Genomic Resources - Ricebean Portal

Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

Gene Details:

Gene ID	Chr. No.	Start Position	End Position	Function	View on
Vu_08270	LG2	4151753	4152172	PREDICTED: ethylene-responsive transcription factor ERF098-like	Map

Annotations

category		relationship type		keyword

SNP	Position	Effect	Amino acid change
G/T,*	4151804	missense_variant	p.Gly18Trp
A/T	4151808	missense_variant	p.Glu19Val
G/A	4151962	synonymous_variant	p.Leu70Leu
T/G	4152037	synonymous_variant	p.Ser95Ser
G/T	4152053	missense_variant	p.Ala101Ser
T/C	4152063	missense_variant	p.Ile104Thr

View accession wise SNPs

Sequence Details:

Protein Sequence:
>Vu_08270.1

MEDPREGEKEKEKKEKGGEEGRYRGVRRRPWGKFGAEIRDPTKPTGRQWLGTFDTAEAAARAYDRAAIELRGALAILNFPDEYHSHLPFLSSSSSSSSSSASVIGSSSTAQGEVIEFEYLDDKVLEDLLESEEKRKKKE*

CDS Sequence:
>Vu_08270.1

ATGGAGGATCCACGTGAAGGGGAGAAAGAGAAGGAGAAGAAGGAGAAAGGAGGGGAAGAAGGGAGGTACCGTGGTGTGAGAAGGAGGCCATGGGGTAAATTTGGAGCAGAGATCAGAGACCCAACAAAACCTACGGGAAGACAATGGTTGGGGACATTTGACACAGCAGAAGCAGCAGCAAGAGCATATGATCGAGCAGCCATAGAATTGAGGGGTGCTCTTGCAATCCTTAATTTCCCTGATGAGTACCATTCTCATCTCCCTTTCTTGTCATCATCATCGTCTTCTTCTTCTTCTTCTGCCAGTGTCATTGGAAGTTCTTCTACTGCACAAGGTGAAGTTATTGAGTTTGAGTATTTGGATGACAAGGTATTGGAAGACCTTCTTGAGTCAGAGGAGAAGCGAAAGAAGAAAGAGTAA

Promoter Sequence:
>Vu_08270::LG2:4149753-4151753(+)

AATACTAAACAAGTTTGTAAGTCACTAAAAAATAATTTTATAAAAGTAAAATCAAGCACTAAAAAAATACTATAACAAATAAATAAAAGTTTAGATTAGCACGTCCTCACATCTTTTGATTTGATGTAATGAGGATAAAGTTCTCCAAATCTGTTCCTTAATTATTTATTAATGTTACATGGATAACTAAGTTCAAGTTGCAATAATTTACTTTATGCTCTCCCAGATATTTGGTTTTCTTCCCATAACCGACTAATACTACGTAGAATTAATGATGAATTGCACTTTTCTATATTTGAACATCTTTAAATATAATTATTTATCTTGGTTGAGTTAGTGAAAGGATATCATTAATATTCTTGATAAGTGGGTTTGTATATCAAAGAGACATTACCCTTTCGATTTCTGAGTGTTGTTGTGAAACTCTGCAAAGTTGACCTGATTTTGAAAAGTTTTGAAAGAGACTTATAACAAAGGTCATCAAAGCCCTCTCATAACTTGGGCTTCTTCTCCCCTTTGAGCTAGGAAATGTTTTCTTTCTACACCTCCTTAAATTCAGCATACACCTCCCTAAATTCTTTTATTTTCCAAATTTTATAATTAAGAATGTAAATTTGGTATTTTAAGAAGTACGATCCGAATAAATTTTTTAGTTTATATTTTGGAATGTTGAATATAAAATTTGTTTATTTATATTCATAATACCATAATTTTAAATATATATATATTTTTAAATTATGTACTTTAAAATAAATTTTTATTTGGTTATCTAATGGTGTAAATTTGCATATCTTTTTGCCTAAGTACTAATCACTTTTCCTTCATTTATGTTTTTTTTCTTCTTTCGTTAAACTCACAACGATAGCATTCTGTGATAATAATATTATAAGTGAATAAATTTAAATAAAACTAGTTGTCACCATCATCATCATATGTTGCTATAAAAGGATGAGGTTTGATTTTCATTGGAGGAGGTTGTATTAATGCTTGTTAAGTTATTACTTCTCTACCTAACCAGAAAGATACTAGATGAATAGCACATATCTCAACATTAGCAAGAAAGTGACACCTTCAATACTAGCACCAAACAGGGTTTTGCCCATTGATTCATCTACCAAAAAGGAAAAATTAAAGGCGTCTTATTCTAACCAAAAGAAGATTAATGTAGAATGAAAAGAATGTTTTACTCGAGAAACAAATAATAAAAGGAATCTAATTATTGCAATATAAGTCAATTCAGTAAAAACCCAACCATGTATTAACATGCATGTTCATTGTTCTTAGCAAATTTGAATTAGGTCACAGTTAATTAATTTAATAATCAATTCATGACGCGCATTAAGCTAAAAATTGTCACCCCACATAAGCCTAATAGAAAAAGTGCACTGAACTTTTCACGTTAAAGTCACGGTCCATGTACAGCATATATAACATAATCGTCTTTACCCTGTTCAAATGGTCTTGTTTCGGTCAACTTGTCTTAATGTTTTCTTTTCAGAAGTAATAATACGCTTACAACAGTGTAATTTTATACAATTATCTTACAATTCTTTTTATTAAGTAGCTTAATTTATATTTTTATTTTATTATTGAAACAAGTTGTCGTTCAGTTATTTACTAAAAAAAGGTAGTTTTCATAATATTGTTGTTCTTCCCTCGGTATAAGTCGATGAATCGAACTTTTACACTTCATCGCGAAAGATTCTAAGAACGTGACAGAATACTATTCAGGACGCTGGCTATATATGGATGCGTCAATGCATATGGCATAGGCATAACTGACCCTACAGATACAAAAGTCGTAATAGAAGAAAACAAGGTTTTGATAAGCAAACAGATTGTGACGTATAAGTTCCAGCAAAAAGACTGGTCTCACAGCATACTGAACAACGTTTGAGTTTCCGTTAAAAGAGGAATTCATAGCGAATATCCAATTGTGTCTGGATTAAGATTGTTTCTGTTACCTGGGAAAAGCCGAAGAAGAAGAGGTAATAACAACA

Gene Sequence:

>Vu_08270(+)