Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_07318 LG1 104666624 104669440 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated
Cellular Component   located in   nucleus, nucleus
Molecular Function   enables   DNA-binding transcription factor activity, protein dimerization activity, DNA-binding transcription factor activity
SNP Position Effect Amino acid change
C/T 104666631 missense_variant p.Ala3Val
C/A 104666646 missense_variant p.Ser8Tyr
C/T 104666654 missense_variant p.Pro11Ser
C/A 104666678 missense_variant p.Leu19Ile
A/G 104666719 synonymous_variant p.Gln32Gln
A/C 104666725 synonymous_variant p.Ser34Ser
T/A 104666730 stop_gained p.Leu36*
C/T 104666747 intron_variant
A/G 104666764 intron_variant
C/T 104666776 intron_variant
T/C,A 104666825 missense_variant p.Phe42Tyr
T/C 104666964 intron_variant
A/T 104667036 missense_variant p.Asn84Ile
A/G 104667271 intron_variant
C/T 104667337 synonymous_variant p.Val116Val
C/T 104667415 intron_variant
C/A 104667447 intron_variant
G/C 104667455 intron_variant
G/C 104667678 missense_variant p.Gly197Ala
A/T 104667703 missense_variant p.Gln205His
G/C 104667812 missense_variant p.Glu242Gln
G/A 104668056 missense_variant p.Arg323Lys
A/G 104668305 splice_region_variant&intron_variant
A/G 104668483 missense_variant p.Ile403Val
A/G 104668569 synonymous_variant p.Glu431Glu
C/T 104668585 missense_variant p.Arg437Cys
G/A 104668596 synonymous_variant p.Glu440Glu
G/A 104668753 intron_variant
A/G 104668773 intron_variant
C/T 104668840 intron_variant
C/T 104668841 intron_variant
A/T 104668896 intron_variant
C/T 104668913 intron_variant
T/A 104668972 intron_variant
A/G 104668977 intron_variant
A/T 104669007 intron_variant
G/C 104669173 intron_variant
A/G 104669211 intron_variant
T/A 104669348 intron_variant
T/C 104669432 missense_variant p.Tyr503His

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_07318.1
MDAVFALSQAPRAHFLRSLIQSFACTYVSLWQHSLLSNRLFFLDGFYNALNNKPTSSQSLFHQYGALTFDVSDECVPGLAFKNQLPYIQLKLSDLLPLTSTQIQAQFFQEAGIEMAVFMGCKEGEIELGFSNIPQADIETALKNLFPEDFYMRFQSIDQNPYSSSSSSFIISSTNTFNQSINVPGTSHSNFPDALGVGPTQPISHQPLSQVIPFPSHLPTPEGEHQEIVRALIRVLSSTSQQELSHQVLPHNSVKHPGAADVVRYIPDSNINPHMESNFSRRNLQNTSFPLLKNLNSKRMRERHTIKPTHPISSQKYYHTVSERKRREKLSECFQELSALLPLGTKTNKRWVLTAAKETMRSLMVEIEELKMRNEQLMRVLSGKEVGSSREEDRGRSYNERLNIRVLHASESSSSEEQMVNLEVTVREQSSEVNVLVRILEFLERVQNVTLISTNTNLHITEGGTAINVLTFRLRIIEGSEWDEVGFEEAVRRVVADITHREFYP*


CDS Sequence:
>Vu_07318.1
ATGGATGCTGTTTTTGCCCTCTCTCAAGCTCCCAGAGCTCATTTTCTCCGTTCTCTCATCCAATCTTTTGCCTGCACTTACGTTTCTCTATGGCAACACTCACTTTTATCCAATCGTTTGTTCTTTCTTGATGGTTTCTACAATGCTCTCAACAACAAACCAACTTCTTCTCAAAGCCTTTTTCATCAGTATGGGGCTTTAACGTTTGATGTCAGTGATGAGTGTGTTCCAGGACTTGCTTTCAAGAATCAACTTCCCTACATACAACTCAAACTCTCGGATCTCCTACCACTCACATCCACCCAAATTCAAGCACAATTCTTTCAAGAAGCAGGGATTGAGATGGCTGTCTTCATGGGGTGCAAAGAGGGAGAAATCGAACTTGGCTTCTCCAACATTCCTCAAGCTGACATTGAGACAGCCCTTAAGAATTTATTCCCAGAAGATTTCTATATGCGTTTCCAATCAATTGATCAGAATCCATATTCATCGTCATCATCTTCTTTTATAATATCATCTACAAATACCTTTAATCAATCAATCAATGTTCCGGGAACTTCCCACTCCAACTTCCCTGATGCCCTCGGTGTGGGTCCCACACAACCGATTTCTCACCAACCATTGTCTCAAGTCATTCCATTTCCAAGCCATTTACCGACACCAGAGGGTGAACATCAAGAAATAGTAAGAGCATTAATCCGAGTCCTGTCTTCAACTTCTCAGCAGGAGCTTTCCCATCAAGTTTTGCCTCATAATTCTGTAAAACACCCTGGAGCTGCCGATGTCGTGAGATATATACCAGATTCAAATATAAACCCACACATGGAGTCCAACTTTAGCAGGCGAAACCTGCAGAATACATCATTTCCATTGCTTAAAAACTTAAATTCAAAGAGAATGAGAGAACGCCATACTATTAAACCAACCCACCCCATTAGTTCCCAGAAGTACTATCACACGGTATCCGAAAGAAAACGTCGTGAAAAACTCAGTGAGTGTTTTCAGGAACTCAGCGCACTTCTTCCTCTTGGAACAAAGACAAACAAAAGGTGGGTTCTTACAGCAGCAAAGGAGACGATGAGATCTTTGATGGTTGAAATTGAAGAGCTTAAGATGAGAAATGAGCAGCTGATGAGAGTTTTGTCAGGCAAAGAAGTTGGTAGTAGTAGGGAGGAAGACAGAGGCAGGTCCTATAATGAAAGATTGAATATTCGGGTTTTGCATGCATCAGAATCGAGTTCATCAGAAGAGCAAATGGTGAACTTGGAAGTGACGGTGAGAGAACAAAGCAGTGAAGTTAATGTATTGGTTCGCATATTGGAGTTCTTAGAAAGGGTTCAGAACGTAACCTTGATTTCCACGAACACAAACCTCCATATTACAGAAGGAGGGACAGCCATTAATGTATTAACCTTCAGGCTGAGGATTATTGAGGGTAGTGAATGGGACGAGGTTGGCTTCGAGGAAGCAGTAAGAAGAGTGGTTGCTGACATAACACATCGTGAATTCTACCCATAA


Promoter Sequence:
>Vu_07318::LG1:104664624-104666624(+)
CACAAATGGTTCCATCTCTAATCTTCACAAGTTGTGAACACAGAAATGCCTAAAACCATGAACTGAGAAATTGGAATATATTTGTGAACAAGAGATGATAAATATGGACCACTACTCATACTAAGACACATGTTTCCAAAAGAAAAGACATGTTTTTCAAATCAGAAAGACAACCATCAACCACACACCGGTGGAGAAAGAAAACAGCATGTTTTCTAATTACTTCATTACCACGTAAATAATTTTGGTTACGTGACATAAGGAAGAACATGTGACAATAATTTATTTTAATTTTAGTTATATTTTATGTTTTTTATATTTCAAACTTCAAAATCATAATATAATTTTGTTTTCTTTATATTTCAACAAGTGAAAACACATGCCTCTCATGTATGTTTATTTTTTTTATGATAATAGAAAATGATTAAATTATTATTATTGTTAATATTATAATTATAAAATTGAATAATTTTTATAATTTTATAAAATTAAATGATTAAACTATATATACTTATATATAAAACAAAGAAGGAGATTTCTTTTGTTGGTGTTCACTTTTTTTTCTCCACTTTTACCATTCAACTTATTGTTTTATTTAAATTTAACCATTTTCTTAAATTTAACTATTTTTTAAAATTAAATAAATAAAAATCTACAAAGTAAATAAAAATCATCTACAAAATAAATAAAACTATATATAATTAAATTGTAAGAATTATTTATATTATTTTTTGTAATTGTAATTTTATTATGTTTTATTATCATAAAAAAAATTAACACACGTATAATGAATGTGTTTACAATAATATATTTAAAATATATCCTATTACACTAATTTACTGACTCTGAAACATGTTAACTAATTAAGGGTTTGTGGTAAAAATTGTCAAAATTTATATCATCAAGTTTAATATTTGTGATTAGAGGAACTGTAATTTTGGTCTCTATATATTATAAAAGTTATAGTTTTAATCTTAAACTTTTTTTTATCATAATTTTAGTTTTTAAAATTTTTAATTATCTGTAAATTTGAGCTATAATTGTTTTTCATTCAATTTTCATTTCTTAATTAACCTTAATTAATTTTTAATTTTAAAAAGAGATCAAAATTTTAATTATTCTTTTCAAACTTGAAGAAAGTTATAAGTTGCCAGTTTTTCAATTTATAACCAATAAGTGACTTATGAATGAAGCTTTTAAAATCAAGTTAAAGTCTATAAAATATTTCTATTGTATTTAGTAAAATTTAATTGAGCAGTTTAATTGAATCACACTATATGATGGTCTATTCAGAGCAATGGAAGCAAATGGATTTGACCTAGTTTCCTGGAAAGTTTGGCAGAAGGTTCCTATGATTCCACATTTGTCAGAAAAGGAATTGCAATTTTTGAATCTTCTATCCACTATAAATAGAAATAAGTTTATAGTACAGAAATAAAAATAAATATTAATTATATAAAGTTGAATTAGATTTAAAATTTATGTTTTAGCATAGTAATTATAGTATTGGATGTCTTTCTATATTAAATTTTTTTATTTTTTAATAATATATAAAATAAATTAAAATCTCACTTTATAAAAGTTCCAATATTTTTGCATGATTGCCATTACGGAAAACAAAAGGGAAATAAGTCTTCAAAGTCTCACTAGGGTACAAGGCAATTCAGTCGCTGTCTACAAGGGAACTAATATGTAGTCCATATCTTCCAATTTAATGGACACGTTTTCAAAGAACTACTTATATTTTGACAATATTTATCAAAATCTTTGACATTTTATTCTAAAAATATATCAATAATTTAATTTAGAAAATAGAAAAACAAAATGGGATATTATTATTAATGTGGACTCTCCTTTCCCTTCACACATACAAATCAGGAATTTTATCCATCAACTGTATAAAGATAAGGTTGAGAAGTATAATGATTGAGACGATGCATAATAATATAAGTAGTAATACAAACATATTCATCATCATGCAAAACCCTTAATTAGCAACA


Gene Sequence:
>Vu_07318(+)
ATGGATGCTGTTTTTGCCCTCTCTCAAGCTCCCAGAGCTCATTTTCTCCGTTCTCTCATCCAATCTTTTGCCTGCACTTACGTTTCTCTATGGCAACACTCACTTTTATCCAAGTATATATCTCTCTTTATATTTTCTTAACTTCTACTCTTCACTAGCTATCATTTTTATTTACTTTTCTTTCCACAGTCGTTTGTTCTTTCTTGATGGTTTCTACAATGCTCTCAACAACAAACCAACTTCTTCTCAAAGCCTTTTTCATCAGTATGGGGCTTTAACGTTTGATGTCAGTGATGAGTAAGTGCTGCATTATTCATCACCATCATTCATAATCTTTCTTTCTGGAAAACGCTTTTACCTTTTCCTTTTTTTACCATTTTAGGTGTGTTCCAGGACTTGCTTTCAAGAATCAACTTCCCTACATACAACTCAAACTCTCGGATCTCCTACCACTCACATCCACCCAAATTCAAGCACAATTCTTTCAAGTAATTAATCATTTTACAAATTATATACATTTTGAATTAGAGTGTCATTTAGTAGAAAACAAGTTAACAAAGAATTCTGATAGTCTTAATGTTATACAGGAAGCAGGGATTGAGGTATACGTTTTTATCGGAAACAAAAACTGCAAACCTTTTATCGGTAATCATTTCCTAAATTGTAATGAACATTTATATTTATTACAGATGTTGTTGATCGCAGATGGCTGTCTTCATGGGGTGCAAAGAGGGAGAAATCGAACTTGGCTTCTCCAACATTCCTCAAGTAAGAAAACTACACTCTCATGACATCGATGCGTCAATGGTTTAATCATTGTTTCCTCAAGTTGGCATCTCATAAACTATTAACTTGTGTACTATTCAGGCTGACATTGAGACAGCCCTTAAGAATTTATTCCCAGAAGATTTCTATATGCGTTTCCAATCAATTGATCAGAATCCATATTCATCGTCATCATCTTCTTTTATAATATCATCTACAAATACCTTTAATCAATCAATCAATGTTCCGGGAACTTCCCACTCCAACTTCCCTGATGCCCTCGGTGTGGGTCCCACACAACCGATTTCTCACCAACCATTGTCTCAAGTCATTCCATTTCCAAGCCATTTACCGACACCAGAGGGTGAACATCAAGAAATAGTAAGAGCATTAATCCGAGTCCTGTCTTCAACTTCTCAGCAGGAGCTTTCCCATCAAGTTTTGCCTCATAATTCTGTAAAACACCCTGGAGCTGCCGATGTCGTGAGATATATACCAGATTCAAATATAAACCCACACATGGAGTCCAACTTTAGCAGGCGAAACCTGCAGAATACATCATTTCCATTGCTTAAAAACTTAAATTCAAAGAGAATGAGAGAACGCCATACTATTAAACCAACCCACCCCATTAGTTCCCAGAAGTACTATCACACGGTATCCGAAAGAAAACGTCGTGAAAAACTCAGTGAGTGTTTTCAGGAACTCAGCGCACTTCTTCCTCTTGGAACAAAGGTATATATACCAAAATTTCAATTCACAAAGCAACGTCATGGTTAACTAGGATTAAGTTTATATTTATCTGTGATGATGCTATATTTGTTATCCAAACTGTACCACTATTAATAATTAATGATGCGTTAACATAATTTTTAATCAGTAATTAATGCATTTAGCACTTGGTTTGAACTTTGGTAATCTAGACAAACAAAAGGTGGGTTCTTACAGCAGCAAAGGAGACGATGAGATCTTTGATGGTTGAAATTGAAGAGCTTAAGATGAGAAATGAGCAGCTGATGAGAGTTTTGTCAGGCAAAGAAGTTGGTAGTAGTAGGGAGGAAGACAGAGGCAGGTCCTATAATGAAAGATTGAATATTCGGGTTTTGCATGCATCAGAATCGAGTTCATCAGAAGAGCAAATGGTGAACTTGGAAGTGACGGTGAGAGAACAAAGCAGTGAAGTTAATGTATTGGTTCGCATATTGGAGTTCTTAGAAAGGGTTCAGAACGTAACCTTGATTTCCACGAACACAAACCTCCATATTACAGAAGGAGGGACAGCCATTAATGTATTAACCTTCAGGCTGAGGATTATTGAGGTATGTTCCAAGAAACATTCCACGACGTAACATGTTCAGACATTTGCTTTGTCATTTGTGTGTGTACAGGGTTTTCATATCTCTACATGATCCAAATGTGAGTAATTTTATGAACCCCTAATGCTCGTAAAACCTAAACATATAAATAAATAAATATAAAACCGTCAATGAACGTTATGAACATCTCAACCGTAATTACAACCACCGGATCTTCGGTCTCCACCTTAATGGAGACGGCAGCTATGGAGTAGGGTTTCGCAGCAATGGTCAGGAAATATAATTTGCAGAAGTAAAAACCCAGATCATAAAAGCTACAAAGTTTTAACTTTTATGATGCAAAATTTACACAAACTTATTAATATATTATATATGACTTGTAAATATTAACTGGTTGTAATCATATCCAGTATTTATTTTTATTCAACAAAAGAATTTCTTATTTCATCTCTATTTTAAAAACTTCACGTACGGTAAATATCAAACTATCCATATCATAGACATACAAAGATAAATGGTATTTTTATAACTTATTTCAATACAAAACCCACTTTTTGCATTAATATGAATTATAAAATTTGAATGAAGTTTTAACTGATAATTAATATAAAAAGGTATTGGGAAGAATAAGAATAATGGTGTGTATTTTCAGGGTAGTGAATGGGACGAGGTTGGCTTCGAGGAAGCAGTAAGAAGAGTGGTTGCTGACATAACACATCGTGAATTCTACCCATAA