Phe
G/T 4670000 synonymous_variant p.Val15Val
C/A 4670011 missense_variant p.Asp12Tyr
A/C 4670041 missense_variant p.Ser2Ala

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_08317.1
MSASNVPEIKYDVFVSFRGKEIRDGFLSHLTEAFDMKKINGFVDDKLERGEEIWPSLVAAIERSAISLIIFSPDYASSRWCLEEVLKIVECKEKYERIVIPVFYKVAPTAVRHQSGSYENAFANHRLNYTRQVQMWKDALKKSADLSGIESSKFRNDAEVVKEIVDLVVKRLDKPQVNPKGLVGIDEKIATLESWISDEPKATQLVGIWGMGGIGKTTLAEVVFHRLRSQYQESYFLANERDQSKKHGLIHLKKIMFSKLLGHEVDIDTPNYLPENIVRRIGCMKVLVVLDDVNDSDHIEKLVGTLENFGKGSTVIVTTRDEQVLRINRVRKTYKVKEFSTDEALELFKLNAFSGSGSDEEKEYDEISKSVVHYAKGNPLVVKVLGHLLHGRNKEEWESLLGDLKTMPPREVYDVMKLSYDSLDRKGQQIFLDLACFFLRMLVPVQVSDLKCLLKDNESDNSVAFELRRLEDKALITISEDNTVSMHDSLQEMAWEIVRQESVEDPGSRSRLWDPNDINQALENEKVED*


CDS Sequence:
>Vu_08317.1
ATGTCAGCCAGCAATGTTCCTGAAATAAAGTACGATGTTTTTGTCAGCTTTAGAGGCAAGGAAATCCGTGACGGATTTCTTAGCCATCTGACTGAGGCATTTGACATGAAGAAAATAAATGGCTTTGTAGATGATAAACTTGAGAGGGGAGAAGAAATATGGCCATCACTTGTTGCAGCTATTGAAAGATCAGCCATTTCGTTGATCATCTTCTCACCAGACTATGCTTCTTCTCGTTGGTGTTTAGAAGAAGTTCTGAAAATAGTTGAATGTAAAGAGAAATATGAACGGATTGTAATTCCGGTTTTCTACAAAGTGGCACCAACAGCTGTAAGACATCAATCTGGAAGTTACGAAAATGCATTTGCTAACCATCGACTAAACTATACCAGACAGGTGCAAATGTGGAAAGATGCTTTGAAAAAATCTGCTGATTTATCTGGAATTGAATCGTCCAAATTTAGAAATGATGCTGAGGTGGTTAAAGAAATTGTCGATCTTGTGGTGAAGAGGTTGGATAAACCCCAAGTTAACCCAAAAGGACTTGTTGGAATCGATGAAAAAATTGCTACTTTGGAATCATGGATAAGTGATGAACCAAAAGCCACTCAACTCGTTGGAATTTGGGGTATGGGGGGTATTGGTAAGACAACCCTTGCAGAAGTGGTATTTCATAGACTACGATCTCAATATCAAGAATCTTACTTCTTAGCCAATGAAAGAGACCAATCAAAAAAACATGGATTAATTCATTTGAAGAAAATTATGTTTTCTAAGCTGTTAGGACATGAAGTGGATATTGACACTCCAAATTACTTGCCTGAAAACATTGTTAGGAGAATTGGTTGTATGAAGGTTCTTGTTGTTCTTGACGATGTGAATGATTCAGATCACATAGAAAAACTGGTGGGAACTCTTGAAAATTTTGGTAAGGGTAGTACAGTGATTGTGACAACTCGAGATGAGCAAGTGCTTAGGATTAACAGAGTCAGAAAGACATACAAGGTGAAAGAATTTAGTACTGATGAAGCACTTGAACTTTTCAAATTGAATGCCTTTAGTGGAAGTGGAAGTGATGAGGAAAAGGAGTACGATGAGATATCAAAATCAGTAGTTCATTATGCCAAAGGCAATCCATTAGTTGTTAAAGTTTTGGGTCATCTTCTTCATGGAAGAAATAAGGAAGAATGGGAAAGTCTGTTGGGCGATCTAAAAACAATGCCTCCAAGAGAAGTTTATGATGTAATGAAACTGAGTTATGATAGTCTAGATCGCAAAGGGCAACAAATTTTTCTAGATTTGGCATGTTTCTTTCTTAGAATGCTTGTGCCAGTGCAGGTTAGTGATCTGAAATGTTTATTGAAAGACAATGAAAGTGATAATTCAGTGGCTTTTGAGTTAAGAAGACTGGAAGACAAAGCTCTCATAACAATCTCTGAGGACAATACTGTATCCATGCATGATAGTTTACAAGAAATGGCTTGGGAGATTGTTCGTCAAGAGTCTGTTGAAGATCCTGGAAGTCGCAGTCGGTTGTGGGATCCCAATGACATCAATCAAGCTTTGGAAAATGAAAAGGTTGAAGACTGA


Promoter Sequence:
>Vu_08317::LG2:4670044-4672044(-)
TACAATGAATATGCGTTGATTGTTTGATAAATGTACCAAATCACACAAATAATATAAATGGTAAGTCCAAGTATCATTTTCTCATGATTTGTTTTAGTTTAGCTAATTATGATAATTTACTAATTTAGGCAATGAATATGAACATTGATTGATTTCCAACAAGTTAAAAACATATAAAGTTATAAAAATTTATCCGAGTAAAGACTCTCCAGGGTTGCATTTCATGAACAAAACTTTATGCAATTATCTACACAATATATTTTCAAAATAATCAAGCATTCACATCATAAACATACAAGTCACTAGCCCTTTAGATGACAAGTTCTAAATCATTATGTGAAAGTATTAATCATTTAGATATTCAAACACAAGATTTGCATTAAGAACAATGTTTAAAAAACTACACAGATAACATAGATTCCCATCATGCACGTGAATAATAAGAATAAAACATGATATTAATGAAGGACATTGTATTGCATAGAAAGAGTTACAAAAAGTTGATACATTACATCTAACCCCAATGATATAGGGTTTACCTACTCCTAGACATTTATTTTTGGTTTTCTCTCAACACTTTTATTGAGTCTTTAAAAAGTACATACTCGTTAGGCTAGCATCTTAAGGTGACAAAAAGTGTTGGCTCGTTGAGCGAGTTGCACCACTCACTGGACAAGTGGTCTTCTTTAGCTGACCGAGTGATTCTTTCTACCTTGGTGAGAGTCTTGTGGTTGGGTAGCAGCAACTTCTAATTCTTTTGCAATCTTTTATTTTGCTGCAAAATAAACACATATAGAAAATTATACTAATCTAAGAACAAATAAATACATATTTTACATCTTTCCCAAATTCAACACAAAATCACATTATAAAAAGGTTTTAATAAGTGTGAATAATAGGTAATTATGATAGTTATCAATATGTAATCAATCATTACATTAAAGTTTCAATCTCAATAGGAAAACATTTTGGGCAAGACAACTTCCAATTTTAACCCCATTGTTCAGTCTGGTCAGTTTGGCAACTCGACATCATTAAAAAAATTGAACTATCGTGTCGCAAAACTTCGTATTAACACAGCCCGAAAATCCAACCAAGGTCTGATACAGCTCGGCATAGACCTTTATAACCTGGCCCGGTCCGCTGTTGGATGGGTGGGCCGGCCTACCTATTTTCTTTTCTTTTTTGTCATCGAAAGTCTAATATCACATGTAAACAAGTTGAAAATTATATTTTTTTTACATGAAAACGGGTTAATGGTGGACTGTAGAGTTGATTCCGATCTGAAAAGGGTCAAAATCTTTCATATCTCAATTGAGATGTATCATACCTTAGTCGAGTTGTATCAATATAGGTGAGCTATATCAATATAGGTTGAGTGGTATTAGACCTTGGCTGACCTTGGCCAAACTGTGTTGAACCACGGGTTTGAATTTTTTTTTAATGAAGCCTAGCTACCAGGCTGGCTCGACTGACCTGTGGGATTGGCTTGTTGGTGATCGATCACAAGAACACAACAATCAATTAGCAACTGTATTTTCGAAATTGAAAGTCACAGTGCCTCAAAAACAACTTTTTATTGAAATTTTTTACATCAAAAGTCGAGCAAAAGTCATATGGGATGCACAATTTATTCATTTAAAGTCGTGGGACTACATAACTTGCCTATTAATGTTTTCAAATTTGCCTAATTTTGTAATTACTATACAAAATTTCCAAATTTTCCTAGATAGGTAAACAAACCTAAAATCTTAGAAAAAGAAGGATGTGAACTGATGATAGAAGCTATTAAACAATGCAACTTGATTTAAAATAATTCCATTTGCAAGCTCTATACGATGTTGCCGAGAAACCTCCAACTTGATAAGTCTATTTAAGCCACCTTAATCAAAACCATTCTCTTCAGTTATCTCTTTGTTCATTCTTTATTTCTCACCTGTGTTGTTTTTCTTTGTGTTCTGGTTATTATTTCAAAAACAGAAAGGTGAAGAGGAGCAACC


Gene Sequence:
>Vu_08317(-)
ATGTCAGCCAGCAATGTTCCTGAAATAAAGTACGATGTTTTTGTCAGCTTTAGAGGCAAGGAAATCCGTGACGGATTTCTTAGCCATCTGACTGAGGCATTTGACATGAAGAAAATAAATGGCTTTGTAGATGATAAACTTGAGAGGGGAGAAGAAATATGGCCATCACTTGTTGCAGCTATTGAAAGATCAGCCATTTCGTTGATCATCTTCTCACCAGACTATGCTTCTTCTCGTTGGTGTTTAGAAGAAGTTCTGAAAATAGTTGAATGTAAAGAGAAATATGAACGGATTGTAATTCCGGTTTTCTACAAAGTGGCACCAACAGCTGTAAGACATCAATCTGGAAGTTACGAAAATGCATTTGCTAACCATCGACTAAACTATACCAGACAGGTGCAAATGTGGAAAGATGCTTTGAAAAAATCTGCTGATTTATCTGGAATTGAATCGTCCAAATTTAGGTAAGCTCTTTTTTTCCATAGTTGTTCCCTGGTTGTTTTTGTAGCTATATGCATGTTGTTATAATAACATATTTCTTAAATTGCAAAATCCAGTGCTGCATGTTTGAACGAACATTATATATGGAAAATTCCCTTAATTCATTTGCGAACAACATATAGATAATAATTTCACAGCCAAACATGAAGCTTGTATATATGGGTCACACACTAGCTAGCTAGTAATTGAACCAATAAACGACATCGATTTTAACACACACTTCGTGTCTCTTTGTGTCGTATAGAAATGATGCTGAGGTGGTTAAAGAAATTGTCGATCTTGTGGTGAAGAGGTTGGATAAACCCCAAGTTAACCCAAAAGGACTTGTTGGAATCGATGAAAAAATTGCTACTTTGGAATCATGGATAAGTGATGAACCAAAAGCCACTCAACTCGTTGGAATTTGGGGTATGGGGGGTATTGGTAAGACAACCCTTGCAGAAGTGGTATTTCATAGACTACGATCTCAATATCAAGAATCTTACTTCTTAGCCAATGAAAGAGACCAATCAAAAAAACATGGATTAATTCATTTGAAGAAAATTATGTTTTCTAAGCTGTTAGGACATGAAGTGGATATTGACACTCCAAATTACTTGCCTGAAAACATTGTTAGGAGAATTGGTTGTATGAAGGTTCTTGTTGTTCTTGACGATGTGAATGATTCAGATCACATAGAAAAACTGGTGGGAACTCTTGAAAATTTTGGTAAGGGTAGTACAGTGATTGTGACAACTCGAGATGAGCAAGTGCTTAGGATTAACAGAGTCAGAAAGACATACAAGGTGAAAGAATTTAGTACTGATGAAGCACTTGAACTTTTCAAATTGAATGCCTTTAGTGGAAGTGGAAGTGATGAGGAAAAGGAGTACGATGAGATATCAAAATCAGTAGTTCATTATGCCAAAGGCAATCCATTAGTTGTTAAAGTTTTGGGTCATCTTCTTCATGGAAGAAATAAGGAAGAATGGGAAAGTCTGTTGGGCGATCTAAAAACAATGCCTCCAAGAGAAGTTTATGATGTAATGAAACTGAGTTATGATAGTCTAGATCGCAAAGGGCAACAAATTTTTCTAGATTTGGCATGTTTCTTTCTTAGAATGCTTGTGCCAGTGCAGGTTAGTGATCTGAAATGTTTATTGAAAGACAATGAAAGTGATAATTCAGTGGCTTTTGAGTTAAGAAGACTGGAAGACAAAGCTCTCATAACAATCTCTGAGGACAATACTGTATCCATGCATGATAGTTTACAAGAAATGGCTTGGGAGATTGTTCGTCAAGAGTCTGTTGAAGATCCTGGAAGTCGCAGTCGGTTGTGGGATCCCAATGACATCAATCAAGCTTTGGAAAATGAAAAGGTTGAAGACTGA