Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_08086 LG2 2705945 2708331 PREDICTED: probably inactive receptor-like protein kinase At2g46850
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   protein phosphorylation, cell surface receptor signaling pathway, protein phosphorylation, protein phosphorylation
Cellular Component   is active in   plasma membrane
Cellular Component   located in   chloroplast
Molecular Function   enables   protein kinase activity, protein kinase activity, polysaccharide binding, protein kinase activity
SNP Position Effect Amino acid change
T/A 2706026 missense_variant p.Thr607Ser
C/T 2706027 synonymous_variant p.Arg606Arg
G/A 2706132 synonymous_variant p.His571His
T/A 2706417 missense_variant p.Leu476Phe
T/C 2706488 missense_variant p.Thr453Ala
C/T 2706716 missense_variant p.Asp377Asn
T/A 2707022 upstream_gene_variant
A/C 2707047 upstream_gene_variant
C/T 2707048 upstream_gene_variant
A/G 2707062 upstream_gene_variant
A/T 2707082 upstream_gene_variant
A/C 2707188 upstream_gene_variant
T/C 2707221 upstream_gene_variant
C/A 2707336 missense_variant p.Arg256Leu
G/A 2707350 splice_acceptor_variant&intron_variant
T/C 2707413 upstream_gene_variant
A/T 2707437 upstream_gene_variant
G/T 2707440 upstream_gene_variant
T/C 2707490 upstream_gene_variant
G/T 2707840 synonymous_variant p.Thr164Thr
G/A 2707900 synonymous_variant p.Pro144Pro
G/T 2707901 missense_variant p.Pro144His
G/A 2708167 synonymous_variant p.Thr55Thr
C/T 2708216 missense_variant p.Arg39His
C/A 2708254 missense_variant p.Leu26Phe
G/A 2708298 missense_variant p.Leu12Phe

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_08086.1
MSPILLLTFLLLLLCFPFSSSLQPSLPPNSCTQTCGDLRLPFPFYVNSSCQSISTAFHLSCTNSSTLFLRIGSVSYKVLEFFPDGLLVDFPGSSSCRQYNDLNSFDRSFAGKDNFGVSVDNVIGLYDCEDSSLCKADCETIDLPGCDGRGGGSLACCYPLSDHTVWHVGYGFSVFSQFGCRGVSSWAVLRGSTWGKRGVKLEWALPRNSSDQVCARNADMINATSIEGGVRCACQNGYIGDGFANGTGCLQACIKDGKEAYGSDCNIKRQDQRKFVIIAGIIGPVLIVASLVALFYLLKRPAKPGMFDTEQAYYQNISIPKACKTRLFSLHELEEATKGFEEVKKLMHANNGTIFAGVLRDGSHIAVHKLQCEKKDLIQVLSQIEVLSSTVHRNMARILGCCIESGNTLVVYEFPSNGTLEEHLHQSKGQQLRLDWYRRLTIAAETASILAFLHYENSPPIFHHNLKSACIFLDDDYSVKIAGFGLLNSNFYYGSHLHKNHEGFGICKNDVYDMGVLLLEIISGSNRLDLPSSALQHIRAGKFEEIFDPFLCYDEQPQYRQEQMQIIADLATRCLLFGVDGRLGMVDVVRELVHLTKESLDGGISKGPALEETFSNSSLLQMISMSPDSMNVP*


CDS Sequence:
>Vu_08086.1
ATGTCACCTATTCTTCTCCTCACTTTTCTTCTACTTCTTCTGTGCTTCCCATTTTCTTCTTCCTTACAACCCTCTTTGCCTCCAAACTCCTGCACTCAAACATGCGGGGACCTCCGTCTTCCTTTTCCATTCTATGTCAACTCTTCTTGTCAGTCGATTTCCACCGCTTTCCATCTCTCCTGCACGAATTCATCTACCCTTTTCCTCAGAATTGGCTCGGTGAGCTACAAAGTCTTGGAATTCTTCCCGGATGGCCTGCTGGTGGACTTTCCTGGCTCATCATCCTGTAGACAGTACAATGACTTGAATTCTTTTGACAGAAGCTTTGCAGGGAAGGACAACTTTGGAGTTTCGGTGGACAATGTTATTGGTCTCTATGACTGTGAGGATTCCTCTCTCTGCAAAGCAGATTGTGAAACTATTGACTTGCCCGGTTGTGATGGAAGGGGTGGAGGCTCCCTTGCCTGCTGCTATCCACTCTCCGACCATACCGTATGGCATGTTGGATATGGGTTTTCGGTGTTTTCTCAGTTTGGATGCAGGGGGGTTTCTAGTTGGGCCGTTTTGCGAGGCTCAACTTGGGGAAAACGGGGGGTCAAGTTGGAATGGGCACTGCCCAGAAACTCCTCTGACCAAGTTTGTGCAAGGAATGCTGACATGATCAATGCTACATCAATCGAAGGAGGAGTGAGATGTGCCTGTCAAAATGGATATATCGGTGATGGTTTTGCTAATGGAACTGGATGTTTGCAGGCTTGCATAAAGGACGGAAAGGAAGCATATGGAAGTGACTGCAACATCAAAAGACAAGATCAGAGGAAATTTGTTATCATTGCCGGAATCATTGGCCCAGTTCTGATCGTTGCCTCCCTGGTTGCTCTATTTTATCTTCTTAAAAGGCCAGCAAAACCGGGGATGTTTGACACGGAGCAGGCTTACTATCAAAACATTTCAATCCCCAAAGCTTGTAAAACTCGACTGTTCAGCCTCCACGAGCTAGAGGAAGCCACTAAAGGTTTTGAAGAGGTTAAAAAACTTATGCATGCCAATAATGGGACAATTTTCGCTGGAGTTTTGAGGGATGGATCTCACATAGCTGTCCACAAATTACAATGTGAGAAGAAAGACTTGATTCAAGTTCTGTCACAGATCGAAGTTCTGTCCTCTACTGTGCATAGAAACATGGCCCGCATTCTTGGTTGCTGTATTGAATCTGGCAACACTCTAGTAGTTTATGAGTTTCCTTCCAATGGTACTCTGGAGGAACATTTACATCAAAGCAAAGGACAACAACTACGTTTAGATTGGTACAGGAGATTGACTATCGCTGCAGAAACAGCTAGCATTCTTGCATTCCTACACTACGAGAACTCTCCTCCCATATTTCACCATAACCTTAAATCTGCATGCATCTTCCTTGATGATGATTATTCTGTCAAGATTGCAGGATTTGGTCTGCTCAACTCCAATTTTTACTATGGTTCTCACTTACACAAGAACCACGAAGGCTTTGGCATCTGCAAAAATGATGTCTATGACATGGGTGTGTTGCTTCTTGAAATCATCTCAGGCTCAAATCGCTTGGATTTACCAAGTTCAGCCTTGCAGCATATAAGGGCTGGAAAATTTGAAGAAATTTTTGACCCTTTTCTTTGCTATGATGAACAACCACAGTATCGGCAAGAGCAAATGCAGATCATTGCTGATCTTGCCACAAGATGCCTCTTATTTGGTGTTGATGGAAGGTTGGGAATGGTTGATGTTGTGAGGGAGTTAGTACACTTGACTAAAGAAAGTCTTGATGGAGGAATTAGCAAAGGACCTGCACTGGAAGAGACATTCTCAAATTCAAGCCTTCTTCAGATGATATCAATGTCTCCTGATTCTATGAATGTCCCTTGA


Promoter Sequence:
>Vu_08086::LG2:2708331-2710331(-)
TTAGAAAAGTCAAAATATCTATGATCATATGATCAAATACTCCAACATAAAATTGAAATAAACTTAAAAGTTACATAATCCATTCAAAAAATGATTGGAATTAAATAGACACAAATTTATTTAACGCAAATTTAATGACGTTTTGAAATTATTATCACCAAGACATCACCCTAAAGCAAGTTGGAATCCTATGTTATCCATTGATTTAATTAATTGTGAGAAGAAATTCAATCGTTCCACCTCATCATGTTGGAGTTCTTATGGTCCAACGTCTCCATACAAACTTTCCGTTTTTCTTTTCTTTATATGAATTTGAAGTTTAATATAATCTTATTAAATTATTTCGTAAAATGAAATATTCATTTATTTATATATATATTTGTAAATTATCCTCGATACATCCTTTATATATATTTCAAATGTGAGGTTAAACATTTATTAATATTTTAATAATAATCAAATAAATTTAATAAATAACAAATTTTATAAAAATATTTTAATTGTGTTAAAAAAAAATCTTAAATCTAATTCAATCTTATAACATGATTATAATATCACAATAGAAAAATAATTTTAAACATAACTCAATCTTATAAAATAAATCTTATTTTTCATCCAACTAAATCTTATCACAGTATACAAATATCTTATTTCTAATTTACGTAAATTTTATCACATTATGAAAATATATAAGTTTATTATACCGGAAAATTAAATATTAGTACGGAATATATTACTATACCTATATATTCTTATTATTATTATTTACTCTTTGTTTACCCTGGTTAAAAAATCGGGATCATTTTCACTCGATTTACACGTCTAAAAGAAAGAACAAGAAACCCATTGCTTCTCACCTAACACTCCAAGGGAACCTTAATCACTGCTACTTTTTTCGGCTTCATATAGAAAGATTTGTGCCGGTTAATACGGTGGAAAAAAAAACAAAACAACATAATTATGTGTTGACAATTAGATGTTTGAAAATAATTACATGTTGTGAAAAGGATGTAACCAACACGAGGTGCTGTTTTGAGTCACTATAATTCATTCTGTATAGCCAAAAAAAATAGAATGTAATCTGAGTTATGTACGTAAAGAGCAATGCTTAACTATTTATTCTAGTTACCTAGCATTACATTTAACACAGTGTGATGAGTTTAGGTTAGGTTAAGGTTTATGTGGGTCCCCAACAACATTAATTATTTATCTTTTTCTCTTTTTGTAAGGTACGCATCCATATTCCTTTCCATACATTCATTGTTCACAGATCTAATTCACTGACATTCCGTGATCCTTAAACCATGTTCTTCTAAATTTTATTTTATCATACACACACACACACACAAACGCACGTATAAGCAATCGCTACTTTGACAAAAACAGTTACCTCTGCTTTCAATTTCAATTCATACATATTTTAATATGTATAGCCCTTCAATTAATATAGTACTACTTTCATTAAATTTCTCCTTCAAAAAAATAAAACTGAACTTATAACTTTCATTATTTTTTTTACTAAAATCATGAAATCAAATATATTAACGTATGTATACATATAGGTGTAGGAAATAAGATACATGGGTGTGTGTATGTATATAGTATATTGATTATTGGTGTGAGTTTGTGCAAGAAATCTCGATTCCCATGCAAGATCACAATAGTCTATGCTACGTAATTAAGCTTTGTGCAATTCAACAAGATTGAAATGCTCACAAGCTTGGCCACGCTCGCTCAGCACAAGCTCCAATGTATTATTCTGATACGAAGTGTGCCCCATTCCTCAGACCAATCGTCTCCTCCTTCTCCAACTTCTATGCCTCCTTCACACTACCCATTACCTCCCTGATTTCGCCACGTCTTCTTCTTCATCTTCATCTCTCTCTCATTCCATCAATCATTCACTTTTACAACATACATACATACACACACTACACTCATATTCATTAAATTACAGACCAACTACACTTTCACTCCACTCACTTCTTTTCTTCCTTACA


Gene Sequence:
>Vu_08086(-)
ATGTCACCTATTCTTCTCCTCACTTTTCTTCTACTTCTTCTGTGCTTCCCATTTTCTTCTTCCTTACAACCCTCTTTGCCTCCAAACTCCTGCACTCAAACATGCGGGGACCTCCGTCTTCCTTTTCCATTCTATGTCAACTCTTCTTGTCAGTCGATTTCCACCGCTTTCCATCTCTCCTGCACGAATTCATCTACCCTTTTCCTCAGAATTGGCTCGGTGAGCTACAAAGTCTTGGAATTCTTCCCGGATGGCCTGCTGGTGGACTTTCCTGGCTCATCATCCTGTAGACAGTACAATGACTTGAATTCTTTTGACAGAAGCTTTGCAGGGAAGGACAACTTTGGAGTTTCGGTGGACAATGTTATTGGTCTCTATGACTGTGAGGATTCCTCTCTCTGCAAAGCAGATTGTGAAACTATTGACTTGCCCGGTTGTGATGGAAGGGGTGGAGGCTCCCTTGCCTGCTGCTATCCACTCTCCGACCATACCGTATGGCATGTTGGATATGGGTTTTCGGTGTTTTCTCAGTTTGGATGCAGGGGGGTTTCTAGTTGGGCCGTTTTGCGAGGCTCAACTTGGGGAAAACGGGGGGTCAAGTTGGAATGGGCACTGCCCAGAAACTCCTCTGACCAAGTTTGTGCAAGGAATGCTGACATGATCAATGCTACATCAATCGAAGGAGGAGTGAGATGTGCCTGTCAAAATGGATATATCGGTGATGGTTTTGCTAATGGAACTGGATGTTTGCAGGGTGAGTAGTTTTCATCATAACCGGGTTAAAATATATTACTTGTTTTAATGCCATTACATATTTGCAATTACGTCGTTTGTGCGTTATAATTTGTGAAAGAAAGTGTGATGCACGGAAGGGTGTGGTAGAAATTGTCCCAGTAATATCCCTTTTCTTCCGTAAATAGATTGTTAACCTTGTATACGTTTAAGTATGACATTTGCTTATGGTTGATGTATTCCTGTTAGCTTGCATAAAGGACGGAAAGGAAGCATATGGAAGTGACTGCAACATCAAAAGACAAGATCAGAGGAAATTTGTTATCATTGCCGGTACGTAATAGAGAACGGTAATATTCATATAAAACTTAATTTCCTAAAGTCTCGAGTGTGCCAACTCAAAAATTACTATACAACACATTCAACAAATTGTGCAGAGGTCACAACAAGGATTCATGACTACCAGATGCTTTCAATTCTTCACCGTTTTCCTTAAGCTATATATGTAATCTGGTAGTCGTGGTCAGTTATATTATATACTTATATTTCTTGTGTCAATCAATCTAAGAGCATTCTAAACTCAACATGCAGGAATCATTGGCCCAGTTCTGATCGTTGCCTCCCTGGTTGCTCTATTTTATCTTCTTAAAAGGCCAGCAAAACCGGGGATGTTTGACACGGAGCAGGCTTACTATCAAAACATTTCAATCCCCAAAGCTTGTAAAACTCGACTGTTCAGCCTCCACGAGCTAGAGGAAGCCACTAAAGGTTTTGAAGAGGTTAAAAAACTTATGCATGCCAATAATGGGACAATTTTCGCTGGAGTTTTGAGGGATGGATCTCACATAGCTGTCCACAAATTACAATGTGAGAAGAAAGACTTGATTCAAGTTCTGTCACAGATCGAAGTTCTGTCCTCTACTGTGCATAGAAACATGGCCCGCATTCTTGGTTGCTGTATTGAATCTGGCAACACTCTAGTAGTTTATGAGTTTCCTTCCAATGGTACTCTGGAGGAACATTTACATCAAAGCAAAGGACAACAACTACGTTTAGATTGGTACAGGAGATTGACTATCGCTGCAGAAACAGCTAGCATTCTTGCATTCCTACACTACGAGAACTCTCCTCCCATATTTCACCATAACCTTAAATCTGCATGCATCTTCCTTGATGATGATTATTCTGTCAAGATTGCAGGATTTGGTCTGCTCAACTCCAATTTTTACTATGGTTCTCACTTACACAAGAACCACGAAGGCTTTGGCATCTGCAAAAATGATGTCTATGACATGGGTGTGTTGCTTCTTGAAATCATCTCAGGCTCAAATCGCTTGGATTTACCAAGTTCAGCCTTGCAGCATATAAGGGCTGGAAAATTTGAAGAAATTTTTGACCCTTTTCTTTGCTATGATGAACAACCACAGTATCGGCAAGAGCAAATGCAGATCATTGCTGATCTTGCCACAAGATGCCTCTTATTTGGTGTTGATGGAAGGTTGGGAATGGTTGATGTTGTGAGGGAGTTAGTACACTTGACTAAAGAAAGTCTTGATGGAGGAATTAGCAAAGGACCTGCACTGGAAGAGACATTCTCAAATTCAAGCCTTCTTCAGATGATATCAATGTCTCCTGATTCTATGAATGTCCCTTGA