Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_07319 LG1 104679150 104680806 PREDICTED: putative transcription factor bHLH041
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/T 104679166 missense_variant p.Gly6Val
C/G 104679233 intron_variant
A/C 104679402 synonymous_variant p.Ile56Ile
T/A 104679411 synonymous_variant p.Ser59Ser
A/C 104679433 missense_variant p.Ile67Leu
G/A 104679439 missense_variant p.Val69Ile
C/T 104679473 missense_variant p.Ala80Val
T/C 104679500 missense_variant p.Ile89Thr
A/T 104679969 intron_variant
C/T 104679982 intron_variant
C/A 104680011 intron_variant
T/C 104680025 intron_variant
A/C 104680064 intron_variant
T/C 104680080 intron_variant
G/A 104680108 intron_variant
T/C 104680113 intron_variant
G/A 104680211 intron_variant
A/T 104680226 intron_variant
T/G 104680233 intron_variant
G/A 104680484 missense_variant p.Gly238Glu
A/G 104680494 missense_variant p.Ile241Met
C/A 104680782 missense_variant p.Thr288Asn

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_07319.1
MAVFMGCKEGEIELGFSNIPQDDIETALKNLFPEDFYMRFQSIDQNPYSSSSSSFIISSTNTFNQSINVPGTSHSNFPDALGVAPTQPISHQPLSQVIPFPSHLPTPEGEHQEMVRALIRVLSSTSQQQLHQVLPHTSVTQPGAPDVVRYIPDMTNPNIEPHTEFNFRRQNLKNTSLVRERNSTVQATDHISTLQHRFRMISERRRREILKVSFEALRAILPPETKKSKAMILTTAKGRIISLMADIEKLNMRKQQLRKDLSGVMSEENKGRKDSELNLDFHENKPPYYRRRDNH*


CDS Sequence:
>Vu_07319.1
ATGGCTGTCTTCATGGGGTGCAAAGAGGGAGAAATCGAACTTGGCTTCTCCAACATTCCTCAAGATGACATTGAGACAGCCCTTAAGAATTTATTCCCAGAAGATTTCTATATGCGTTTCCAATCAATTGATCAGAATCCATATTCATCGTCATCATCTTCTTTTATAATATCATCTACAAATACCTTTAATCAATCAATCAATGTTCCGGGAACTTCCCACTCCAACTTCCCTGATGCCCTCGGTGTGGCTCCCACACAACCGATTTCTCACCAACCATTGTCTCAAGTCATTCCATTTCCAAGCCATTTACCGACACCAGAGGGTGAACATCAAGAAATGGTAAGAGCATTAATCCGAGTCCTGTCTTCAACTTCTCAGCAGCAGCTCCATCAAGTTTTGCCTCATACTTCTGTAACACAACCTGGAGCTCCCGATGTCGTGAGATATATACCAGATATGACAAACCCAAATATAGAACCCCACACGGAGTTCAATTTTCGCAGGCAAAACCTGAAGAATACATCACTAGTGAGAGAACGCAATAGTACTGTTCAAGCAACCGATCACATCAGTACCCTGCAGCATCGCTTTCGTATGATATCGGAGAGAAGAAGGCGTGAAATACTCAAAGTGAGTTTTGAGGCACTTAGAGCAATTCTTCCTCCGGAAACTAAGAAAAGTAAAGCGATGATCCTGACAACAGCAAAGGGGAGAATAATATCTTTGATGGCTGACATTGAAAAGCTTAACATGAGAAAGCAGCAGCTTAGGAAAGATTTGTCAGGTGTTATGAGTGAAGAAAACAAAGGTAGAAAGGATTCAGAACTTAACCTTGATTTCCACGAAAACAAACCTCCATACTACAGAAGGAGGGACAACCATTAA


Promoter Sequence:
>Vu_07319::LG1:104677150-104679150(+)
TTTGAAAATTCATATCAATTGAGTCCTTTCCGTTAAGTTGGCTGGACGGCGTTAAAAAAATTGATGAGTGGATGCTGAGATGACGAACGGACGCTCGTCCACCAGCGGACGAACGCTCGTCCACCAGCGGACGAACGCTCGTCCACCAGCGGACGAACGCTCGTCCATCAGCCAACGAACGCTCGTCGACCACCGAACGAACGGTCGTCCAGTGTGGAACGAACGGTCGTCCAGCAATAATAGGTCGACGAGCGTTCGTTTTCTGGTGGACGAGCGTTCGTTCTCTGGGGGACGAGCGTTCGTTCTCTGGTGGACGAGCGTTCGTTCGCTGGTGGACGAGCGTTCGTTCGCTGGTGGACGAGCGTTCGTTCGTCATCTCAGCATCCACTCATGAATTTTTTTAACGCCGTCCAGCCAACTTAACGGAAATGACTCAATTGATATGAATTTTCAAAATTAAGGACCATTTTGATACACTTTAAAAAACGAGGACCCAATTGAGACATTCGTACATAAATAGAGATGTACTAAAGGATTAAACCTAATTTATAATGTTCTTTTTGGCAACTCCAGAAAAAGAAAGTGTATACGTACTTTACCTCAAACTTTCAATTAGTGTTTTTTTTTTTAAATATGTAATTTGATATACATAAGTTTTTTATATTCATTTAATATAATTTTTTTATTTTATTTTTTCTTGATATAAAAAATTAATTTTTTTTATAATTATTTTATTTTTATATTATATCTTAAATAAACGTAAAAATATGTGATTCTATCATTATTTATTTCTTTATTATACGAAGAAATAATGATGCTGCTTTAAAGAAACAATAATGATATTCACACGTTTCTATCCACATCTGTGTCTGTGTCTCCTCAATTTTTCTCCTTTTAGGAATGAGTTCTTCCATAGTAAGAATTTTGTTTTTTCTCTCTTCCTTATGTTTCCTTAATATTAAAAATTGAATTGCAAAGAAACAATTCCCACACCTGTCTTAAGCAAGATGAAGAATTAATCCACCTTGCCCTCATTTTCTTCATTTGTTCTGGTCAAAGACTTTTCCAAACGTACTTTTACAATAAAAAATATTTTTTTAACAATTTTTTATAACTTCCTGTAATAAATTCATTTCAAATATTTTTCTAAAAATAAATTTAAACGAATTAATAAAATAATAACACATAATTTATTATCAAAAAATTATTATAAAAAATTATTAATATCTCATTATCTTTTTAATTAATATATATATATATATATATATATATATATTTATTTATTTATGACTCTTTGAAGGAGTCCGTAGCAAGAGGACAATTGTCTTAAGGTAACAACGACAAGTGACTATACATTAATTGTCTTTTCTTCCAGTTCACACAAGCATTCATTGCTTCAACCAAACTACCTTCATACTTTTCAAAATTCCACCTTCTCTACGAGTCATTTCCCACGCTCCCATTCATTCCTATAAATCACACATTTCGATTTTATCAATCTAAATGTATATATACCTTCATACAACAAACCAACTTCTTCTCAAACCCTTTTTCATCAGTATGGGGCTTTAACTTTTGATGTCAGTGATGAGTAAGTGCTGCATTATTCATCACCATCATTCATAATCTTTCTTTCTGGAAAACGCTTTTACCTTTTCCTTTTTTACCACTTTAGGTGTGTTCCAGGACTTGCTTTCAAGAATCAACTTCCCTACATACAACTCAAACTCTCGGATCTCCTACCATTCACATCCACCCAAATTCAAGCACAATTCTTTCAAGTAATTAATATTTTACAAATTATATATATTTTGAATTAGAGTGTCATTTAGTAGAAAACAAGTTAACAAAGAATGGACCGATTGTCTTAAATGTTTATACAGGAAGCAGAGATTGAGGTATACGTTCACCGGAAACAAATACTCCAAAACTTTTATCGGTAACCATTTCCTAAAGTGTAACGAACATTTATATTTATTACAGATGTTGTTGATCGCAGA


Gene Sequence:
>Vu_07319(+)
ATGGCTGTCTTCATGGGGTGCAAAGAGGGAGAAATCGAACTTGGCTTCTCCAACATTCCTCAAGTAAGCAAACTATATATACACTCTCATGATATCGATGCGTCAATGGTTTTGGCATCTCATAAACTATAACTTGTATACTATTCAGGATGACATTGAGACAGCCCTTAAGAATTTATTCCCAGAAGATTTCTATATGCGTTTCCAATCAATTGATCAGAATCCATATTCATCGTCATCATCTTCTTTTATAATATCATCTACAAATACCTTTAATCAATCAATCAATGTTCCGGGAACTTCCCACTCCAACTTCCCTGATGCCCTCGGTGTGGCTCCCACACAACCGATTTCTCACCAACCATTGTCTCAAGTCATTCCATTTCCAAGCCATTTACCGACACCAGAGGGTGAACATCAAGAAATGGTAAGAGCATTAATCCGAGTCCTGTCTTCAACTTCTCAGCAGCAGCTCCATCAAGTTTTGCCTCATACTTCTGTAACACAACCTGGAGCTCCCGATGTCGTGAGATATATACCAGATATGACAAACCCAAATATAGAACCCCACACGGAGTTCAATTTTCGCAGGCAAAACCTGAAGAATACATCACTAGTGAGAGAACGCAATAGTACTGTTCAAGCAACCGATCACATCAGTACCCTGCAGCATCGCTTTCGTATGATATCGGAGAGAAGAAGGCGTGAAATACTCAAAGTGAGTTTTGAGGCACTTAGAGCAATTCTTCCTCCGGAAACTAAGGTATATGTTATAATTTAGCAATGCCAAGCATGTAGCTTTTTCATTCATGAAAAGAAAAAATTATGAAGTCATAGAAACTATGGATACACCAATCTCACCAGATGGTGATATTTATATACTTTTTTCCATACGATACAAATAAACCTGAGATAAAACATTTAAGTGCATATTTCAGGGGAATGATTAAAAAATGTCGTATTTCTAAAAGTTAGGAATTAGGTTTCTCTGGTGGGATATTTCTTGTGTCAAGCCTTTATTTTAAGTTTAAATTAATTATTAACTGTGTTTTGCTTCTACCGTGCTAACATAATGTAGTATACTACATTAATTTTGATGATACTATTGATAACTAGTTAATAGTATAATACATTATATTAGCAGATAACTTTCTTATATAAACGTGATGCCTTCAGTTTCATCAACAATATATATGGATGAAAATGTAAGTTCAAAATCAAACATTTTTTCCACTAGTAATATGACCTTTTTTGTTGTGATTCCAAAACAATCTAAGAGATTTGAATTTGGGTGGTTCAGAAAAGTAAAGCGATGATCCTGACAACAGCAAAGGGGAGAATAATATCTTTGATGGCTGACATTGAAAAGCTTAACATGAGAAAGCAGCAGCTTAGGAAAGATTTGTCAGGTGTTATGAGTGAAGAAAACAAAGGTAGGTAGGACCCCTGATGAAAGCTTGAATGTTCGAGTTTGGCATGTACCAGAATCAAGTTCGTCAGAAGAGAAAATGGTGGACTTAGAAGTGACAGTGAGAGAACAAAGCTGCGAAGTTAATGTATTGATTCTCATATTGAAATTCTTAGAAAGGATTCAGAACTTAACCTTGATTTCCACGAAAACAAACCTCCATACTACAGAAGGAGGGACAACCATTAA