Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_07240 LG1 103681125 103685153 PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   cell wall polysaccharide metabolic process, cell wall polysaccharide metabolic process, protein phosphorylation, phosphorylation, phosphorylation, cell wall organization or biogenesis, protein phosphorylation, cell wall polysaccharide metabolic process, protein phosphorylation
Cellular Component   located in   nucleus, mitochondrion
SNP Position Effect Amino acid change
C/T 103681203 5_prime_UTR_variant
A/G 103681269 5_prime_UTR_variant
C/A 103681377 5_prime_UTR_premature_start_codon_gain_variant
G/A 103681379 5_prime_UTR_variant
A/G 103681662 intron_variant
T/C 103681681 intron_variant
G/A 103681684 intron_variant
T/A 103681698 intron_variant
G/T 103681735 missense_variant p.Gly73Trp
G/T 103681772 missense_variant p.Gly85Val
C/T 103681872 synonymous_variant p.His118His
T/C 103682016 intron_variant
T/A 103682074 intron_variant
A/T 103682240 missense_variant p.Asn193Ile
A/T 103682401 missense_variant p.Asp206Val
T/C 103682441 synonymous_variant p.His219His
C/T 103682447 synonymous_variant p.Ser221Ser
C/T 103682455 missense_variant p.Pro224Leu
T/A 103682496 intron_variant
A/G 103682499 intron_variant
T/A 103682731 intron_variant
A/C 103682876 missense_variant p.Lys277Asn
T/A 103682881 missense_variant p.Ile279Asn
G/T 103682970 missense_variant p.Ala309Ser
C/T 103682971 missense_variant p.Ala309Val
A/T 103683247 intron_variant
A/T 103683280 intron_variant
C/T 103683294 intron_variant
T/A 103683309 intron_variant
G/T 103683329 intron_variant
C/T 103683489 intron_variant
C/T 103683602 intron_variant
T/C 103683967 intron_variant
A/C 103684023 intron_variant
C/T 103684259 intron_variant
T/C 103684281 intron_variant
C/A 103684311 intron_variant
G/T 103684350 intron_variant
G/C 103684453 intron_variant
G/A 103684485 intron_variant
C/G 103684653 intron_variant
G/A 103684906 synonymous_variant p.Glu347Glu
T/G 103684964 missense_variant p.Ser367Ala
C/A 103684965 stop_gained p.Ser367*
C/G 103684982 missense_variant p.Leu373Val
T/C 103685002 synonymous_variant p.Thr379Thr

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_07240.1
MRYIRSNSFKRFFSFGRRSSREQVLSPNGGESHETLPSKEEPSGRPSWKCFSYDDLFDATNGFSSENLVGKGGYAEVYKGTMNGGEEIAVKRLTRTSRDERKEKEFLTEIGTIGHVNHSNVLPLLGCCIDNGLYLVFELSSRGSVASLLHDEKLPPLDWKTRHKIAIGTARGLHYLHKGCKRRIIHRDIKASNILLTKDFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYYLHGVVDEKTDVFAFGVFLLEVISGRKPVDGSHQSLHSWAKPILNKGGIEELVDPRLEGAYDVTQLKRFSFAASLCIRASSTWRPTMTEVLEIMEEGETDMEKWKMPEEEEEEEEEEFWGFEDLEYEYDSSFSMSLLDSIGSTG*


CDS Sequence:
>Vu_07240.1
ATGAGGTATATTCGGAGCAACAGCTTCAAGAGGTTCTTCTCCTTTGGAAGACGTAGTTCAAGGGAGCAAGTTCTGAGTCCTAATGGTGGAGAAAGTCACGAGACTCTTCCGTCTAAAGAAGAGCCTTCTGGAAGACCCTCTTGGAAGTGCTTCTCTTATGATGACTTGTTTGATGCCACAAATGGCTTCAGCTCAGAAAATTTGGTTGGAAAGGGAGGGTATGCGGAAGTGTACAAGGGGACAATGAATGGGGGAGAAGAAATTGCTGTGAAGAGACTCACAAGAACTTCGAGGGACGAGAGAAAGGAGAAAGAGTTTTTGACAGAGATTGGTACAATTGGTCATGTGAACCACTCCAATGTGTTGCCTCTTCTGGGGTGTTGTATTGACAATGGCCTTTACCTTGTTTTTGAGTTATCTTCTAGAGGTTCTGTTGCATCCCTTCTTCACGATGAAAAGTTGCCCCCTTTAGATTGGAAAACGAGGCACAAGATAGCCATTGGAACTGCTCGCGGCCTCCACTACTTGCATAAGGGCTGCAAAAGGAGGATAATCCACCGGGACATTAAGGCATCAAACATTTTGTTAACAAAGGATTTTGAGCCACAGATATCTGATTTTGGACTAGCAAAATGGCTTCCATCTCAGTGGACTCATCATTCCATTGCCCCAATAGAAGGGACATTTGGACATTTGGCCCCAGAGTACTACTTGCATGGAGTTGTGGATGAGAAGACAGATGTGTTTGCCTTTGGTGTGTTCTTGCTGGAAGTAATCTCTGGCAGAAAACCAGTGGATGGGTCACACCAAAGCTTACACAGCTGGGCCAAACCAATTTTGAACAAGGGTGGGATTGAAGAGTTGGTAGATCCAAGGCTTGAAGGGGCTTATGATGTTACACAGTTAAAAAGATTTTCCTTTGCTGCATCTCTCTGCATTCGAGCTTCTTCGACTTGGCGACCCACCATGACTGAGGTATTAGAGATAATGGAAGAGGGAGAAACAGATATGGAAAAGTGGAAAATGCCAGAAGAAGAAGAGGAGGAGGAAGAAGAAGAATTCTGGGGATTTGAGGATCTGGAATATGAATACGATAGCTCATTTTCTATGTCATTACTTGATTCCATTGGAAGCACTGGTTAG


Promoter Sequence:
>Vu_07240::LG1:103679125-103681125(+)
GACATTTTTAGATGTTTATGTGTCTTCTTGAAGTGCCTTCGCTTGTCTCTATAGCCTCTCTGCATAACTGAGTCACGACGAATCTTTACATGTCCTGGCATAACTAGAAAAAAATATTAATGAAAATAAATCGCATCACCATATATATTATGTGCCTAAACCACTGAACAGAAAAAAAAATATCAATGCACATCCATTTGTCTTATAATAGTATTAAAGTAAAATCACGGGAAGTTCAAATGATTTAGTGATGTTGCCTGTTGTATATATAAGACATCATCAACATCAAGAGGGTATAGATTAGATAATTTGGTTAATGATAAACAAATGACATGTTCTTTTGTTACTTGAAAGGAGCACATGCATTGCCAAGAACGTACTATATCCAGTGCTGTTATTAGCTAATGATGATCATGTAGAATCTTTAAGTTTGGTGGTAGTGCGATTACTTTGATTATTCTGTAACACTGCTGAGTTTAAGAAGGAAAAAAGGATCTTTGATTTAACTGCTTCACATCTAAAGGGATTAGGTGTTTATTCATCCACTGTTTAAATACATTCAACGACTCAGATTTTCTGGTTTATTTATGTTTCTTTGTGAAGACGGTTTAATATATACACCAGAGGGTACGAGTTCTTCATCCCAAAACAAGATTGTACAGTTTCTTCATGTAGCATTAGTTTCGTTTTTGGATTAATAATTTGTCACATGCTCTTAAGACCCACCTAATTATGGACCGTGGCACATGGAACCGTTACATTATCAACATCAATTTTCCAGTTTTCAAAAGAGCTAAAAACATCCAAATCCAAACAGTAGTGAACTAACTCCTCCGGTGGAATTCATTATAGGATAACCTACCTTTTGTGATTCTTCAATGTGATATAAATTTAAAGAATTTATTAAAAAAAGTTTTACTTTGATTTCTGATTCACCTTGGATAGATTCTACTTTTATGCTTACTGCACCATTAAGAACGGTTCTTAATGTTCTTGTAAAAAACAAAATTTCTACTCAGCATTCAACTCACCTTTCTGTAATGAAAGAAATTTTCAAATTTCAAAAGTATGTATAATGAAGTCAATATTTTCTACTAGTTTTTTTTGTGCTGTAATACTGAACATTAAAAATACATTATACTGATATTTTAAAAGTTCTTTTAATATGTTTTAAAATTTCAAAATTAATGACTATGAGTATATTTAGAAGGCATAATAGAGCAATAACACAGAAAAACTTAAGATTTCATTCCTGATGGCACAGACATCAATCCTTTTTGAGTTTATAAAGTGAATTTTACGTTTTAAATGACAATTAATTTTAATCCCGTTTGGACTAATCTCATTGTAGGGTTCACATTTCAGAAAATGGAGTTATGGAGCGGTGACACAATAAATATAGCTTTTAACATAAACGTGGTCTGAAAATAATTTGACATAATAAAAACTACTTTTTCATTAGAACTCGTTTTCCATCATAAATGCAGAGTAGTTTACCTGAACCAAATGCCTTAGTTGGATATGGCCATCTACTGTAGCACCAATAGTAGCACACTCAGAGCTGACACATGGAATGAGGGTTCCCTCCAAATTTTCCTTTTTTAATATAAAAACATGAATGTATAAGGAAAATAAATCACAAGAAAAATATAAAGGCGAAATTCAATTAGATGCACAGATACATTTTTTTGTTCTTTAATTATGTTATCCTTAACTAGTTCTTAACTTGAGGTGGAGAAATTATTTAAGAAATTCACTTTCATTACATCAGCAATGGAAGAAATAGTCATGGAACACGCATGTCTAACTTCTAGATGGGATTAAGAATGACAGAGATATTTGATAAACTTATGTTACTATTACATTTGTGAAAAGCACGGGTCACTACTGGTGGCAATTAATTAGGTGAATTAACAAGATTCAAAGCAAATTAAGCAGAGAGGAAAGATAATAGGGGTGAGGCTATCCTATAAGAACCAAAATCGCAACCTCTTTATTCA


Gene Sequence:
>Vu_07240(+)
AATCCATATTTTTCTTTCTTCCTACTCTTCTCTCCACAGTTTAAGTTTTCTTGCCATTTGTATCTACAAAAGTTATCACAGCATAGCATGGATGGTATTGGAGAAAAAGCATTTCAGCTTCTCTAATGGTCCCTCCCTAGTACAAGGCACTTCTTCACAACACAACTTTTCCGAAGAAAACAAAACCTAGGAGAGCGCTTGTGGTCTCTCTATGTATGTGAGACCCAAACGTGGAGTTGCTTCTCTTGTTCTCTGTTTTCAATTGCTCTGCTCTGCATGAAACAGAGTACCCTGTTGGATTGTTTTTTGCAATGAGGTATATTCGGAGCAACAGCTTCAAGAGGTTCTTCTCCTTTGGAAGACGTAGTTCAAGGGAGCAAGTTCTGAGTCCTAATGGTGGAGAAAGTCACGAGACTCTTCCGTCTAAAGAAGAGCCTTCTGGAAGACCCTCTTGGAAGTGCTTCTCTTATGATGACTTGTTTGATGCCACAAATGGCTTCAGCTCAGGTAATTCAGGTTTGGTTTGAAAAATTAAGTACCTTTTTTTTTTTTTTGCTTTGTTAAAGTTTTTTTTTTTATTCTTGTGGCAGAAAATTTGGTTGGAAAGGGAGGGTATGCGGAAGTGTACAAGGGGACAATGAATGGGGGAGAAGAAATTGCTGTGAAGAGACTCACAAGAACTTCGAGGGACGAGAGAAAGGAGAAAGAGTTTTTGACAGAGATTGGTACAATTGGTCATGTGAACCACTCCAATGTGTTGCCTCTTCTGGGGTGTTGTATTGACAATGGCCTTTACCTTGTTTTTGAGTTATCTTCTAGAGGTTCTGTTGCATCCCTTCTTCACGGTAATTCCTAAACCAACATCAGCCATAAACAAATATTTTGTTTTCTTATAAAGATTGAAATTTTGGCAGCAAAAAATTGAATGCATTCTGGGTTTAACGAAATATAAATAAGGGTTTTTACCGGTGGATGGGTTTTCTTTGTAGATGAAAAGTTGCCCCCTTTAGATTGGAAAACGAGGCACAAGATAGCCATTGGAACTGCTCGCGGCCTCCACTACTTGCATAAGGGCTGCAAAAGGAGGATAATCCACCGGGACATTAAGGCATCAAACATTTTGTTAACAAAGGATTTTGAGCCACAGGTCCTTTTTTAATCTGTATTATAGTCACTTTTTCCATTTTAGTTGAATCAATATTTCAAACAAAGTTGTTTTATGGGTTTATTTTTACCGAAAGTATTGATGATGTTTTATGACCGTGGCAGATATCTGATTTTGGACTAGCAAAATGGCTTCCATCTCAGTGGACTCATCATTCCATTGCCCCAATAGAAGGGACATTTGGGTACTCATCTTTCCATGGACCCTTCAATGATAAACATGATGGATAGTATATTTTAAATAAAATACATGAATGGTTTGAAAATGGATATTTTTTGAACCTTTTGCAGACATTTGGCCCCAGAGTACTACTTGCATGGAGTTGTGGATGAGAAGACAGATGTGTTTGCCTTTGGTGTGTTCTTGCTGGAAGTAATCTCTGGCAGAAAACCAGTGGATGGGTCACACCAAAGCTTACACAGCTGGGTAAGTAATCCCTCTTTTTTCCTTTGTGACTTTGTTCTGTGGTTATGAACTTGGCGTGTTACAAGAGAAATGCCTTTTGGTTTGTTTGGTCTGATGGTGGTTAAGTCACTATTAATTAACGCTATTATCGGTAAACATGCATTTTGAACAAATAGGCCAAACCAATTTTGAACAAGGGTGGGATTGAAGAGTTGGTAGATCCAAGGCTTGAAGGGGCTTATGATGTTACACAGTTAAAAAGATTTTCCTTTGCTGCATCTCTCTGCATTCGAGCTTCTTCGACTTGGCGACCCACCATGACTGAGGTACCTTACACTTCTTTCTTCACTTCTTTCTTTCCCTTCTTTTACCACAACAATACACACATTAACAAATCATTAATAAAACAACTTACTGCTGTTGATATTTATTCATATTACATCTTAAATAATTCAATTTTATTACAAATTATAAAAAACACAAATAGACTTTATTTAATGAAAGCTAAGAGAAAGCACTTTTTGTTTTTTTAATATTTTTTAAATAATAATAAAGGGTATATTTTAAAGATCCCTTTCTTATTTAATTTTTTTGTTTTTCATTTCTTTATATAGTATCTCTGGAGGCATATGTTGTAACATATTTTATATTGTTTATTTTGAAAAGGACAAGAATCTTTTAAAAAAATCGTTTTAATAGTTGTAAAATATTTCCTGAGCGTACTTTTTTAAGACTTATTTCCTCAAAATAGTAAAAAATGCTTAGTGGACTTATACATTATTTCGTTATTAAAACAGATAAAAAAGATTAAGAATTAAACAAATGTTAATATTTTTTTGAAAAACAATCTCATTAAATAATAACTCTTTTTGAATCTCTTTTGAATCTTGTGCAAGATAATCATGAACACCAGTAAAGAAGTATTTAATATACCATACTAAATGATTTCAATTGCTTAAAGTTATTAAATATGTTGTTTTATATTATTTATAATAAAATAAACATTTTCAAAATGCTTTTTATATTTAGTTTTCTCAACAACATCTTAAAGACGACGATCCATAACATTTGCAAATAAATTGGTATCTTGGTTGTTCTTTTCATCAATGACTGGTATAACCACCACGATGTTTTGCACAAGCGAAACACATTTGATGTGTAGCAAAATTATATTGATAAGTGACACTTGTCATTTTCTTTTTTATTATTTGCCAAGTCAAATTTTTATTTTGACGTGATATTTTCTGTAGTACTAACAACGCTTCCAAGTAATTGAAAAAAAGTATTATTATTGTTTAATAATTTTACAGCGACTGTTATTCCTTTCAAGTAATATTATTATATATTGTGTAGGGTTTATTAATTATTATTATTATTATTATTATTTGATAAGCAACTATTTATTTATTGTTTAATTTTCTCAACGGCTGAATTTCTTGGTTGGGTTGAGTTAACCTTGGCAAGGATTGTGAAATTGTCACGTTATCTATTATTAGCACGTGTAGCGTGTTCACCAGTCTCATTATTGCGTTTTAGATAAGCCAGTTTCCAAGTTAGCAATAAACTATGCATATAAAGAACAGTTTTCTGGCTTGAAAGTTCAAACAATCAATTAACAAAAATATAATAATACCCTTTTTCATTTATTTAATTACGATGGCTTTCATCGTCATTCTCGGATAGATTCATCATAATTTTCTTCCATGCAAATTCATCAATCACTTGATGTTCTCTTCTACCTAATTTTATCCCTTTATGGTAACACCGCGACAACACACATAATATATGCCGATTCATATAATGAAAATGTGTAACAGAAATCGATATATATGTGTAGCTGAAATTAAAAGAGAAAATAAATGCGTAGTTCTATTAGGTTCCATGTCAAATTCATTGCAATTGTGGGCCACTTGTTCTTATTGTGAATCACGCACACAGCAATGATAGTTGGCCGTATGCATTACTGTCAGAATTGAGAAAAGTTTTTGCATAGCTTATGTGAACAATGAGTCTGCCCATTGAAAGTAGAGCACACTGACATCTATTATGTATGATAAATTGATGAGCTTTTAGAAGTTAATGTAAAAGTTGTTGCACATGATTGATGGTGTAGAAATATTGAAAAGAGTTATTTATGAATTGACAGGTATTAGAGATAATGGAAGAGGGAGAAACAGATATGGAAAAGTGGAAAATGCCAGAAGAAGAAGAGGAGGAGGAAGAAGAAGAATTCTGGGGATTTGAGGATCTGGAATATGAATACGATAGCTCATTTTCTATGTCATTACTTGATTCCATTGGAAGCACTGGTTAGGAATTAGACGGTTGTTTGAAGTGTTTGTATATATAGAAATTTGATGGGTATTTGATAGTAATTGAATGTCGGCAACTGGAGAGGAAAATGACAGAGAAGGTTGTTCTGATGCAGTAATCAATTTCAATAATATGGTAGTTTTGTG