Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_07147 LG1 102608325 102613363 PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g23950
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   cellular response to peptide, homeostasis of number of meristem cells, anther development, phosphorylation, cellular response to peptide, protein phosphorylation, homeostasis of number of meristem cells, anther development, phosphorylation, cellular response to peptide, cellular response to peptide, cellular response to peptide, protein phosphorylation, protein phosphorylation, protein phosphorylation, anther development, protein phosphorylation, anther development, protein phosphorylation, cellular response to peptide
Cellular Component   is active in   plasma membrane
Cellular Component   located in   extracellular region, extracellular region
Molecular Function   enables   protein binding, protein serine/threonine kinase activity, kinase activity, protein binding, coreceptor activity, protein serine/threonine kinase activity, protein kinase activity, protein binding, protein kinase activity, protein binding, protein kinase activity, protein binding, protein serine/threonine kinase activity
SNP Position Effect Amino acid change
C/G 102608403 5_prime_UTR_premature_start_codon_gain_variant
C/A 102608512 splice_region_variant&intron_variant
G/A 102608831 missense_variant p.Ala71Thr
C/T 102608901 splice_region_variant&intron_variant
A/T 102609014 intron_variant
C/T 102609564 splice_region_variant&synonymous_variant p.Phe164Phe
T/G 102609675 intron_variant
C/T 102609956 missense_variant p.Ser216Leu
A/G 102610210 intron_variant
G/T 102610289 stop_gained p.Gly268*
T/A 102611042 intron_variant
T/C 102611051 intron_variant
C/A 102611208 intron_variant
A/G 102611216 intron_variant
C/T 102611561 synonymous_variant p.His440His
C/A 102611822 intron_variant
C/G 102611844 intron_variant
C/A 102611864 intron_variant
T/A 102611971 intron_variant
A/T 102611972 intron_variant
G/T 102612139 intron_variant
T/G 102612487 missense_variant p.Leu522Arg
G/A 102612489 missense_variant p.Gly523Arg
T/A 102612555 missense_variant p.Leu545Met
G/A 102612568 missense_variant p.Arg549His
G/A 102612609 missense_variant p.Gly563Arg
G/A 102612610 missense_variant p.Gly563Glu
G/C 102612840 3_prime_UTR_variant
G/A 102612841 3_prime_UTR_variant
G/T 102613058 3_prime_UTR_variant
T/A 102613310 3_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_07147.1
MALLFLFLLLFLSLSSASQPRNPEVEALMNIKAALNDPHGVLNNWDEYSVDACSWAMITCSSDDLVIGLGAPSQSLSGTFSPAIGNLTNLRQVLLQNNNISGNIPPELGALPKLQTLDLSNNRFSGVIPASLSQLNSLQYLRLNNNNLSGSFPESLAKTPQLAFLDLSYNNLSGPLPKFPARSFNIVGNPLVCGSSTTEGCSGSATLIPISFSQVSSEGKHKSKKLAIALGTSLSCASVILLLVGLFWYRKKRQLGAILYISDYKEEGVLSLGNLKNFTFRELQHATDNFSSKNILGAGGFGNVYRGKFGDGTMVAVKRLKDVNGSAGESQFQTELEMISLAVHRNLLRLIGYCATPNEKLLVYPYMSNGSVASRLRGKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDYYEAVVGDFGLAKLLDHADSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMTALEFGKTVNQKGAMLEWVRKILHEKKVAVLVDKELGNNYDIIEVGEMLQVALLCTQYLTAHRPKMSDVVRMLEGDGLAEKWASSHNYGNHDMNPSHSNNSSSLHTSASKHDDVHDRSSMFGMTMDDDDEQSLESYAMELSGPR*


CDS Sequence:
>Vu_07147.1
ATGGCTCTGCTCTTCCTCTTTCTCCTCCTCTTCCTCTCTCTTTCCTCTGCTTCTCAGCCTCGCAATCCCGAAGTGGAGGCTTTGATGAACATAAAAGCAGCTCTCAATGATCCTCACGGCGTCTTGAATAACTGGGATGAATACTCCGTCGACGCTTGCAGTTGGGCCATGATCACCTGCTCTTCTGATGACCTTGTCATAGGCCTAGGTGCGCCTAGCCAATCTCTCTCTGGCACTTTCTCTCCGGCAATTGGAAATCTAACAAATCTTCGACAAGTATTGCTGCAGAACAACAATATCTCAGGCAATATACCACCGGAACTTGGAGCGCTTCCCAAGCTTCAGACATTAGACCTTTCCAATAACAGATTCTCAGGGGTGATTCCTGCATCTCTTAGTCAATTGAATAGTCTCCAGTACCTGAGGCTCAACAACAATAATTTGTCCGGATCCTTTCCCGAGTCACTGGCAAAAACCCCACAGCTTGCTTTCTTGGACCTGTCTTATAACAATCTCAGTGGACCATTACCTAAGTTCCCAGCCAGGTCATTCAATATTGTGGGCAACCCATTAGTTTGTGGGAGCAGCACTACTGAAGGTTGCTCTGGGTCAGCGACCCTCATACCCATTTCCTTCTCGCAAGTGTCATCAGAGGGAAAGCACAAATCCAAAAAACTAGCAATAGCACTTGGGACCAGTCTTAGTTGTGCTTCTGTCATCCTCCTGCTTGTTGGGCTATTTTGGTATAGAAAGAAACGACAGCTCGGAGCCATCCTATATATCAGTGATTACAAGGAAGAAGGAGTTCTTAGCTTGGGAAATCTAAAGAATTTCACTTTCAGAGAGCTTCAACATGCAACGGATAATTTCAGCTCCAAGAATATACTTGGTGCTGGAGGCTTTGGCAATGTTTATCGGGGGAAGTTTGGAGATGGCACGATGGTAGCGGTGAAAAGGCTGAAAGATGTAAATGGCAGTGCTGGCGAATCGCAGTTCCAAACAGAGTTGGAGATGATCAGCTTGGCAGTTCATCGCAATTTACTTCGCTTAATTGGCTATTGTGCTACTCCTAATGAAAAACTTTTGGTTTATCCTTATATGTCTAACGGCAGTGTGGCCTCCAGGCTTAGAGGCAAACCAGCTTTAGATTGGAACACGAGAAAGAGGATAGCAATTGGAGCTGCCAGAGGCCTTCTGTATTTACACGAGCAATGTGATCCAAAGATAATACACAGAGACGTGAAGGCCGCCAATGTGCTTCTGGATGACTATTATGAGGCTGTTGTTGGAGATTTTGGCCTTGCAAAGCTCCTTGACCACGCTGATTCCCATGTCACCACTGCTGTCCGTGGCACTGTTGGACACATTGCACCTGAGTACCTCTCGACCGGCCAATCATCTGAGAAAACAGATGTGTTTGGATTTGGCATTCTCTTGTTAGAGCTCATAACCGGAATGACAGCACTCGAGTTTGGGAAAACGGTGAATCAAAAAGGTGCTATGCTAGAGTGGGTTAGGAAAATACTACATGAAAAGAAGGTTGCAGTGTTGGTGGACAAAGAGCTAGGAAACAATTATGATATAATAGAGGTGGGGGAGATGCTGCAAGTTGCTTTACTGTGTACTCAATATTTGACAGCCCACCGCCCTAAAATGTCTGATGTGGTTCGAATGCTAGAAGGTGACGGGCTTGCTGAGAAGTGGGCATCATCACATAATTACGGTAATCACGACATGAACCCGAGCCACAGCAACAATAGTTCATCCCTCCATACCTCTGCTTCGAAACATGATGATGTTCATGACCGTTCAAGCATGTTTGGCATGACAATGGATGATGATGATGAACAGTCTTTGGAATCCTATGCCATGGAACTCTCTGGTCCTAGATAA


Promoter Sequence:
>Vu_07147::LG1:102606325-102608325(+)
AACATCTAGTTTGGAATAAAAAGTATGTAACACTTAAATTTTGAAAATATATGTGATTTAGTAGAATTTCTTTTTTATCAAAACATATATCGTATAACATATATGATTTTTATCCAAATTCATAGGTAGAATTATCATTTAAAGTATTAACATGTTTGAAAGTATGACAGAGGATCAAATTGCCATTATTAAAGAAGAACCCCAGGCTTATTAAAAAGTAGACTTTAAATTTAACTTAATCTCACAAAACCAGTCTTGTAAATGGAGGTTTACACCCACTTATATATTATAAATTGACCTTATCTCTAGTTGATGTGAAACTTTCAACACACCTCCTCATGCTGAAATATATACATATCGAGCGTAAGACTAGACATTAACGGGTGGTCCAATAACAACCCAATAGCGAGTGGAACAACATACCCAACAAACAACAAAATATCACTAGATAGATTCTAACCACGACTCTAATACCATGTTAATAAGTATATTTTAAGTCTAACTCAACCCCATAAAAATGGCTTGTAAGGATAGCTTTACACCAATTTATATATTATAAATTAATCTTATCTCTGGTCTAAGTAAAACTTCCAACACTATCAATATTGCTTATGGGTTAATCCTCGTTATATTATGCTTGTATACTATTAATAAAACTTATACGTTTTTGGGATTTATTTGAAAGTAAAACAAACCAAGAAACAGTAACACTTTTTCATTGCGATGAATGTAATATATAGTTGTTGGATTGTTCAAATGTTTCATTTGAATGACAAGTTTGTAACCACATGTGAAAAATAACAGTGAAAATATGTATGAACTATAACTCTAACAAAGTTCTAATATTATGTTAATAATTCCTCCTTAAGTAAAAAAAATAACAATAATAAAAATATGTTATTTTTTCTTAACGATTCGTAAGCAGTCAAAGTATATATTTATTGTATTAAAACATAAAAAAGAATAAAATTTAAACTAGTAAGAATTTGATAGAATACCTTGAAAATGTCTAATTTTGATTGATATTAGTTTAAGTTTGTTGAGATTACATCATACCACCCTTAATTAGGAGTAAATTGGGAGTTGTGATTCCTAATTTGAGGTATGTTTTGATATAATATGGATGTTTGATAAGTCATGAATTAAATACTCAACAAGTTATTCGGTCTTACATGGAATAGTGGATCAGACTATGAATAAAGTTAATCATAAAAATAATTATATCAACTTTAAATGAAATTATTATTATTTAAATCATAATTAAATCAATATTAATCATAAATTCATCAAAAGAACGATTAAATACAAATTTAATATTCAATTAATCAGTTACTTTTTTTTATTATGTATTTATGGTCAGAGCATTCATATAAACACTGACGTGTTTTATATACATGTAACTTCCACTCGATCTAAAAGAAAATGTTGAAAACAAAATTTTAACCTTAAATATTACAAACCCTTTAAAAGAGCATACTTAACCTCCATCCCATAAATCAAAATAAAATCAATTCCAAAAGACTGAGTTAAACATTCAAAATACTTAACTTAATTTTAACATGATTAAATAGGTTGGAACTAAATGTAAATTTTCATTAAATATAGTCTGGGAAAGCAATCATAAAAATAATCCTTATTTTAATTTCTACCCAGTAAACAAATTAATTTTTGAAAGTAAGTTGGTTATAAAAATATTAAAGAGAGTGAGTATTATTGACAAGACAAGAGCAGTGACATATATAAAATAGTAAAATGAAAGTGGGAAAAGAAAAAGCAGTAGAAGGAAGCAACGCACAGTGTAGGCTGGGACTGCACTGCAATGCAACATCTGATGGACGTTTTGATTCTCGCGGCCTCCTTCACGTTCTTCTGCTGAGTAAAAAGCAATCACACAGAAGAGAAGAGAGAGAGAGAAAGCAAAAGAGGAAAGAGATATACCAAAAGAAGGAAGAGGAGAGAGAAATCAAAACATAAAAGAAAAGATTGGTTTGGTGTAGTTG


Gene Sequence:
>Vu_07147(+)
GCTTTGGTCTAGTCTCATTCCTAGCACCAACCTTTCTTTCATCTCAACTCAACCTCCCTTTTCAAATATCACGCTCTTCTCTCCCTCGTCCTCCACTCCCATTTCCACGCTCATGGCTCTGCTCTTCCTCTTTCTCCTCCTCTTCCTCTCTCTTTCCTCTGCTTCTCAGCCTCGCAATCCCGAAGGTCTGTAACCATAACTCGCCCTGTTTCTACCATTTTTAAGCTTCACTTAATTCATATTATAATTGTTCGTACTGATATAAGTGAATTGCAGTGGAGGCTTTGATGAACATAAAAGCAGCTCTCAATGATCCTCACGGCGTCTTGAATAACTGGGATGAATACTCCGTCGACGCTTGCAGTTGGGCCATGATCACCTGCTCTTCTGATGACCTTGTCATAGGCCTGTTAGTGCTAAACTAAACGCCTTCTTTTCTGAACTTTTTTTTTTCGCTTTTCCTGCATTTCTTTTCTCACTTTGATTTTTTTTTTCTCCGCAGAGGTGCGCCTAGCCAATCTCTCTCTGGCACTTTCTCTCCGGCAATTGGAAATCTAACAAATCTTCGACAAGTGTCAGTACCTTCTCCTCTTTGCAATCTCTATAACTTTTTTTTTCCTGTTTTTCATGTCTCTAATAGTGTAACGGTCATCTTATGCTACACGGATAGCTGGCATGATTATCTTTTTATGCGGTTTTTTAGTATTTTTTGTTGCTTTATGTGGTTTGGAGTGCTCTAAAAGCGGTTTGGTGGTTGAATGTAGATTGCTGCAGAACAACAATATCTCAGGCAATATACCACCGGAACTTGGAGCGCTTCCCAAGCTTCAGACATTAGACCTTTCCAATAACAGATTCTCAGGGGTGATTCCTGCATCTCTTAGTCAATTGAATAGTCTCCAGTACCTGTGAGTAATTATTGTTTCCTTGATTTTAGTCCTCTTTTGGTAAAGAAAGTGCGGGAAATTATTTAAGCAAAGATTGGCTAATGCCCACTATCTGTTCTTTAGTTGTTGACTTGCTTTCTTTTTTCTGTTGAGGTGTAAAGTTTATTATTTTATTTTGTGTGTTTTTGGATTCTGTTGCCTCTTTTTCGGATTCAAATCTGGTTGTGTAAATTATGTAATGTAATTTATTAATTTACTGTTTCTTTGTCCATAATGGGAGCAGGAGGCTCAACAACAATAATTTGTCCGGATCCTTTCCCGAGTCACTGGCAAAAACCCCACAGCTTGCTTTCTTGTGAGTGTAGTTCCCTCTTCTCACACGTCAGTGTCTTGAAAATCGAAACAACCTGCCACTTGGTTCATTTCTTACTGTTTGTCAATTTCTTTGCTGAAACTGATATGCTAAATCTATGCACTCAGGGACCTGTCTTATAACAATCTCAGTGGACCATTACCTAAGTTCCCAGCCAGGTCATTCAAGTATGCTTCTCTCTTTATTGCTCATCTGTTTGTTTTGTGAACACGGTATTATATTATTTCACAGTGTTAACTGTGCTTCTGTCCTGATTCACTGTTTCTTCTGTTTGTTTAGTATTGTGGGCAACCCATTAGTTTGTGGGAGCAGCACTACTGAAGGTTGCTCTGGGTCAGCGACCCTCATACCCATTTCCTTCTCGCAAGTGTCATCAGAGGGTACGTCATTTTACCTCCCACCTTCTCGGTTTCTTCTATTTTCTTTACACAACGTTTTTAATATGTATTTCATTTTTTGTTTACAGGAAAGCACAAATCCAAAAAACTAGCAATAGCACTTGGGACCAGTCTTAGTTGTGCTTCTGTCATCCTCCTGCTTGTTGGGCTATTTTGGTATAGAAAGAAACGACAGCTCGGAGCCATCCTATATATCAGTGGTGGGTAGTTTTGCACCTGGGGTTCTTAAATTATATGGTACTGGATTGGTATTATCAAGGTATTAATATTTATGGCTTTGGTATTGTTGCAGATTACAAGGAAGAAGGAGTTCTTAGCTTGGGAAATCTAAAGAATTTCACTTTCAGAGAGCTTCAACATGCAACGGATAATTTCAGCTCCAAGAATATACTTGGTGCTGGAGGCTTTGGCAATGTTTATCGGGGGAAGTTTGGAGATGGCACGATGGTAGCGGTGAAAAGGCTGAAAGATGTAAATGGCAGTGCTGGCGAATCGCAGTTCCAAACAGAGTTGGAGATGATCAGCTTGGCAGTTCATCGCAATTTACTTCGCTTAATTGGCTATTGTGCTACTCCTAATGAAAAACTTTTGGTTTATCCTTATATGTCTAACGGCAGTGTGGCCTCCAGGCTTAGAGGTTGGATATTCTCTCCATGCCAGCGCACTTTCTGTGACTATATAATATTATATATTTTATTAGGTGCAATATTATCTACTTGTCATCTTGCTTGGACCTTGTTTTAATCTGTTATCTGTCTTTCATGTTTTGGCTTCGATATTCTTGTGATTGAAGGGCCTTAACGTTCATTTCAAATTGCAATATAATATGGCTTGGGACTTTGGGCACTATTTCTTTCCCTTTCTTTTGTTTTAGTTAAGTAATTTGCAATGTTAAGCCTACTTGTTAGTGTTAAAACATGTAATGATGCATTCATGCTTACAATATGTCATTGGTGTTCGCTATCTTGGTGCATTCTATCAAATAAAAATTCCCAAATTGTTGTAATTTTGAATGATATGCTAGAAAGGGTCTGAATAGTCGATAATCAGGGATACGCCTACAAAAGGTAGTTGGGTAATTGATATCCTAATAAAACTCTGATTGGATGATTTCTTGTCAGGTTTTCAATAATGTTTATCTAGGCGTCGGATCCCTACTTTTGTTAGAATGATAGATTCAATATTACTTGTTTCTTTGTGGCTGTTAGCAAGAGTTGCTATAAAGCCAATGGTATTTTCCTTTCAATAGCACAATAAATGAAAAGTGTGGGAGGTTTTTCTTAACTAACTGTTTACCTTCAAATTTTCCATATGACCAGGGACGATTTAGCTATTGAATCTTAGTACTTTCACACTCTTTGTGATTTAATATAATGTATGTTATATGATAGGCAAACCAGCTTTAGATTGGAACACGAGAAAGAGGATAGCAATTGGAGCTGCCAGAGGCCTTCTGTATTTACACGAGCAATGTGATCCAAAGATAATACACAGAGACGTGAAGGCCGCCAATGTGCTTCTGGATGACTATTATGAGGCTGTTGTTGGAGATTTTGGCCTTGCAAAGCTCCTTGACCACGCTGATTCCCATGTCACCACTGCTGTCCGTGGCACTGTTGGACACATTGCACCTGAGTACCTCTCGACCGGCCAATCATCTGAGAAAACAGATGTGTTTGGATTTGGCATTCTCTTGTTAGAGCTCATAACCGGAATGACAGCACTCGAGTTTGGGAAAACGGTGAATCAAAAAGGTGCTATGCTAGAGTGGGTAAGTCTATTCTCTGCAACCTAAACAAAACAATTACGGCATTCTAAAATATTAGACATGGTAATTGGCAGTTAGTCTAATATCTTTTAGCTTATGCAATATTTAACTCTCCATTAGGAGTTCCTCATGCATGGTTTTTTTTTAACATGGTCTTTTTAATAATTTGCTCTGATCTGCACTGGGCTACAGCTTCTACGAAAATGTCTTCATTTTATTTTATGCATTTGTCCTAATGTATTGAATGCGCTTAACCATAGTCTACACTTCTGTCGTCTGGTATGTGCATTGTATTAGACCAAACTGTTTTAACTAATTGCTCTTAATAACTCAAAAACATGGTTAGTTATGTGTCTGTGACTGGTCCAATATATTAGTTATTGCTTTTGAGCAGTTGATGGCTTATGTGCTGTAATTACTAAATTACAAGAGGAACTTACTATCTGCAGCTGATGATGGATGATACTCTTTTTTTCTTGAATAGTCAGTATGATATTAATGGAATATATAGTGAATATAGTTGGTTGCTACCTGTAAACCAAACTTCCTGGTCCCCCTTCTCCTCTCAGAAAAAAAGCATATTGAGTGTTGAGTAGTTGTTGAAATAGGTATCTGAAGGTTGGCTGAAAGAGTTATGTACACTTCAGAGACCAGAGATGAATATTTGTCCGTATGTTGTGACAGGTTAGGAAAATACTACATGAAAAGAAGGTTGCAGTGTTGGTGGACAAAGAGCTAGGAAACAATTATGATATAATAGAGGTGGGGGAGATGCTGCAAGTTGCTTTACTGTGTACTCAATATTTGACAGCCCACCGCCCTAAAATGTCTGATGTGGTTCGAATGCTAGAAGGTGACGGGCTTGCTGAGAAGTGGGCATCATCACATAATTACGGTAATCACGACATGAACCCGAGCCACAGCAACAATAGTTCATCCCTCCATACCTCTGCTTCGAAACATGATGATGTTCATGACCGTTCAAGCATGTTTGGCATGACAATGGATGATGATGATGAACAGTCTTTGGAATCCTATGCCATGGAACTCTCTGGTCCTAGATAAACAATAAATGGGGAAAAGAAAACAGGAAGAAGATAGAAAAGGAGAAAAAAGGAGTTATATTGGTCATGAATCTTAAATCAGTTAGTTTTGGTTATTCTAGGATAATATAATCAAATCAAATGTATATATATATATTCCAAAAAGTTGTCATATTGGGTCTGTGTTGTAAATAAAGAGGTTAGTACCAGTGCAGTTGTACTCTGTTCCTGTGTATTATTTGGGTGCAAAATATATATAATGGAGGACAATGCGGTTGGTGGGTGCGCAATACGCACATTAGACTTTTTATAGGGTTGGACAGGGAACATCATCAGATTCTTTGCCCTGGAGTGTGAAGCAGCAGAGACAAGAGGGTGTGTTCCGCAGAATGATATTTGACTGAAGACGAAGATGGGCATGCATATCTCGTAGTGTCCTCTCATATGTCTTGTTCATGTATGTTCAAACTTGGAAGTATCAGTGTGTGATGGTCACAGTCTGAGCTTTTGAGCTGTTAGAGGTCATTGTCAATCTGATGCTTTGCAGGGTCACGCTTGCCCTTTTTCTCC