Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_07308 LG1 104511066 104512303 PREDICTED: GATA transcription factor 21-like
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/G 104511129 synonymous_variant p.Pro286Pro
T/A 104511408 splice_region_variant&synonymous_variant p.Ser193Ser
T/A 104511424 upstream_gene_variant
T/A 104511426 upstream_gene_variant
T/A 104511431 upstream_gene_variant
T/A 104511516 upstream_gene_variant
A/C 104511518 upstream_gene_variant
A/G 104511521 upstream_gene_variant
A/T 104511522 upstream_gene_variant
C/T 104511524 upstream_gene_variant
G/T 104511740 missense_variant p.Pro151Gln
C/G 104511920 missense_variant p.Arg91Thr
T/A 104511926 missense_variant p.Lys89Met
A/G 104512223 synonymous_variant p.Thr27Thr
A/T 104512250 missense_variant p.Asp18Glu
C/T 104512255 missense_variant p.Glu17Lys

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_07308.1
MIPAYRHSSVIPLDLNEDQNHELFTPTYHAYPSFSYLSSSYPVLFNPPDQEDGSHSWEPTKHLSGHEEAEKINPTMGSWDHSVAQSELKVRVCKQKERSEDHEAAAEDGSVKLMSSKMRMMQKMMGSDQTGAYIEDSTVNKFEDEKQPLSPLGTDNSSSNNCSNHSNNTVRVCADCHTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAAAASGNGTVIFETEKSVKGNKLQKKEKKARTQGAPQMKKKRKHGVGAKPSQSRNKFGFEDLTLRLRKSLAMHQVFPQDEKEAAILLMALSYGLVHG*


CDS Sequence:
>Vu_07308.1
ATGATTCCAGCCTATCGCCACTCTTCTGTGATTCCTCTGGATCTTAATGAAGATCAAAACCATGAGCTCTTCACTCCCACTTATCATGCTTACCCTTCTTTTTCTTATCTATCTTCATCATATCCCGTCCTCTTCAACCCTCCAGATCAAGAAGATGGATCACACTCCTGGGAACCAACAAAGCACTTATCAGGTCATGAAGAGGCTGAGAAGATTAACCCTACCATGGGATCATGGGATCACTCGGTTGCACAAAGTGAGCTCAAGGTGAGAGTTTGCAAGCAGAAAGAGAGGAGTGAAGATCACGAAGCAGCTGCTGAGGATGGTTCGGTGAAGTTGATGTCTTCAAAGATGAGAATGATGCAGAAGATGATGGGGTCCGATCAAACTGGTGCATATATAGAAGACAGCACTGTGAATAAGTTTGAAGATGAGAAGCAACCATTATCACCGCTTGGAACTGATAACAGCAGCAGCAACAACTGTTCAAACCACAGTAACAACACTGTTAGGGTTTGTGCTGATTGCCACACCACTAAGACCCCTCTTTGGAGGAGTGGACCAAGAGGCCCCAAGTCACTATGCAACGCCTGTGGAATTCGACAGAGGAAGGCGAGACGAGCCATGGCAGCTGCAGCATCGGGAAATGGAACAGTGATTTTTGAAACTGAGAAGTCTGTGAAGGGAAACAAGTTGCAGAAGAAAGAGAAGAAGGCAAGAACTCAGGGTGCACCACAGATGAAAAAGAAGCGCAAGCATGGAGTTGGAGCAAAGCCATCTCAAAGCAGAAACAAGTTTGGTTTTGAGGATTTGACATTACGCCTAAGAAAGAGCTTGGCTATGCATCAAGTTTTCCCTCAGGACGAGAAGGAGGCTGCGATCCTTCTTATGGCTTTATCTTATGGCCTTGTTCACGGATGA


Promoter Sequence:
>Vu_07308::LG1:104512303-104514303(-)
ACGTCTTTCTTAGACATTGTTAGATTTTTTTACAGTTTTAAATCTGACAATTTTAACTGTTCTTTTTTAATACATACCATAACGCCAAAGATTAAAAATACTATTTTCTATATTTTGAAACTCTAATTTATTAATTATTTTTAATTTTTAATATTATAATATATTTTATTTAAGTGAATAACATTAAATTATTAAATGTCAACTTTGCTACAAAATTTTCTTCTTACATTAGTATTTTTTTAAAACTCAAATATTATACTTACTCTAAAGCTAAAGGACTGATAAATGAACCTTTTCACTTAGAAAAGAATGTAAGTAGATTTGTTAAAGAGGTATATCGCTTGAATGAAAAATAGCCTAGATCAAAGTCTTCACGTGTGTTTTTCCACTAGGTCAGCTCGTGATATTCTAAAGAATCCTAAGTGCGTCACCGTGTGAATGATTGTTCACCATTTACTTAGATTGGTTAAAACTTTGACTTGTGATCTGTATGAAGAGAAGGAAGCATTTATACTTTGCACAGTGATGAGCATGGTGTGATGCCACAGTTGATGATTTGTGTTGTCTATAGGAGAAAAAAGGGAGACGGCGCTAGACAGTGTTGAAACGGGAGTGGTGCCTCCCAAAAAATATTCTCATTTTGTGTTGGGTTCTGTCCATTTGCCTGCGCCAGCATTCAATGCTTTTTGGCAATGCACATGCAAAGAAGTGTTTCACTTCTCATGCATCATTTTTCTTTCTTTCTTTCACCTTGTTCCAGCTCCAATCAAGAAAAAAAATAGAGGCTGAAGGTTAGTATATTCTGATCCAACTATCTAAAGCAAAGACTCCTTTCTTATTGGTAAAAACTTTCTGCAGATAAGGTTCTGTCATACCTATGGGGTCACCGTATGTAGCATTTCACACACTCCATTTTTTTTGTCTCTTTAACTTTGTCTCTTTAGGTGTCATGAAGTCACGTGAACTTCTTATAGCGATGGTTTTAATTTCTTACCGTCCTTCTAAGTTTAATCTTTCCTTTTACCTCATAGTTTTTAATTCATAGTTTTCAATATTAATACTTATACCATACATTTAAGTTTTGCAATTATAAAAAAAGTTACTTTTAGCTATTTATCATTATAAATTTACAAATATTGTAATTTAGAATTATCTAGTAATGTCTTCTAACGAAAGGTATATCGGAAAACCTATCCAGGAGTAAAATTTTCATATATTATGTGTTTTTAATATTCTTATTATTTTGATTGTGTAATCTCAATTCGTCCATTAACTGGACAAACTGTAGTAATAATGGTGTGTCATGGCATCCAATGAGTGTGTCAATTTGCAACATACATAAATTTGTGAGAGGACATAGTTTTGATTTAATTTATGAATGTTTTTGAAAGGAGTGGTTAAGTTTCTCTAAAGTATAAAGTATCTCATTCTCACTCGAAAATCAAGACTAGATATAATGGATAAATTAAGAAAAATCATATTATTAAAACAGTAAAAGTGTATATTTGGAAAATTAGATTAAATTTGCGGAACAAAAACGAGAAATTATGTTATTTTCTACTGTGACAACTTAACGAGTCAAATATACGAAGATTAGTTTATGAATGAGTGGAGTTAAAATAATAATATAAAATAAGATGCAAATACTTAATTGAATTGTATCCATTTAATTTAGTATTACAAAAGAAAACAAAAAATATGGTGAACAATAAAAGATCATATACGGTATACATTCAAGTAGTATATGATGATGTAAACTTATCCCTGTGGTTTCCGTTCTTTATAAGAGTAGCGTTAGGAACTGTTCGCCATTTCCTTTCTCTCTTTCTTCTCTCTCTCTCTCTCTCTTTCTCTAAATCCTCTTCCACCTTTGTATTGGACAAAAGGAAAACCGTTTCAGTTTGCAGATTGCGCTGATCCCTTTCTCTTTCTCTCTCCCCCTTGGATTTCTTTGTGGCTTGGTTTGTCGTGTGTGCCTGTTTTTTATGTGAGCTTCCAGC


Gene Sequence:
>Vu_07308(-)
ATGATTCCAGCCTATCGCCACTCTTCTGTGATTCCTCTGGATCTTAATGAAGATCAAAACCATGAGCTCTTCACTCCCACTTATCATGCTTACCCTTCTTTTTCTTATCTATCTTCATCATATCCCGTCCTCTTCAACCCTCCAGATCAAGAAGATGGATCACACTCCTGGGAACCAACAAAGCACTTATCAGGTCATGAAGAGGTGAGACATACTTGTACTAATTGAGATTCACATATATATTTATAATCTTTATGATCAGTATGATATTGTATTATATCTTCTTGTTAATTTTGATCATGCCATCTTTATCTAGGCTGAGAAGATTAACCCTACCATGGGATCATGGGATCACTCGGTTGCACAAAGTGAGCTCAAGGTGAGAGTTTGCAAGCAGAAAGAGAGGAGTGAAGATCACGAAGCAGCTGCTGAGGATGGTTCGGTGAAGTTGATGTCTTCAAAGATGAGAATGATGCAGAAGATGATGGGGTCCGATCAAACTGGTGCATATATAGAAGACAGCACTGTGAATAAGTTTGAAGATGAGAAGCAACCATTATCACCGCTTGGAACTGATAACAGCAGCAGCAACAACTGTTCAAACCACAGTAACAACACTGTTAGGGTTTGTGCTGATTGCCACACCACTAAGACCCCTCTTTGGAGGAGTGGACCAAGAGGCCCCAAGGTACACCTTATCTTAAAACACAAATCCCAATATTGGATCCGTACTTAACTATTTTCGAACTAAATATCACTACCCTTTTTATCAATTTTTAGTTTAATCACACCAGTACCCAACTAATCATTCAGCTCTTTACTACTCAATAAGTAGAATTAACTAGAATATTGTTATATATTATGTTGAAATTAAATTAAATTTTTTGTGACAGTCACTATGCAACGCCTGTGGAATTCGACAGAGGAAGGCGAGACGAGCCATGGCAGCTGCAGCATCGGGAAATGGAACAGTGATTTTTGAAACTGAGAAGTCTGTGAAGGGAAACAAGTTGCAGAAGAAAGAGAAGAAGGCAAGAACTCAGGGTGCACCACAGATGAAAAAGAAGCGCAAGCATGGAGTTGGAGCAAAGCCATCTCAAAGCAGAAACAAGTTTGGTTTTGAGGATTTGACATTACGCCTAAGAAAGAGCTTGGCTATGCATCAAGTTTTCCCTCAGGACGAGAAGGAGGCTGCGATCCTTCTTATGGCTTTATCTTATGGCCTTGTTCACGGATGA