Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_07183 LG1 103083314 103084758 PREDICTED: PTI1-like tyrosine-protein kinase At3g15890
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   protein phosphorylation, response to inorganic substance, protein phosphorylation, cellular response to organic substance, protein phosphorylation, protein phosphorylation, protein phosphorylation, protein phosphorylation, signal transduction, plant organ morphogenesis, protein phosphorylation, tissue development, cellular response to organic substance, protein phosphorylation, root morphogenesis, developmental growth, protein phosphorylation, root morphogenesis, plant organ morphogenesis
Cellular Component   is active in   plasma membrane
Cellular Component   located in   plasma membrane, plasma membrane, plasmodesma, plasma membrane, nucleus
Molecular Function   enables   protein kinase activity, protein kinase activity, protein kinase activity
SNP Position Effect Amino acid change
G/T 103083981 splice_region_variant&intron_variant
C/G 103084162 missense_variant p.Ser180Arg
G/A 103084168 stop_retained_variant p.Ter182Ter
T/C 103084169 synonymous_variant p.Leu183Leu
G/A 103084173 missense_variant p.Arg184Gln
A/G 103084404 stop_retained_variant p.Ter261Ter

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_07183.1
MGSSFSCCGSEKVEEVPTSFGVVNNSWRIFTYKELHAATNGFSDDNKLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCVGDDQRLIVYDYMPNLSLISHLHGQFAVEVQLNWQRRMNIAIGSAEGLLYLHSEVTPHIIHRDVKASNVLLNSEFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLELVSGRKPIEKLPGGLKRTITEWAEPLISKGKYRELVDPKLRGNFDENEVKQAINVAALCVQNEPEKRPNMKRVVNLLKGQESEEKKVSVTRIDSIKYTEELLALDEPSDEELDDATASYGVFSAIEVQNMKDPYNRGNYKKIG*


CDS Sequence:
>Vu_07183.1
ATGGGATCCTCATTCAGTTGCTGTGGCTCAGAGAAGGTCGAAGAAGTGCCAACATCATTTGGCGTGGTTAACAATTCATGGAGAATATTCACGTACAAGGAGCTGCATGCGGCTACCAACGGATTCAGTGATGATAACAAGCTTGGGGAAGGTGGTTTTGGAAGCGTGTACTGGGGAAGAACCAGTGACGGTCTTCAGATAGCGGTAAAGAAACTGAAAGCAATGAACTCGAAGGCAGAGATGGAATTTGCTGTAGAAGTTGAAGTTCTTGGAAGGGTTAGGCACAAAAACTTGCTGGGTCTCAGGGGCTATTGTGTTGGGGATGATCAACGCCTCATCGTTTACGATTACATGCCAAATCTCAGCCTCATATCTCATCTCCATGGCCAGTTTGCTGTTGAAGTGCAACTGAACTGGCAAAGGAGAATGAACATTGCAATAGGCTCTGCAGAAGGGCTTCTGTACTTGCACAGTGAGGTGACACCACACATCATACACAGGGATGTGAAAGCAAGTAACGTGCTTCTGAATTCAGAGTTTGAGCCTCTAGTTGCGGATTTTGGGTTTGCAAAACTAATCCCAGAAGGAGTTAGCCATATGACTACCCGTGTGAAGGGTACATTGGGATACTTGGCACCTGAATATGCGATGTGGGGGAAGGTTTCGGAAAGTTGTGATGTGTATAGCTTTGGAATTCTGCTGTTGGAACTTGTGAGTGGAAGAAAGCCCATAGAGAAGCTCCCTGGTGGGCTTAAGAGAACAATAACTGAGTGGGCCGAGCCTCTAATAAGCAAAGGAAAGTACAGGGAGCTGGTTGATCCAAAACTGAGGGGGAACTTTGATGAAAACGAAGTGAAACAAGCAATCAATGTGGCTGCTCTTTGCGTGCAGAATGAGCCTGAAAAACGACCCAACATGAAGCGTGTTGTTAACCTTCTTAAAGGGCAAGAATCTGAAGAGAAGAAAGTGAGTGTGACGAGGATCGACAGTATCAAGTACACTGAAGAATTATTGGCACTTGATGAGCCCAGTGATGAAGAACTTGATGATGCAACTGCTAGTTATGGTGTTTTCAGTGCCATTGAAGTCCAAAACATGAAGGATCCATATAACCGTGGGAACTACAAGAAAATCGGTTAA


Promoter Sequence:
>Vu_07183::LG1:103081314-103083314(+)
TATATTTTTTGAAACATTGGGTTTAGTGGAAAACTTATTTAAAAAAACTCATTATTTGAAGGTATCTCATGTCCTTGAAAGTTTCCTCTGAAAATCTTGTTTCACAATGCATGTCGTATGTATGGAAATTTTGTTCAGAAAAACCTGTTCTAAACATATTATTCTAGAGGACTCATTCAAAAAATTGTTTCATATGTTTAAGAAAATTTGTTCCAAAAAACGAAGTTATGGAAAGTTTGTTCTGGAAGATTTCTTAAACAGGTGATCTGAAAAGGATGAAATGGTCATTTTAGAATATTTGGGAACAGTTAGAAATTTTTGGGATGCAGGAAGCGAAAGCCTTTATTTTTTTCTTCTGTATTTAGAATGATCCAGGTAAGACAAAATGGGTTTTGATATTTGATCATAAATAAAAAAAAATACGCATTAGAAATACGAACTTGGTAAAATGAGTTAAGAAAAAGAATTGAGATTAATAGTTGAACATTTGGAATATGGAATTGGATGACTTCAGTGTTTGTAAATTTTTGAAAAAAATTAGATAAGCAAATAGGAAAAAGATTAATTAATACAATTAAATGCAAAATGATAAAATGCAAGCATATGAATTTGATTGTCATTTAGTAATTCAGATGCATCAGAGAAGTTGACTAATATTCAAGATCGCTCACAACTTACAATTCCTCCAATTGGCATCTTAATACGACTCTGCTTTTTCTCCACGACTTTAAGAACAAACTTCAAACACAATATCCCAACTTATACCTTCATATGACAACCACGTTTTTTTTTTCCTTTTCTTTTAACAAAACGAAGTGAAAATAAGTAAACCAAAAGTAAGACATGCAAAATTGGTGTTCGCATTTAGTAACAACTTGTCCTAGATTAAAATAAAATTAACATTATTGGGGTACTACAAATTTAACAATTCCAAAAACTTGAATTCCATAATATTTAAATTACTTTATTTTTAAAATATTTTTTTTAAAACTAAGTCAATGTTCTAATTTTAAGTCCGTTCACTTGTTAAGTTAATCATTACGTATTTGAAATATTGTTCATTTTGAAACTTTAAATTTCATCCAAAATATAGTAGTCTCGATTTCTAAGTAATTAGAATTATTAGAAATACAGAAAAAAATTTATATTTTAATTTTTCTAAATATAAAATTTATTTTAAAGTTTTATTTTAAAATATAAAAACTTAAAATTAAAATTTAAAAAATCTATATATTAATGTCTATTTCATTTTTATATAATATTCTATTTTTTTTATTTCTATCCAATATGAACTTAGACTCACATTTATACTCTCAAAAGCAATTATCTTTTCATAAGAGAAAATGTATGAAAATAATCCACATGTTAATAACAAGTGTAATCTTAAAAGAACTCTGAATTTTGTAGCTAAACTTATTCTGATTTTCTAGGCTCATTTGCCATCAATATCTTGGTTTCGTAGGGATACATCATAATAAAGTAACCGAAGATCGTTATTGTTATAAAGCAATTCAATTCAATCTAAAGCATTTCAATTCAACATCCATGACGTGTTGACAAAATTGGCTTGTAAAAGCTTGGTGGTAGGGCTGTAGCTTCTATTTATGAGATGCATGAATAACTTTGAATTCAGCACTTGTAGACAATAACACAGTTGAGGCTTGACCAATTGGAGGACAGCGGCTAAAGAAGGAATCTAAAGGGTATATTATCTGATGTTACAATTAGTCAAATACATCTATATTTATTTATCTATGATTTTAAGCGGTGCCCATTTTTGTATAATATGTGTTGCAACCCCTTTGTTATAGTTGTTTAACCAAACTTAAAGTCAAATCTTGGGTTAGCCGGCCAAAGTCGTTCGGCCGGCAATAAATGCAAATGCACGTGCGATTTCAGTGGACCAAAACCACTGTTCTATACTTTAAAACACACAATTTTCATTGGACACAAGTTCCTTAACTTGTTCACCATTTCTTCCCATCACATTGTTCCGATTA


Gene Sequence:
>Vu_07183(+)
ATGGGATCCTCATTCAGTTGCTGTGGCTCAGAGAAGGTCGAAGAAGTGTATGTAACAACATTACCGTTTCTCCATTACTGTTTTCTGATTTTCATTGTTAATAATGTCAATTAATTATTAGCTCTCCTAGTGGTTATTGGTATCACCATCAATCTTACTGATTAGCCTTGTAATTTTTCATAGGCCAACATCATTTGGCGTGGTTAACAATTCATGGAGAATATTCACGTACAAGGAGCTGCATGCGGCTACCAACGGATTCAGTGATGATAACAAGCTTGGGGAAGGTGGTTTTGGAAGCGTGTACTGGGGAAGAACCAGTGACGGTCTTCAGGTAAAAATAGAAATATCAGGCATAGTGCAAAATTGAGTTTGAATTAATGTCTTATGATGATGGCAGATAGCGGTAAAGAAACTGAAAGCAATGAACTCGAAGGCAGAGATGGAATTTGCTGTAGAAGTTGAAGTTCTTGGAAGGGTTAGGCACAAAAACTTGCTGGGTCTCAGGGGCTATTGTGTTGGGGATGATCAACGCCTCATCGTTTACGATTACATGCCAAATCTCAGCCTCATATCTCATCTCCATGGCCAGTTTGCTGTTGAAGTGCAACTGAACTGGCAAAGGAGAATGAACATTGCAATAGGCTCTGCAGAAGGGCTTCTGTAAGTTTCAGGCACACTCATTGAACAATAACATATTTTGGAGATATCTAACCTGAAAAGTTATTATAATGTTTGAAATTGTAAACTTTGATGTTGATGGTAGGTACTTGCACAGTGAGGTGACACCACACATCATACACAGGGATGTGAAAGCAAGTAACGTGCTTCTGAATTCAGAGTTTGAGCCTCTAGTTGCGGATTTTGGGTTTGCAAAACTAATCCCAGAAGGAGTTAGCCATATGACTACCCGTGTGAAGGGTACATTGGGATACTTGGCACCTGAATATGCGATGTGGGGGAAGGTTTCGGAAAGTTGTGATGTGTATAGCTTTGGAATTCTGCTGTTGGAACTTGTGAGTGGAAGAAAGCCCATAGAGAAGCTCCCTGGTGGGCTTAAGAGAACAATAACTGAGTGGGCCGAGCCTCTAATAAGCAAAGGAAAGTACAGGGAGCTGGTTGATCCAAAACTGAGGGGGAACTTTGATGAAAACGAAGTGAAACAAGCAATCAATGTGGCTGCTCTTTGCGTGCAGAATGAGCCTGAAAAACGACCCAACATGAAGCGTGTTGTTAACCTTCTTAAAGGGCAAGAATCTGAAGAGAAGAAAGTGAGTGTGACGAGGATCGACAGTATCAAGTACACTGAAGAATTATTGGCACTTGATGAGCCCAGTGATGAAGAACTTGATGATGCAACTGCTAGTTATGGTGTTTTCAGTGCCATTGAAGTCCAAAACATGAAGGATCCATATAACCGTGGGAACTACAAGAAAATCGGTTAA