Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_07816 LG1 109126679 109128678 PREDICTED: serine/threonine-protein kinase HT1 isoform X2
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Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/T 109126717 missense_variant p.Cys375Ser
A/T 109126726 missense_variant p.Leu372Ile
A/G 109126850 synonymous_variant p.Pro330Pro
C/T 109126856 synonymous_variant p.Ala328Ala
C/T 109126859 synonymous_variant p.Ser327Ser
C/T 109126986 intron_variant
G/C 109126988 intron_variant
T/C 109126989 intron_variant
G/A 109127006 intron_variant
C/T 109127086 intron_variant
T/A 109127101 intron_variant
G/T 109127106 intron_variant
T/A 109127114 intron_variant
C/T 109127275 intron_variant
T/A 109127328 intron_variant
T/A 109127368 intron_variant
G/A 109127643 synonymous_variant p.Tyr253Tyr
C/T 109127676 synonymous_variant p.Arg242Arg
T/A 109127886 missense_variant p.Gln172His
A/T 109128107 intron_variant
T/C,* 109128125 intron_variant
G/A 109128127 intron_variant
T/A 109128292 missense_variant p.Leu129Phe
C/A 109128297 missense_variant p.Ala128Ser
T/C 109128307 synonymous_variant p.Lys124Lys
C/T 109128601 synonymous_variant p.Ser26Ser

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_07816.1
MGGSCFHALRLRRFKSKPLPEPSSSSRARLDSDLENMERRRFDSLESWSMILDSENVETWEASKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPTQDEERRGLLEQQFKSEVALLSRLFHPNIVQVIKLLKLYSTQTFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETILRLALDISRGMEYLHSQGVIHRDLKSNNLLLNDEMRVKVADFGTSCLETRCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKNERPPLPASCQPALAHLIKRCWSANPSKRPDFSDIVCTLEKYDECVKEGLPLTHHSGLVSKNIIIERLKGCVSMSSSIPVQA*


CDS Sequence:
>Vu_07816.1
ATGGGAGGCTCATGTTTCCATGCGCTTCGTTTGAGGAGGTTCAAGAGTAAGCCTCTGCCAGAACCCTCTTCTTCTTCGAGGGCACGGTTGGATTCTGACTTGGAGAACATGGAGAGAAGAAGGTTTGACAGCTTGGAATCATGGTCCATGATATTGGACTCTGAGAATGTGGAGACATGGGAAGCATCAAAGGAGGATCAAGAAGAATGGACTGCTGATCTTTCCCAACTTTTCATAGGTAACAAGTTTGCTTCCGGTGCTCACAGTAGGATTTACCGTGGAATTTACAAGCAGAGAGCTGTTGCTGTAAAAATGGTGAGGATTCCCACACAGGACGAGGAGAGAAGAGGCTTGCTCGAACAGCAATTCAAATCAGAAGTTGCTTTACTTTCACGTCTCTTTCACCCTAACATAGTGCAGGTCATTAAGCTCTTAAAACTCTACAGCACTCAAACTTTTATTGCAGCTTGTAAAAAACCGCCAGTGTACTGTATCATAACAGAATACATGTCACAAGGAACTCTGAGGATGTATCTAAACAAGAAAGAACCATACTCTCTTTCCACAGAAACCATACTACGGTTAGCTCTTGACATATCAAGGGGCATGGAGTACCTTCATTCGCAAGGTGTGATCCACAGAGACCTAAAGTCAAATAACTTGCTTCTCAACGATGAGATGAGGGTTAAGGTGGCAGACTTTGGAACATCGTGTCTCGAAACACGGTGTCGGGAGACCAAGGGAAACATGGGAACATACCGTTGGATGGCCCCTGAGATGATTAAGGAAAAACCGTACACTCGTAAAGTTGATGTCTACAGCTTTGGAATTGTGCTCTGGGAGCTCACCACTGCTCTACTTCCATTCCAGGGAATGACCCCTGTTCAAGCTGCTTTTGCTGTTGCTGAGAAGAACGAAAGGCCTCCACTTCCTGCTAGTTGCCAACCAGCGCTTGCCCATCTGATAAAACGTTGTTGGTCGGCGAACCCTTCAAAGAGGCCAGATTTCAGTGACATTGTGTGCACTCTGGAGAAGTACGATGAGTGCGTGAAGGAGGGTCTTCCTCTGACTCATCATTCAGGCCTTGTCAGCAAAAACATCATCATCGAACGCTTAAAAGGTTGCGTCTCTATGAGCTCTTCCATACCTGTACAGGCTTGA


Promoter Sequence:
>Vu_07816::LG1:109128678-109130678(-)
ATTCATTTTTCATTAAGAGAGGATTCCTTCACTTATCTATATATTAGATTGTGGCATCTCTAATTATGGTTTTGATCAAAGATGACAATCTTTATGACAAATTTTCACTGACTTATCAATCTATTAGATTGTGGCACATCCATCTCTATCTTATTATGCACTCTTTTTTAATTTATTTTTTATTTATGTCTCGTGAGAATTTGAATTCAAAACGGTCATATTTTTTCCTATACGAATAATATCATTTGACACCATAACATATCATTTTGGTATCCAAATGATATCAATTGGACTTCTCCCCATTCATACGAAAAGTTGTAGAAGTAAATTAAGTTAAAAACCTATTTTTTTCTAATTCATAGATAAGAAAAATAACTCTAAAAATATTATAAATAAATTAAGTTAAAAAAATATTTATATAAAAAGTTAACATTTTTTATTTAAGATTATTATAGAAAAGTTGAAAGAATATTCACAATAAAATCTACATTTCAGTGAAGTTAATTCTTGATTTCTAGTATTATACGTTTTGAAGTATAAAGATTGTTATAATTTTGTTTGTTTTCACAAAATAAGAAAGTAAGCTGTATTTAAATCGTTTATAGTTTTGATTCCTAAGTAAGACTATTTAAGTGCAATGGAAAAATTAACTAACCGGTATAGCGAAAAGGTAAAAAAAAACTCATGATTGATAGTGGTAGTTGTTTTGGAATCAAACTATTGAGAGGGATTGGAACGAAGCATTGGTATTTTCTGTTCCTTAATATTTCATCTTTATATATTTATAAAATATGTCTTCTCATTCACACACCTTTCACTTTTTATTTAAAAGGTATGATTCCACACTTCCCTTCCTTTGCAAAAATTCAATCCAATGCTTGGTTTAGAATATTACAAGCTAAGATGATCCACAATTGAAATGCTTAAAGAAGTCATCAAGTTGCATCAATCTAATCAATCTATTGAATTGACAATCCCAGATGGAATACACATATAGTTCATGCAAATCCAAATAAAAATCCCTCAGTTAAGGTATTTCTGTACCTTTGAGTACATTTTTTGTGTGGGAAGAAGGAAAGATAAACTAAGAGTTGAATGATGCGTGGCATTTGGATCAAAGGGTTCTTGACTTGGCTCTTGTGTGCGCTTTAATCTTTATCTTTTTGGCAAGATTAGGTGCCACATGTACATGCATTGAAGGAGCTTTTTGGTGCTAACAATTTGGTGCTACAGTTAAAGGATGCTAACATGGGACATATCTCAAACGATTAGCAGAATGAAAAGTACAAAATTGTTGGATGAGCAAAACGCAAAGCTGAAATCTACCATGCTTTGCACTGTGGCCACTTATCATTGATGATGTGATGATGCATGCAAGAAAAGAAACGCGAACAGAAGCAAGGTAGCTCAATTAAATTAAAATCGAGCAAAAAGTCTCTCTTTCTTTCTCTCTCTCTGGCTCCACTTTTGAACCAAGCACTCACGAGACACCCTTGAAGCTTCACCCTTTGAATTCATCTTTATGGTGCTACACGACCTAATCCTCCTGACCCGTCCTATTACCAGAAACAAACCGTGAAAACTGCTTCTTCTCTTCTATTCTCATCTCTATCTCCTTACAATTTCCATCTTCATCAACGTCCCCTGCAATTAATTACTTCCAATTCCTACGTTTCTGTTGCAGAAATTTCACCCTTCACAGCTTTCGATTGATAAACCAAGTGTGGCAAGTGCTTGATATGAGCACTTCTTCGTTTTCCTCTCTTGCAAGTCAAAAGGGTCTTCTCTGAATTCGTAAATGAGTCATTTTGACTCGTATTCTTCTTATTGTTCTTCATTTTGTGTTGGAGCCTATGTTTCGGAATCGGTTTATGCACTTCCTGAAATCGGTTCACACGTTCAGAAGAAAATCTCCTTTTGACAGTTTGTTTTGACAAGGAAAGAAGGCATCAGTCACTGCACGTATTTGTTTCAGAGGCATGAACTTTGGCAGAGCATCA


Gene Sequence:
>Vu_07816(-)
ATGGGAGGCTCATGTTTCCATGCGCTTCGTTTGAGGAGGTTCAAGAGTAAGCCTCTGCCAGAACCCTCTTCTTCTTCGAGGGCACGGTTGGATTCTGACTTGGAGAACATGGAGAGAAGAAGGTTTGACAGCTTGGAATCATGGTCCATGATATTGGACTCTGAGAATGTGGAGACATGGGAAGCATCAAAGGAGGATCAAGAAGAATGGACTGCTGATCTTTCCCAACTTTTCATAGGTAACAAGTTTGCTTCCGGTGCTCACAGTAGGATTTACCGTGGAATTTACAAGCAGAGAGCTGTTGCTGTAAAAATGGTGAGGATTCCCACACAGGACGAGGAGAGAAGAGGCTTGCTCGAACAGCAATTCAAATCAGAAGTTGCTTTACTTTCACGTCTCTTTCACCCTAACATAGTGCAGGTCATTAAGCTCTTAAAACTCTACAGCACTCAAACTGTTAGTCTGTGAACATAAACATACCTTCTTGTCCTCATGTTTTTGTTTGTTTAGCTTTATGAGTTTTTGTTTCTGTCGGATTTCGAATTCAAGGACAACACTGTTGAACTGTTTTTGACTTCAAAGTTCTACCGCATACTCAAAACAACTGATAGATAATCATGTTCTATGCAATCTCATCTTTGTATGCATAAAAAAAGAGTAATTATTTTCTTTCTTTTTATGAGTGAGATTTTGAAGATGGAGGGGTGACTAATAAAGGTGTATTAATTTACAGTTTATTGCAGCTTGTAAAAAACCGCCAGTGTACTGTATCATAACAGAATACATGTCACAAGGAACTCTGAGGATGTATCTAAACAAGAAAGAACCATACTCTCTTTCCACAGAAACCATACTACGGTTAGCTCTTGACATATCAAGGGGCATGGAGTACCTTCATTCGCAAGGTGTGATCCACAGAGACCTAAAGTCAAATAACTTGCTTCTCAACGATGAGATGAGGGTTAAGGTGGCAGACTTTGGAACATCGTGTCTCGAAACACGGTGTCGGGAGACCAAGGGAAACATGGGAACATACCGTTGGATGGCCCCTGAGATGATTAAGGAAAAACCGTACACTCGTAAAGTTGATGTCTACAGCTTTGGAATTGTGCTCTGGGAGCTCACCACTGCTCTACTTCCATTCCAGGGAATGACCCCTGTTCAAGCTGCTTTTGCTGTTGCTGAGAAGGTAACATCCCTATCCATTTATAACTCTCTGCTTAATCTTAAAGAGACAACTCTTTAATCTTCTACCTAGCTAATCTTGTACCTATGCTAAGTAATGCTTAATGTTATACTTAATACTTCTTAAGTCTGTTTAGATAGATTTTTCTATGAACTCCTTCAAAGACAAGGCCGTCCAATTTTCTATAAACTCTTGAGATGAATTCGATGCAAAGAGTGCAATAGCAAGTCCAAAGATCTTGACTTTTTGTTAGAGGGGGCCCACGGGCCAACATGGTCTTGATTTGGATCCCTTAATGGATCAAATGGATGGGCCTTCAATGTGTTCCCTCCTACCTTGTTCCCAGCAACCACTCTCCAAATGGCCCAATCAATTCGAAAACATATCAGTGAACAATTGTTCCAGTGTGTTACATTAATGTGACATAATAGTATGGTATCATTTTATGTGTCTGACAATTAAAAACCAGTATCAGTGTGTCTTTAACGCATGATATTGTTTTTACTGCGTTAGCATCTGGTATTGTGGTTGTTTTATTGAGCACTGATTAGAGCTATTTTAGCAGAACGAAAGGCCTCCACTTCCTGCTAGTTGCCAACCAGCGCTTGCCCATCTGATAAAACGTTGTTGGTCGGCGAACCCTTCAAAGAGGCCAGATTTCAGTGACATTGTGTGCACTCTGGAGAAGTACGATGAGTGCGTGAAGGAGGGTCTTCCTCTGACTCATCATTCAGGCCTTGTCAGCAAAAACATCATCATCGAACGCTTAAAAGGTTGCGTCTCTATGAGCTCTTCCATACCTGTACAGGCTTGA