Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_07668 LG1 107903901 107907736 PREDICTED: probable serine/threonine-protein kinase At1g54610
Map

Annotations  
category   relationship type   keyword
Pathway   B 09181 Protein families: metabolism   C 01001 Protein kinases [BR:ko01001]
SNP Position Effect Amino acid change
A/G 107904274 5_prime_UTR_variant
A/C 107904288 5_prime_UTR_variant
C/T 107904594 5_prime_UTR_variant
A/C 107904872 missense_variant p.Lys46Gln
C/T 107905000 synonymous_variant p.Asn88Asn
T/A 107905005 stop_gained p.Leu90*
C/G 107905074 intron_variant
T/A 107905099 intron_variant
T/C 107905715 splice_region_variant&synonymous_variant p.Val199Val
C/T 107905773 synonymous_variant p.Leu219Leu
T/G 107905880 synonymous_variant p.Pro254Pro
T/A 107906134 upstream_gene_variant
G/A 107906164 upstream_gene_variant
G/A 107906347 synonymous_variant p.Leu356Leu
C/T 107906448 upstream_gene_variant
C/A 107906467 upstream_gene_variant
T/C 107906488 upstream_gene_variant
G/A 107906491 upstream_gene_variant
A/T 107906492 upstream_gene_variant
C/T 107906522 upstream_gene_variant
G/A 107906647 splice_region_variant&intron_variant
G/C 107906706 upstream_gene_variant
G/A 107906725 upstream_gene_variant
C/T 107906770 synonymous_variant p.Ala423Ala
C/G 107907020 upstream_gene_variant
G/C 107907025 upstream_gene_variant
G/A 107907072 splice_region_variant&intron_variant
A/T 107907073 splice_region_variant&intron_variant
G/A 107907186 missense_variant p.Met488Ile
C/G 107907273 synonymous_variant p.Pro517Pro
C/T 107907330 synonymous_variant p.Gly536Gly
A/T 107907346 missense_variant p.Asn542Tyr
G/T 107907350 missense_variant p.Gly543Val
C/T 107907579 3_prime_UTR_variant
T/A 107907634 3_prime_UTR_variant
T/G 107907637 3_prime_UTR_variant
T/C 107907684 3_prime_UTR_variant
A/T 107907701 3_prime_UTR_variant
C/G 107907721 3_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_07668.2
MGCVFGKGASKRREEVKVESAEEEGAVQNGGNVKEGGEEEKSKPSKGERRRSSKPNPRLSNPPNHVHGEQVAAGWPSWLTKVAGEAINGLIPRRADTFEKLNKVGQGTYSNVYKAKDTLTGKIVALKKVRFDNLEPESVKFMAREILILRHLDHPNVVKLEGLVTSRMSCSLYLVFEYMDHDLAGLATSPTVKFTESQVKCYMHQLLSGLEHCHNRHVLHRDIKGSNLLIDNEGILRIADFGLASFFDPHQRHPMTSRVVTLWYRPPELLLGATDYDVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSDEYWKKSKLPHATIFKPRQSYKRCIEETFKNFPASSLPLIETLLAIDPAERQTATAALHSEFFTTKPFACEPSSLPKYPPSKEMDTKLRDEEARRLRAANKTSADVKKSRPRHRGGRGIPIPDTNAELQANIDKWRLVTHANAKSKSEKFPPPHEDGSIGYPLGSSHHMDPIFDPSDVPFSSTKLSYPKSNIQTWSGPLVETSVDAPRRKKNMPGNGRTHSKNGSYR*

>Vu_07668.1
MGCVFGKGASKRREEVKVESAEEEGAVQNGGNVKEGGEEEKSKPSKGERRRSSKPNPRLSNPPNHVHGEQVAAGWPSWLTKVAGEAINGLIPRRADTFEKLNKVGQGTYSNVYKAKDTLTGKIVALKKVRFDNLEPESVKFMAREILILRHLDHPNVVKLEGLVTSRMSCSLYLVFEYMDHDLAGLATSPTVKFTESQVKCYMHQLLSGLEHCHNRHVLHRDIKGSNLLIDNEGILRIADFGLASFFDPHQRHPMTSRVVTLWYRPPELLLGATDYDVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSDEYWKKSKLPHATIFKPRQSYKRCIEETFKNFPASSLPLIETLLAIDPAERQTATAALHSEFFTTKPFACEPSSLPKYPPSKEMDTKLRDEEARRLRAANKTSADVKKSRPRHRGGRGIPIPDTNAELQANIDKWRLVTHANAKSKSEKFPPPHEDGSIGYPLGSSHHMDPIFDPSDVPFSSTKLSYPKSNIQTWSGPLVETSVDAPRRKKNMPGNGRTHSKNGSYR*


CDS Sequence:
>Vu_07668.2
ATGGGGTGTGTGTTTGGGAAAGGAGCGTCGAAGAGGAGAGAGGAAGTGAAAGTTGAAAGCGCAGAAGAAGAGGGTGCTGTTCAGAACGGTGGGAATGTGAAGGAGGGCGGAGAAGAGGAAAAGAGCAAGCCCTCAAAGGGGGAGAGAAGGCGATCTTCGAAGCCGAATCCCAGGTTAAGCAATCCACCTAACCATGTACATGGTGAGCAAGTAGCTGCAGGGTGGCCCTCTTGGCTCACCAAGGTTGCTGGGGAAGCTATTAACGGGTTGATCCCTAGAAGAGCTGACACTTTTGAAAAGCTGAATAAGGTTGGACAAGGTACATATAGCAATGTTTACAAAGCGAAGGACACTTTGACAGGGAAAATTGTTGCCCTAAAGAAGGTCCGCTTTGACAATTTAGAGCCGGAGAGTGTGAAATTCATGGCCAGAGAGATCCTTATTCTGCGCCATCTGGATCATCCCAACGTTGTCAAACTGGAAGGTTTAGTGACTTCAAGGATGTCATGCAGTTTGTACCTTGTGTTTGAATACATGGATCATGATTTGGCTGGACTTGCTACAAGTCCAACAGTAAAGTTCACAGAGTCTCAGGTTAAATGCTATATGCATCAGCTACTTTCTGGACTGGAACACTGTCACAACCGTCATGTGCTGCATCGTGATATAAAGGGGTCAAACCTTCTAATTGACAATGAAGGAATTCTTAGGATTGCTGATTTTGGATTAGCTTCCTTCTTTGATCCTCATCAAAGGCACCCTATGACCAGCAGGGTGGTAACTTTATGGTATCGACCTCCAGAGCTTCTGCTTGGAGCCACAGATTACGATGTAGGAGTGGACCTCTGGAGTGCTGGCTGCATTCTTGCTGAATTGTTGGCTGGCAAGCCTATTATGCCTGGTCGAACCGAGGTGGAGCAGCTACATAAGATATTTAAGCTTTGTGGTTCTCCTTCTGATGAATATTGGAAAAAATCGAAGCTTCCACATGCTACCATTTTTAAGCCCCGACAATCATACAAGAGGTGCATAGAAGAGACATTTAAGAATTTCCCAGCATCATCCCTGCCACTGATTGAGACCCTTCTTGCAATTGATCCAGCTGAACGCCAAACTGCCACAGCTGCATTGCACAGTGAATTCTTTACTACAAAACCTTTTGCCTGTGAACCCTCTAGCCTTCCAAAATATCCTCCCAGCAAGGAGATGGATACAAAACTGCGAGATGAAGAAGCTAGAAGATTGAGAGCTGCTAACAAAACTAGTGCCGATGTAAAGAAATCACGTCCACGTCATAGAGGTGGAAGGGGAATTCCAATTCCAGATACCAATGCCGAGTTGCAAGCAAATATTGATAAATGGCGACTGGTGACACACGCAAATGCGAAGAGCAAGAGTGAAAAGTTTCCTCCTCCTCATGAAGATGGAAGTATAGGGTACCCTTTGGGTTCTTCACATCACATGGATCCAATTTTTGATCCTTCTGATGTTCCATTTAGTTCCACAAAGTTATCATATCCAAAATCAAATATCCAGACCTGGTCTGGTCCCTTGGTGGAAACTAGTGTGGATGCACCAAGAAGAAAGAAGAACATGCCAGGGAATGGCCGCACACATTCAAAGAATGGCTCTTATAGATAA

>Vu_07668.1
ATGGGGTGTGTGTTTGGGAAAGGAGCGTCGAAGAGGAGAGAGGAAGTGAAAGTTGAAAGCGCAGAAGAAGAGGGTGCTGTTCAGAACGGTGGGAATGTGAAGGAGGGCGGAGAAGAGGAAAAGAGCAAGCCCTCAAAGGGGGAGAGAAGGCGATCTTCGAAGCCGAATCCCAGGTTAAGCAATCCACCTAACCATGTACATGGTGAGCAAGTAGCTGCAGGGTGGCCCTCTTGGCTCACCAAGGTTGCTGGGGAAGCTATTAACGGGTTGATCCCTAGAAGAGCTGACACTTTTGAAAAGCTGAATAAGGTTGGACAAGGTACATATAGCAATGTTTACAAAGCGAAGGACACTTTGACAGGGAAAATTGTTGCCCTAAAGAAGGTCCGCTTTGACAATTTAGAGCCGGAGAGTGTGAAATTCATGGCCAGAGAGATCCTTATTCTGCGCCATCTGGATCATCCCAACGTTGTCAAACTGGAAGGTTTAGTGACTTCAAGGATGTCATGCAGTTTGTACCTTGTGTTTGAATACATGGATCATGATTTGGCTGGACTTGCTACAAGTCCAACAGTAAAGTTCACAGAGTCTCAGGTTAAATGCTATATGCATCAGCTACTTTCTGGACTGGAACACTGTCACAACCGTCATGTGCTGCATCGTGATATAAAGGGGTCAAACCTTCTAATTGACAATGAAGGAATTCTTAGGATTGCTGATTTTGGATTAGCTTCCTTCTTTGATCCTCATCAAAGGCACCCTATGACCAGCAGGGTGGTAACTTTATGGTATCGACCTCCAGAGCTTCTGCTTGGAGCCACAGATTACGATGTAGGAGTGGACCTCTGGAGTGCTGGCTGCATTCTTGCTGAATTGTTGGCTGGCAAGCCTATTATGCCTGGTCGAACCGAGGTGGAGCAGCTACATAAGATATTTAAGCTTTGTGGTTCTCCTTCTGATGAATATTGGAAAAAATCGAAGCTTCCACATGCTACCATTTTTAAGCCCCGACAATCATACAAGAGGTGCATAGAAGAGACATTTAAGAATTTCCCAGCATCATCCCTGCCACTGATTGAGACCCTTCTTGCAATTGATCCAGCTGAACGCCAAACTGCCACAGCTGCATTGCACAGTGAATTCTTTACTACAAAACCTTTTGCCTGTGAACCCTCTAGCCTTCCAAAATATCCTCCCAGCAAGGAGATGGATACAAAACTGCGAGATGAAGAAGCTAGAAGATTGAGAGCTGCTAACAAAACTAGTGCCGATGTAAAGAAATCACGTCCACGTCATAGAGGTGGAAGGGGAATTCCAATTCCAGATACCAATGCCGAGTTGCAAGCAAATATTGATAAATGGCGACTGGTGACACACGCAAATGCGAAGAGCAAGAGTGAAAAGTTTCCTCCTCCTCATGAAGATGGAAGTATAGGGTACCCTTTGGGTTCTTCACATCACATGGATCCAATTTTTGATCCTTCTGATGTTCCATTTAGTTCCACAAAGTTATCATATCCAAAATCAAATATCCAGACCTGGTCTGGTCCCTTGGTGGAAACTAGTGTGGATGCACCAAGAAGAAAGAAGAACATGCCAGGGAATGGCCGCACACATTCAAAGAATGGCTCTTATAGATAA


Promoter Sequence:
>Vu_07668::LG1:107901901-107903901(+)
ATATGAATTTTTTAATGTTTGTGTTTGAGTTTCTTCGTTAACCTTTAAATTCATGTAGCATCTTATGGGTTATTATCGTATACTCAAACTTATTTAATAGACAAAACTATAACATCATGTAACTTGAATAAATAATTTAGTGTTCCTCCTATTAGAGATGACAACAAAATTCATATCTGCATATCAAATCTGTAATAAATATTAAATAAATATTATTAATAAAAACTTGAGGTTATTAATATGGAGATTTAACTACTTGATTATGAAACAAATACAAATATTATGATATCTTACTTACATATGCTAATGATTATATTTTGGTATAATTCAAATCAAATTAATTATTCAATAAAATATTAATATAAAAAAATTTATTTTAATTATATCTATGGATACATTCACATTCCTAAAGTTTTATTGGTTGGTTCGAAGTTCTTCTCATCAAACTTACAATTGAAACTATACCACTAACATCTTATCCACATATAATAAAATCATTATCATAAAATCTATCATAATAAATAAATATAATGGTCTAAACTTAATACACAAGGGAGGGGTCAAATCTTTTTGTAACAAACACTTAGATGCCATTAATTTGGTCAATTTGCAAATCAAACCTTTTTCTTCTTCTTTAGAATCTTTTGGTTCCTGGTCATTTTCTGCAAAAACTATATCTTTTAAAAAATAACCTCATAGATGGTGGAATCTCATATTATACCCTTTGCTTTTAGTGAATATAGTAAAATTCAATAAAAAGATAAATTCTTTAGCACTTTTTTATCGTCAAGCAAGAAAAATACTTTATGTTATTCACTTTCATATACAAATAACGTTTTAAATTTAACTCAATTGTACGAAATTGATTTTTAAATGAAATTTGCATTGATTTATATTCCATCTTTTTTAGTTGGCATTGAATATCCAACAAAACTTAACTCCCACGCAGCAGAAAGAGATGAAAATAAGTGACCAAATTAATATCGTGGAGTGTATAGAAATGTGAAGTTCATTCTGTGATAGCAGACAAACAACAACCAAACATAGTTGTTTGCAGGTTCCCAATCATGTTACCTCAGTACTAGGTACAATTTTGATTCCATGTCCAACTAACCAAATTTTCTCAGTTTTGGAAAATGTTGCTGCCTAATCTATCTCATCATTTATGTAACACACACATATATAATTGAAGGGGGCGAATTAAAATGCTTAAGGTCAATTTATGCTCACCTATCTTAACCACCTTGTTTTCTTCTATCTGTCCTTTGCCAATAAAATACTCACTGGGTTACTGTAATGTAAACCAATCACACTCTTGCTTACTTCACCACATTTTTTACGATTTTTTCCCATCAATCACTGTGGCTCACAAAATTTCCCATATATATCCTATGCCATTGCCCTGCACCACACAATTTTAAATTTTTCTCTCGTTTACTTTAATTTTAATTATTTAACCATATATTCATTTTTACATCATTTACAAAATATATTTTTTTACATGATTTTTGAGAACCCGACAAAGTTCCAAGTTAGCACAAACAAAAGGTCCAAACAGGACCAGAGAGCGTAATAAAGTACGCATTTATCACCAATGACTAAGAACCAAACCAGCAGAGAAAGTACGATTCAAGCCAACTGTCTCCTTTGACAATAAGCTGCATGTTAAAGCAATCAACCAACTTCGATGTAATGCATGTAATATTGTTATATTTTTGTTATTGTGGTGTTTTTATCATTATACATGAACTATAATTAAAGTTTTATTTCTCTATTGCGATAGCTATTGATTGCATTGTGTTCACTTGCAATGTGAATGACCAACTTTTCTTTCTTTTTCCAACGAAAAAAGCAAAGCAAATAGATATGTAATAGCCAAGGAAGGAAGCCATGATGAGGTAAAGTTAGTTTAGTTGCTAGAACATATAGGACCCACCATGCCATTTAACCAGTCATATTTTTGCATGTTAAAATTAATATAAACTTCACTGTGGTCGTTG


Gene Sequence:
>Vu_07668(+)
GATCATCAAGCTTAATAAATAATTATATGTGTCCAGGGCACGTGTCTTTGATTTTTCTCTCTATAGTTTTTCCATGGAAGTTTCCTTAGTGGATACAAACCCAGTGCTGCAAAAATCCGAAACTAAATTGTATGTAAAGACACTACAACGTTGTGAGTGTGTGAGAGTGAAGTGGGAAAAAGCATAGCAGATCCTTCCCGCACATTATTATCTTATCTCAATTTCTAGTTTCCGAGACATCATTTTTGTGTACATTAATCTTTGAATCTGGGATGCTCCAAACTCCTAGAATTTTACTGTTTTTTACAACCTTGATCTAACTCAGTATCCATCCATATCTACATACACTTTAAAGGGGTTAACTGAAAAAAAAAAAAAAAAAAAAAAACCCACTTCCGAGAACATAGCAGGAACAGCAAGAAACAAAGGAACTTCGCTGGTGGGGGAAAAGCTGGTCATATTTTACTGTTTTTTTTTTCTGCTTTTTCTTTTCTGCTGTGGATGTCTGACTGATATAAGCTCATTTTCTTTGACTGCATTGCAACTTGTGGGGTGACACCAAATCATTGCATTCTCACTTTTGTCTGGAAAAGTTAGGGTCTTTTGAATTTACATTTGCTCATTCCCTTGGTTGAAACTCAAAACCCCCCTTTCAGCTTTTTGAGATTGGTGGGGGGGAAACTCCTGTTAGGGCTTGATTCTCATTCGCTGTGGCGTTTTGAATTGCAAGAAAATGAGGGAAAATGGTGTTGTGGCAATTGAGGGAATGTGAGGTGGAGGAAGGGGAAAAAGAAGAAGAAGAAAAGACGGGGTTGAGTAAATGAGTGTTTTGAGACATGGGGTGTGTGTTTGGGAAAGGAGCGTCGAAGAGGAGAGAGGAAGTGAAAGTTGAAAGCGCAGAAGAAGAGGGTGCTGTTCAGAACGGTGGGAATGTGAAGGAGGGCGGAGAAGAGGAAAAGAGCAAGCCCTCAAAGGGGGAGAGAAGGCGATCTTCGAAGCCGAATCCCAGGTTAAGCAATCCACCTAACCATGTACATGGTGAGCAAGTAGCTGCAGGGTGGCCCTCTTGGCTCACCAAGGTTGCTGGGGAAGCTATTAACGGGTTGATCCCTAGAAGAGCTGACACTTTTGAAAAGCTGAATAAGGTATGGAGGTTAATGACTGCTTTGCTTTCTTTTCCAGTTCAGGTATGTGGAGCTTGGTTATTTTTATTTCAAATTTGAAGATTTTATTGCTTATGTTGTTTTGTTTTCAAATGTAAGCAACATCTAGCAATAAGAATTCTGTGATTTGGTTTTTTCTGTCATCTTGTAAGTTATTAATTGAAAGCCCTTCTATTGAAATGTTTGTTCTGGTAAAGTTAACAAATATCTGGTCTGTGACTGGCCTTTTTGGACTATTTTTCCATCAGGTTGGACAAGGTACATATAGCAATGTTTACAAAGCGAAGGACACTTTGACAGGGAAAATTGTTGCCCTAAAGAAGGTCCGCTTTGACAATTTAGAGCCGGAGAGTGTGAAATTCATGGCCAGAGAGATCCTTATTCTGCGCCATCTGGATCATCCCAACGTTGTCAAACTGGAAGGTTTAGTGACTTCAAGGATGTCATGCAGTTTGTACCTTGTGTTTGAATACATGGATCATGATTTGGCTGGACTTGCTACAAGTCCAACAGTAAAGTTCACAGAGTCTCAGGTATTTACATATTGTAAAATCAAGAACTGGGGTTGGTTGAAATTTATGATTCAAATCAGTCTTCTGTTTCTGATTTGGAACTTCTTTTCTTGATCATGTCTGGGTGGGTGTTTTAGGTTAAATGCTATATGCATCAGCTACTTTCTGGACTGGAACACTGTCACAACCGTCATGTGCTGCATCGTGATATAAAGGGGTCAAACCTTCTAATTGACAATGAAGGAATTCTTAGGATTGCTGATTTTGGATTAGCTTCCTTCTTTGATCCTCATCAAAGGCACCCTATGACCAGCAGGGTGGTAACTTTATGGTATCGACCTCCAGAGCTTCTGCTTGGAGCCACAGATTACGATGTAGGAGTGGACCTCTGGAGTGCTGGCTGCATTCTTGCTGAATTGTTGGCTGGCAAGCCTATTATGCCTGGTCGAACCGAGGTAATCTTTGAATGATTCATTGCATTTTATAATTTCTCTTGGAGAACCTTTCAAGAACATTAGACTTTTCACTTTACTAGTAAATGGTGCAAGAGTTTGTTACTCATGCTGTGAGGTTTGTGCTTCTGATTTTGTTGATACATATCCACCGTGCTTCATAGGTGGAGCAGCTACATAAGATATTTAAGCTTTGTGGTTCTCCTTCTGATGAATATTGGAAAAAATCGAAGCTTCCACATGCTACCATTTTTAAGCCCCGACAATCATACAAGAGGTGCATAGAAGAGACATTTAAGAATTTCCCAGCATCATCCCTGCCACTGATTGAGACCCTTCTTGCAATTGATCCAGCTGAACGCCAAACTGCCACAGCTGCATTGCACAGTGAAGTAAGATACAATTTTATCACTAGCTAATCCTGTGAAATCACTTATTTCTGCTATTTTCTTAAAATATATGTGAAGGATTGCTACATCTAAGTCTAACGTTAACTGCTTCTGTTTTGCAGTTCTTTACTACAAAACCTTTTGCCTGTGAACCCTCTAGCCTTCCAAAATATCCTCCCAGCAAGGAGATGGATACAAAACTGCGAGATGAAGAAGCTAGAAGGTGGATAGCTTAAATTGCTAGAACTCTCAATTATCTTTTGAATTCTTGTTTGCATAAAAATCTGACGAAGTTTGCATGTTACGTCGCTTTGCCATGACTGTAGATTGAGAGCTGCTAACAAAACTAGTGCCGATGTAAAGAAATCACGTCCACGTCATAGAGGTGGAAGGGGAATTCCAATTCCAGATACCAATGCCGAGTTGCAAGCAAATATTGATGTATGTCAGATAAGCACCTCATTCATTTATGCAGATACTTTTTGTCTTGCTGAATATTTTATTCTTCTTATGGATAAAGCGATTGCTAAAACTTTTATCTTCATTTGCATCTATCTGTCTAAATTTTCATAATATACATTGATATATACAATGTGGTTGGTTCATATGAGAGCTTAGTTTTGTGTCTGAATGCTGTAGTAATGATTTAACTGTTGAATCAGAAATGGCGACTGGTGACACACGCAAATGCGAAGAGCAAGAGTGAAAAGTTTCCTCCTCCTCATGAAGATGGAAGTATAGGGTACCCTTTGGGTTCTTCACATCACATGGATCCAATTTTTGATCCTTCTGATGTTCCATTTAGTTCCACAAAGTTATCATATCCAAAATCAAATATCCAGACCTGGTCTGGTCCCTTGGTGGAAACTAGTGTGGATGCACCAAGAAGAAAGAAGAACATGCCAGGGAATGGCCGCACACATTCAAAGAATGGCTCTTATAGATAAATGCTGTCAAAGATTATTCAAAATAATTTAAGAATTTCAATACAACACCAATTATTTTTCACAAACATTGGTGTTTGGTGAAGCTGCAAAAGTGCTGCTGTTCTATTTTCTTGCTTCTGGTAAAGCCATTGGCACCCCAGAGCTACATGATATTTTATCTTTCTCAATGATCAAGGGTTTATTCCCTATCTTGTATAATGATCATACATATTGTACGCATAATCTTGGTTATGCTGAATTTTATACAGATTTTTCATTTATAGGCTTTTTTATTATTCTTTTTTCAGCTTTGTATAACACATTATTCATGCATGATTCACTTTCTAGTTACTTATGCATTTACCACAGAATATAATTCGACTTTTTATTTTTA