Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_07291 LG1 104373317 104374665 PREDICTED: probable WRKY transcription factor 17
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/A 104373426 missense_variant p.Leu37His
T/A 104373473 missense_variant p.Ser53Thr
G/A 104373501 missense_variant p.Arg62His
T/C 104373667 synonymous_variant p.Ala117Ala
C/T 104373886 synonymous_variant p.Leu190Leu
G/A 104374195 missense_variant&splice_region_variant p.Arg268His
T/A 104374399 intron_variant
G/A 104374407 intron_variant
G/A 104374573 missense_variant p.Met287Ile

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_07291.1
MAVDLAGVAKIRMEEQTAIEEAASAGLKSMEHLIRVLSSQIPSSSASASASASSSSSTHHHRLNLNHLDCTEITDFTVSKFKQVINLLNRTGHARFRRAPSHSSPSPSLPSPPQPHAQKLTLHFANPKVKSNPNPNPNPSFTDLSVSQYSKTKDTTFSISPPISTTTSSFMSSVTADGSVSDGKIGPAILASGKPPLSSSHRKRCHDATLSAGKTSSSAHCHCSKRRKSRMKRMIRVPAISSKIADIPADEYSWRKYGQKPIKGSPYPRLFKRRVDRESVRPTVMSDERCLQLTEEVVTVCCNSERKRKEVLASKGK*


CDS Sequence:
>Vu_07291.1
ATGGCAGTAGATCTGGCAGGTGTTGCCAAGATTAGGATGGAAGAACAGACAGCCATCGAAGAAGCAGCTTCCGCTGGATTGAAAAGTATGGAGCATCTCATTCGTGTTCTTTCCTCCCAAATCCCTTCCTCTTCTGCTTCTGCCTCTGCCTCTGCCTCCTCCTCTTCTTCCACACACCACCACCGTCTTAATCTCAACCACCTTGACTGCACCGAAATCACCGACTTCACTGTCTCCAAGTTCAAACAAGTCATCAACTTGTTGAATCGCACTGGTCACGCTCGCTTTCGCCGCGCACCTTCTCATTCCTCCCCCTCCCCCTCTCTTCCTTCTCCGCCGCAGCCACACGCTCAAAAACTCACTCTTCATTTTGCAAACCCCAAGGTCAAGTCAAATCCCAATCCCAACCCCAACCCTTCTTTCACGGATTTGTCGGTTTCTCAATATTCCAAGACCAAAGACACCACCTTTAGCATATCCCCTCCCATCTCCACCACCACCTCCTCCTTCATGTCCTCTGTCACGGCAGACGGCAGCGTTTCCGACGGCAAGATCGGCCCCGCCATCCTCGCCTCCGGGAAGCCTCCTCTCTCCTCATCCCACCGTAAAAGGTGTCACGACGCCACCCTCTCGGCCGGGAAAACCTCATCCTCCGCCCACTGTCATTGCTCCAAGAGAAGGAAATCTCGTATGAAACGAATGATTCGAGTGCCGGCGATAAGTTCGAAGATCGCCGATATCCCTGCGGATGAGTACTCGTGGAGAAAGTATGGTCAAAAACCCATCAAGGGGTCACCCTACCCGCGGCTGTTTAAGCGACGGGTAGATCGAGAAAGTGTGAGACCGACAGTGATGAGTGATGAGCGCTGTTTGCAATTAACTGAGGAAGTTGTAACGGTGTGTTGTAACAGTGAGAGAAAAAGAAAGGAAGTTCTTGCAAGCAAGGGAAAGTAA


Promoter Sequence:
>Vu_07291::LG1:104371317-104373317(+)
TTGAGGAAAGCACAAAGGTTTAGTTTTCTCCAAGGTTGCAAGAAATGATGAACAAAACACTGGCTAATGGTTGTACAAAAAACGTTGAAAACAATATTGTAGCATATATAAAAACAACGATCGTAAATGTCAACCAAACTTTAATGAAGTTTTGTACGTTGGGCTTCACCTTCTCACCACCAACACGGACTCTGGCTACTTAGATGCCATCTTGTTGACCAAAATACAAAAGTTAGATGCCATCTCCCACCTCTCAATTATTAGCGTTTTCTTTTATTTAATAAAATGGAGATAGTGTACATGTGCGCATGAAAGCATATTAATTATTAGCATAGAATAGAAATATTATCATAGAATAAATTCCTATTAAATATCAACTCTCCAGATCAAATAAAATCAAATAATGTGTATTACTTTCTACGGTGTTAATCCGCGTATTTTAAAACCATCAAGAAAAAATATTTCTATTATATTCCCATATGCGTTGAATTAGAGTGACAAAGAGATTCGGACATGATTTTTTTAGGGTAAACACCATGATAATGTTTATATTCCTGGGTGTTGTGGCTGACCAAAGTAGGCATTGACCTAACACAAGGAATCAAGTTGAGTAAGCTTTCTTACTTTTTTTTCTTCTTTATTGAAACTACACGCATTACTTTTTTCATCGTATTGGGAATCCACGTTAAAATTCAAAATTAAAGTTCCATTCAGTTGCGATCACCATCGATGGATGGTCAACCATTCACAAAAGGACAAAATGGAAAAGGTGAAGGGCGAAACTTCCGAGGAAATCGACATAACTTTATAATATATTTTATCAGTGGAATACACTCGGTGGTATCATGGTATACGTATACGGTAACTAATTAATGCCAAAGTCTACGGAAGTCAACAAGAAAATAGCCTCTTCACTTTTGAAGGAACAATCTTGATTTTCGTTAAACCTCAAAAGCCAAATTCAGAAAACTAATAAACATAAGTGATTTATAGTAGAACTCAAATAGCCAAATATTTGCATCAGTTTCCTTTCTGTGTGCTAAGCAGGACACTAAAGTCAAAACTCATCACAAACTTGTCGTAATAATAACAATGAAGTGGTAGATACGAAATAACATCTAAGTTGTTTTCAATATTAATACAGTATAGTTAGTGCATGAATGCGCTTGAAAATGACAAGATTCTACACACAAGTGCGGCCTTTACATAAACTAATGGTATGCTTAGCCAAAGAGAGAAATAAAGAAAAAACAAAACAAAAGAAGATAATAGCCAAAACAAAAAAATTAGTTTTTTTCTATACTTCGTTGTCTTCCCCCACAGTTTCAACTTTCCAATACAGTGAAAGTTGATGGGCATAGTTATGTTTAAAAGATAAATGAGATATTAAAATGAAAAAATAAATAATTTGTTTTCCCTCTCTTGATTGAGGAAAGTAGGAAAGTAGTAAGTAAAAACAGTAGATGCAATGGCGTTGACCGGGTTGGTTGCTTGGGGTGGGGAAATACTTGAAGACATTAATCTGTTTGTATAAAGGAAGTTGGTGCCTTGACGGTGATGATTTTTTTTCTGCATTTTAATTTAAATTTTGTATGGTGAAGATTGGTTGAATGGTTTGGGAATTTCCCTGGGGGCTTCCAAAGCAAGAAGTGGTGGGACACAGCATCCAGTCCTCCTTTGGAGCTTTACAGTGAGTAAACATTGTGTTTTGTCGCGGCACGCCTTTTTGTGTTATTATTAACAATAGTAATAAATAATGGCATCGGTGGAATAAAAAAGTGAGATTTCTAAACAACATTATTCTGGCCATTACTTCAATTTGCATGCAAAAGCAAAGTCCAACCAATATCCACGCTTCCATTGACGAAGCTTCGTTGACTTTCTCATCCACCCTCTCTTTTATAACCAACCCCCTTCCCCTCTTCTTTCTTCCATCCAAACCAAACCCACACAAAAAACCAAACCAACGCCAACGTAGTCTCTCTCTCTCCAACCCTCCA


Gene Sequence:
>Vu_07291(+)
ATGGCAGTAGATCTGGCAGGTGTTGCCAAGATTAGGATGGAAGAACAGACAGCCATCGAAGAAGCAGCTTCCGCTGGATTGAAAAGTATGGAGCATCTCATTCGTGTTCTTTCCTCCCAAATCCCTTCCTCTTCTGCTTCTGCCTCTGCCTCTGCCTCCTCCTCTTCTTCCACACACCACCACCGTCTTAATCTCAACCACCTTGACTGCACCGAAATCACCGACTTCACTGTCTCCAAGTTCAAACAAGTCATCAACTTGTTGAATCGCACTGGTCACGCTCGCTTTCGCCGCGCACCTTCTCATTCCTCCCCCTCCCCCTCTCTTCCTTCTCCGCCGCAGCCACACGCTCAAAAACTCACTCTTCATTTTGCAAACCCCAAGGTCAAGTCAAATCCCAATCCCAACCCCAACCCTTCTTTCACGGATTTGTCGGTTTCTCAATATTCCAAGACCAAAGACACCACCTTTAGCATATCCCCTCCCATCTCCACCACCACCTCCTCCTTCATGTCCTCTGTCACGGCAGACGGCAGCGTTTCCGACGGCAAGATCGGCCCCGCCATCCTCGCCTCCGGGAAGCCTCCTCTCTCCTCATCCCACCGTAAAAGGTGTCACGACGCCACCCTCTCGGCCGGGAAAACCTCATCCTCCGCCCACTGTCATTGCTCCAAGAGAAGGTAAAATTCATTTCACATCCGCTTCAATCAATTTCAAACTAAAGGAAAAAATTAATTTTTTTCGCCTTTCAACAGGAAATCTCGTATGAAACGAATGATTCGAGTGCCGGCGATAAGTTCGAAGATCGCCGATATCCCTGCGGATGAGTACTCGTGGAGAAAGTATGGTCAAAAACCCATCAAGGGGTCACCCTACCCGCGGTATTTTTCTATTCTTATCCTTCTGTAGAATTGAATCCGTCAAAGTCAAACATTAGTTTCCACGCCTTTGAACTTTGGAACCCTCGAATGATAGTATTATTTTATTTCTAAGTTTGTCGGAGATTAATTAATTTGTTTTTGGTAATGGCAGAGGGTACTACAAGTGCAGTAGCGTGCGAGGGTGTCCGGCCAGAAAGCACGTGGAGCGAGCCCAGGATGACCCTAACATGCTCATCGTTACCTACGAGGGAGAGCACCGTCATCCGCAGCCGCGTCTGCCGGAAGCTGGCGTGCCCGGCCCCGTGGCTTTCGGTGCTCAGGCTGTTTAAGCGACGGGTAGATCGAGAAAGTGTGAGACCGACAGTGATGAGTGATGAGCGCTGTTTGCAATTAACTGAGGAAGTTGTAACGGTGTGTTGTAACAGTGAGAGAAAAAGAAAGGAAGTTCTTGCAAGCAAGGGAAAGTAA