Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_07385 LG1 105280344 105282292 PREDICTED: pollen receptor-like kinase 3
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of pollen tube growth, protein phosphorylation, regulation of pollen tube growth, regulation of pollen tube growth, protein phosphorylation, protein phosphorylation, regulation of pollen tube growth, regulation of pollen tube growth, regulation of pollen tube growth, regulation of pollen tube growth, regulation of pollen tube growth
Cellular Component   located in   extracellular region, plasmodesma
Molecular Function   enables   protein serine/threonine kinase activity, protein binding, protein serine/threonine kinase activity, protein serine/threonine kinase activity, kinase activity
SNP Position Effect Amino acid change
C/T 105280368 missense_variant p.Glu598Lys
G/T 105280401 synonymous_variant p.Arg587Arg
G/A 105280704 missense_variant p.Arg486Cys
C/A 105281105 missense_variant p.Glu396Asp
G/A 105281133 missense_variant p.Thr387Met
A/G 105281136 missense_variant p.Ile386Thr
A/G 105281144 synonymous_variant p.Pro383Pro
T/G 105281558 synonymous_variant p.Ala245Ala
G/T 105281648 synonymous_variant p.Leu215Leu
G/T 105282072 missense_variant p.Ser74Tyr
G/A 105282083 synonymous_variant p.Leu70Leu
G/T 105282256 missense_variant p.Leu13Ile

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_07385.1
MAAVRLFFFLLLLSLLPLSHPLSDNQALLNLKKSFSDPQSLSSWVPDQNPCSSRWVGVICVNNVINSLHLTDLSLSGTIDIEALSQIPSLRSISFVNNNFSGPIPPFNKLGVLKAIYLTNNKFSGPIPSDFFSQLASLKKIWLSNNKFSGPVPQSLTTLRFLSELHLENNEFSGPVPELKQDIKSLDFSNNKLQGPIPISMSRFDAKSFSGNIELCGMPLDKPCESAASEGPGWGLKVVIIIFIAAVLAGVFVMARSKRQRDDDFSVMSRDNAEEVVQVHVPSTNHSRGTSDGSKKESTTSKKGAGRSIGDLVMVNDERGTFGLPDLMKAAAEVLGNGGLGSAYKAAMASGLSVVVKRMREMNKVSRDIFDAEMRRFGRIRNPNIITPLAYHYRKEEKLFVTEYMPKGSLLYVLHGDRGSSHSDLNWPIRLKIVKGIARGLGFLYKEFSSEDLPHGNLKSSNVLLTDNYEALLGDFAFHPLMNHNYAVQTMFAYKTPDYVTYQRVTQKTDVYCLGIIVLEVITGKFPSQYHSNGKGGTDVVQWVLTAISDRREAELIDPELKSSHSNSLNQMLQLLQIGAACTESNPDQRLNMKEAIRRIEEVQV*


CDS Sequence:
>Vu_07385.1
ATGGCCGCTGTTCGCCTATTCTTCTTCCTCCTCCTCCTCTCCCTCCTCCCTCTCTCCCATCCTCTCTCGGATAACCAAGCTCTCCTCAACCTAAAAAAATCCTTCTCCGACCCCCAATCCCTCTCCTCCTGGGTCCCCGACCAGAACCCTTGCTCCTCCCGTTGGGTCGGCGTCATCTGCGTCAACAACGTCATCAACAGCCTCCATCTCACCGACCTCTCCCTCTCCGGCACCATAGACATCGAAGCCCTCTCCCAGATCCCCTCTCTCCGCTCCATCAGCTTCGTCAACAACAACTTCTCCGGCCCCATTCCTCCTTTCAACAAACTCGGAGTCCTCAAAGCCATCTACTTGACCAACAACAAGTTCTCCGGCCCCATCCCCTCCGACTTCTTCTCCCAGTTAGCCTCCTTGAAGAAAATATGGCTTTCCAACAACAAATTTTCTGGCCCCGTCCCCCAATCCTTAACCACCCTCCGCTTCCTCTCCGAGCTTCATCTCGAGAACAACGAGTTCTCCGGCCCCGTCCCCGAACTTAAACAGGACATCAAATCACTCGACTTCTCCAACAACAAGCTCCAAGGCCCGATCCCCATCTCCATGTCGCGCTTCGACGCCAAATCTTTCTCCGGCAACATTGAACTCTGCGGGATGCCGCTGGATAAACCGTGTGAGTCCGCAGCCAGTGAAGGCCCCGGTTGGGGATTGAAGGTGGTTATTATCATCTTCATTGCAGCTGTTCTCGCCGGCGTTTTCGTCATGGCGCGATCCAAGCGTCAACGCGACGATGACTTCAGCGTGATGAGCAGGGATAACGCGGAAGAGGTGGTGCAGGTGCACGTGCCAAGCACCAACCACAGCAGGGGAACCTCCGATGGGAGCAAGAAGGAGTCGACGACGTCGAAGAAAGGGGCGGGGCGGAGTATTGGTGACCTCGTGATGGTGAACGACGAGAGGGGCACGTTTGGGTTGCCTGATCTGATGAAGGCTGCGGCGGAGGTTCTCGGAAACGGTGGGCTGGGTTCGGCGTACAAAGCCGCCATGGCCAGTGGGTTGTCTGTGGTGGTAAAGCGGATGCGGGAGATGAATAAAGTGAGCAGAGACATCTTCGACGCCGAGATGAGACGTTTTGGAAGAATCAGAAACCCTAACATCATCACGCCTCTCGCTTACCATTACCGCAAGGAGGAGAAGCTGTTCGTCACAGAGTACATGCCCAAAGGAAGCTTGTTATACGTCTTGCACGGTGACAGAGGATCGAGTCATTCGGACCTGAACTGGCCAATCCGTTTGAAAATCGTGAAGGGAATAGCACGAGGGTTAGGGTTTCTGTATAAAGAATTTTCTAGCGAAGACCTGCCACATGGAAACCTGAAATCAAGCAATGTTCTGCTAACTGATAATTACGAAGCTCTCCTCGGAGATTTCGCCTTTCATCCTCTCATGAACCACAACTACGCCGTACAGACAATGTTTGCATACAAAACTCCAGATTACGTAACATACCAGCGTGTGACACAGAAAACCGACGTCTACTGCCTGGGAATCATCGTTCTTGAGGTGATCACCGGGAAATTCCCTTCTCAGTATCACAGCAATGGCAAGGGTGGCACTGACGTGGTGCAATGGGTGCTAACTGCAATCTCTGACAGAAGAGAGGCGGAATTGATCGATCCAGAGTTGAAGAGCAGTCACTCTAACTCCCTGAATCAAATGCTGCAACTTCTCCAAATAGGGGCTGCTTGCACGGAGAGCAACCCCGACCAACGACTTAACATGAAAGAAGCCATTAGGAGGATAGAGGAGGTTCAGGTTTAA


Promoter Sequence:
>Vu_07385::LG1:105282292-105284292(-)
TAAGAATTTGGAAAATAACTACATATTAATTCCTTCATCCGAAAGCAAACATTGCATAGGAGTGCAAATATGTTTTCAAATCGAATACAGTGTTGATGGTTCAATCAATAAATACAAAGTTTGGTAACCAAAGATTATATAGACATAGGTTGAAATAGCTTTTGTAAGGTTTTATTAGTCATTATCACTGTAAAATAACAATTAAATATCAATAATACATTCTTAATTTCTTAAATGGTGAATTATTTAAAAAAATATATATACATAAATAACAAAATATCAACAAAAGAATTAGTTTGCAAGTCAAACAAGTTTACATACGAACTTAAACAAATCTATAAACAATTATTTTACAAATTCTTAACATTTTATTGTAACATGATTATTTATGCTTATATATAGTCCAAAATTGATTATTCTTCATGATATTTGTTCAGAACAATTATATAACTTAAAGCCAAGATTAAAAGTCATTTGAACATACATTCTTTTTATATTTTTAAAGAATAAAATCACAATCTTAGAACGTCTTATATCAAGACAAAATGGTAATGGAGTTCGAAACTTTAAAATTAGCAATGTTTCAATATATTTCACATCAAAAGAACATTAAAATGAGTTAATTATACATAAAGATAATATTTTAAATATGATATTTTGTATTATATATAGTTTAAATAGTTCATAATAGTTTTAAAATTGTTTTTAAAATTTAGTTTAATTTTATAATAATTCAGGTTAATTCATACATTTTTTTCTTCATGAAAACTTGATGTATATTTTTTAAATTGCAATAAACCACTTGATATATTTGAGAAGAAATTCTAATGTATACGTTGTTTTGGGGAAACTTTGTTGTCTAGATGAAGAGAATCATGTGATAATTGACTTACTAGATTTTGCTTAAAACACGAACAAATATATCATATCTGGTTATGTTTATGATAGTTTTTTTATTCTTCTTAATATCATAATTAATTTTTTTTATTTTATATTCCTCCTCTAAATCATTCCATCACATTTGTTTTTTGAAAGGTAAACCTCTTCTCCTAACTCTCTTACTTTCTTCATAGTCTAGTTGTTTTTTATGCTTTCTTATTTTTTTTTACAATGAAATAATATTTTGATTGAACATACGTCATTTTCTCATTAAATTTAAAATACATGAGTGCAATGATAAATAAATAATGAAATTAATGAAAAAATAACATGTGTTCAAAATATTAGATGGTGTACCGACTTTATAGTTCATTAACCATCAAACACCATGAAACACAATCCAACATGGTTGGAGCTTGATGCAGACGAGCCTCCTTCTTATGAACCTTTCCAACATTCATATCAGCACATACACCCTAAGTTAAATACAAAAAAGAGCAATTTTATTAAAATTAGTGAAATTCAGTGTTAAGCTTTACGCTCAAGATGAACTGTTATTGGTGTAAAATTTGGTTAACTCAGTCTAGTCTTTACTACGTGTACTTTGCAAGTTGAAACCAGCTACTAGTTTGGAGATGCTATTTTTAACATTGATGGATGGAAAAAATCTAACGTTAAAATAATAATAAAAAGAATAGAAAAGAGATAATATTAGAGAGGTATGTTTGGTTTATTTATATTGTAGATAGAGTAGATAGGATGAGAGAAAGAGGTAGGGATGCATGGGAGGTGGAGGGAAAATACGTGCATGGATGAGTGGTTGACAGCCGCAAAAGGCAAAGGCCAGAAATGAAGGTGACAGGGTCAAGAGTGGGCGAAATTAATGGGAAAATTTTGAAGGAGAGAGCGAGGTAGCTATTGTTAGAATGGTGGTAATTGTGGGAGCTCCATCTCTCAAACACGCACGACAACCTAGCCAGGTAGTTTTCCATTCCCGTAGGTGGGTACCCAAATTCAACAAACAAAACAAAAAAAGGCAAATCCAAAACAATCAGAGAACCTCAATCTTTCCGAGCAGCGGCCCATTTCTCTCCCGGACGCATAAGATTTCCGGCACGGCG


Gene Sequence:
>Vu_07385(-)
ATGGCCGCTGTTCGCCTATTCTTCTTCCTCCTCCTCCTCTCCCTCCTCCCTCTCTCCCATCCTCTCTCGGATAACCAAGCTCTCCTCAACCTAAAAAAATCCTTCTCCGACCCCCAATCCCTCTCCTCCTGGGTCCCCGACCAGAACCCTTGCTCCTCCCGTTGGGTCGGCGTCATCTGCGTCAACAACGTCATCAACAGCCTCCATCTCACCGACCTCTCCCTCTCCGGCACCATAGACATCGAAGCCCTCTCCCAGATCCCCTCTCTCCGCTCCATCAGCTTCGTCAACAACAACTTCTCCGGCCCCATTCCTCCTTTCAACAAACTCGGAGTCCTCAAAGCCATCTACTTGACCAACAACAAGTTCTCCGGCCCCATCCCCTCCGACTTCTTCTCCCAGTTAGCCTCCTTGAAGAAAATATGGCTTTCCAACAACAAATTTTCTGGCCCCGTCCCCCAATCCTTAACCACCCTCCGCTTCCTCTCCGAGCTTCATCTCGAGAACAACGAGTTCTCCGGCCCCGTCCCCGAACTTAAACAGGACATCAAATCACTCGACTTCTCCAACAACAAGCTCCAAGGCCCGATCCCCATCTCCATGTCGCGCTTCGACGCCAAATCTTTCTCCGGCAACATTGAACTCTGCGGGATGCCGCTGGATAAACCGTGTGAGTCCGCAGCCAGTGAAGGCCCCGGTTGGGGATTGAAGGTGGTTATTATCATCTTCATTGCAGCTGTTCTCGCCGGCGTTTTCGTCATGGCGCGATCCAAGCGTCAACGCGACGATGACTTCAGCGTGATGAGCAGGGATAACGCGGAAGAGGTGGTGCAGGTGCACGTGCCAAGCACCAACCACAGCAGGGGAACCTCCGATGGGAGCAAGAAGGAGTCGACGACGTCGAAGAAAGGGGCGGGGCGGAGTATTGGTGACCTCGTGATGGTGAACGACGAGAGGGGCACGTTTGGGTTGCCTGATCTGATGAAGGCTGCGGCGGAGGTTCTCGGAAACGGTGGGCTGGGTTCGGCGTACAAAGCCGCCATGGCCAGTGGGTTGTCTGTGGTGGTAAAGCGGATGCGGGAGATGAATAAAGTGAGCAGAGACATCTTCGACGCCGAGATGAGACGTTTTGGAAGAATCAGAAACCCTAACATCATCACGCCTCTCGCTTACCATTACCGCAAGGAGGAGAAGCTGTTCGTCACAGAGTACATGCCCAAAGGAAGCTTGTTATACGTCTTGCACGGTACCACCTTCATTTCTAACTATTCATTTTCATTTTCAAAAACATATTGGAGTAATGAAAATTATATGCATGCAAGGTAATATATACAGTGATATGTATAATTAAAGGAGATTCGGTAAAATGTTTTTCAGGTGACAGAGGATCGAGTCATTCGGACCTGAACTGGCCAATCCGTTTGAAAATCGTGAAGGGAATAGCACGAGGGTTAGGGTTTCTGTATAAAGAATTTTCTAGCGAAGACCTGCCACATGGAAACCTGAAATCAAGCAATGTTCTGCTAACTGATAATTACGAAGCTCTCCTCGGAGATTTCGCCTTTCATCCTCTCATGAACCACAACTACGCCGTACAGACAATGTTTGCATACAAAACTCCAGATTACGTAACATACCAGCGTGTGACACAGAAAACCGACGTCTACTGCCTGGGAATCATCGTTCTTGAGGTGATCACCGGGAAATTCCCTTCTCAGTATCACAGCAATGGCAAGGGTGGCACTGACGTGGTGCAATGGGTGCTAACTGCAATCTCTGACAGAAGAGAGGCGGAATTGATCGATCCAGAGTTGAAGAGCAGTCACTCTAACTCCCTGAATCAAATGCTGCAACTTCTCCAAATAGGGGCTGCTTGCACGGAGAGCAACCCCGACCAACGACTTAACATGAAAGAAGCCATTAGGAGGATAGAGGAGGTTCAGGTTTAA