Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_06941 LG1 100414300 100417076 hypothetical protein
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/C,* 100414329 5_prime_UTR_variant
A/T 100414353 5_prime_UTR_variant
T/A 100414562 upstream_gene_variant
C/G 100414574 upstream_gene_variant
T/G 100414635 upstream_gene_variant
T/G 100414638 upstream_gene_variant
C/T 100414644 upstream_gene_variant
C/T 100414776 synonymous_variant p.Cys28Cys
G/T 100415012 upstream_gene_variant
C/A 100415054 upstream_gene_variant
G/T 100415056 upstream_gene_variant
A/T 100415075 upstream_gene_variant
A/T 100415834 missense_variant p.Gln226Leu
G/A 100415979 synonymous_variant p.Glu274Glu
C/G 100416007 missense_variant p.Pro284Ala
C/T 100416186 synonymous_variant p.Ala343Ala
G/A 100416531 synonymous_variant p.Pro458Pro

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_06941.1
MDEDSLKRNTDCVYFLASPLTCKKGAECEYRHNEIARLNPRDCWYWVSGQCLNPTCAFRHPPLDGHTGVPAPSEPAQISLPANKTMVPCYFFFNGFCNKGDKCSFLHGSDDSIFTVKPVKNDDGSTDARNLENKTSSGNGTGVASVPTHQSLTVPKHLSDFKRQPKEKLQLSKNVQQQGDSLVISASEYKEAAVSRSDSPFPDDGFVHNVSHLRTERSSEEQVNSQIEPEERWESSPHSPGFDVLVHNELENLGYEEDSEYLPVLDRNEQELNEQYLGYEFKDPVEYDTMCPEADILYPQETYDGYRCFDSDLTHGNGRTVRTYSRDIFLDSIFSRKRIRMSAEVAAYDNNLDLRDHLRRRRENNGPPIAGFLRRQESSSLMIRNQERHQRPGIEQRPSRLTSQLGYSAIDSIGEVETLSIANKHRLFRRSQQHKPRKHYREKPAKRPFLSSKISRKPVFKQRGFVEESTAFSGPKTLAEIREEKKKAEEGLHWKRPSTDFQDPKPLSEILKDKRTMD*


CDS Sequence:
>Vu_06941.1
ATGGACGAAGATTCGCTCAAACGCAACACTGATTGCGTTTATTTTTTGGCCTCTCCCCTCACTTGCAAAAAGGGGGCTGAATGCGAGTATCGGCACAATGAGATTGCGAGGCTTAACCCTAGGGATTGCTGGTACTGGGTATCTGGCCAATGCCTGAATCCAACGTGTGCTTTTAGACACCCTCCTCTGGATGGGCACACTGGAGTGCCAGCGCCATCTGAACCTGCACAGATTTCATTGCCTGCAAACAAGACAATGGTTCCGTGTTATTTTTTCTTCAATGGATTTTGCAACAAAGGTGACAAATGCTCTTTTTTGCATGGGTCTGATGATAGCATTTTTACTGTAAAACCTGTGAAGAATGATGACGGAAGCACCGATGCACGCAATCTAGAAAATAAAACATCATCAGGAAATGGAACTGGTGTAGCGTCAGTGCCAACTCACCAATCTTTAACTGTTCCAAAGCATTTGTCTGATTTTAAGCGTCAGCCCAAGGAAAAGTTACAGTTATCCAAAAATGTTCAGCAGCAAGGCGATTCCCTAGTGATATCTGCTTCTGAATACAAAGAAGCTGCAGTAAGTAGGTCAGACTCTCCGTTTCCAGATGACGGCTTTGTACATAATGTATCTCATTTACGCACTGAGCGGAGTTCGGAAGAGCAAGTAAATAGTCAAATTGAGCCTGAGGAGCGGTGGGAATCATCCCCTCATTCCCCTGGATTTGACGTTCTTGTGCACAATGAATTGGAGAACTTGGGTTACGAGGAAGATTCTGAATATTTACCAGTGCTTGATAGGAATGAGCAAGAGCTGAATGAGCAGTACTTGGGGTACGAATTTAAGGATCCAGTTGAGTATGATACTATGTGCCCGGAAGCTGATATTCTGTATCCACAAGAAACATATGATGGTTACAGATGTTTTGATAGTGACCTTACTCATGGTAATGGCAGAACAGTTCGTACTTATTCCAGAGATATATTCTTAGATTCTATATTCTCCAGGAAAAGGATTCGGATGTCAGCCGAGGTGGCTGCCTATGACAATAATTTAGATCTACGTGACCATCTCAGGAGACGTAGAGAAAATAATGGGCCTCCCATTGCAGGTTTCTTAAGAAGACAAGAATCGTCTTCTTTGATGATTCGAAACCAGGAAAGGCACCAGAGGCCTGGCATTGAGCAGCGGCCAAGTAGATTGACATCACAACTGGGATATAGTGCTATAGATTCGATTGGAGAGGTTGAAACTCTTTCAATCGCTAACAAGCACAGGTTATTCAGGCGTTCCCAGCAACACAAACCAAGGAAGCATTATAGAGAAAAGCCAGCGAAACGACCATTTCTGTCATCTAAAATATCCAGGAAACCGGTTTTTAAACAAAGGGGATTTGTTGAGGAATCTACTGCATTTTCAGGACCTAAGACTCTTGCAGAAATTAGAGAAGAGAAGAAGAAGGCTGAAGAAGGTTTACATTGGAAACGCCCATCAACTGATTTCCAGGATCCCAAACCTCTGAGTGAAATTCTGAAGGACAAAAGGACCATGGATTAG


Promoter Sequence:
>Vu_06941::LG1:100412300-100414300(+)
TTAAGGGACCAAAAACATATTTAACCCAAAATAATATTACCTACACGAAATGACATCCATGAACGTGTCTTATACAAATTAAAAAATAATTTTAATCGATGTTGTTTTATATCAAAAGGCGATTTACTGCAAAATGGGAAGATAATATAATTATGACCGTATAATCATCCACGGGTTCCTATTAGCCTTTAATGAATAAATGAAATTGTTATAAAATTTTCAACAAAAATTTTGAAGGGAGGATCGACATAAATCTCCATACTGCTAAGATATTGTCCGCTTTGGACCAAACTCTCACCGGTTTGGTTTTAGTACTACTCCAAAATGTCTCTTACCAATGAAGGTATCTTATGTATATATAAACCCATATCTATCTCTTGTTTTATCTTATGTGAGACTTTGTTTGTACCCAACAAATTTTGCATTTGGCTTTAATATTTTTCAGAATGTGGAAGCAACATAGCATCTTATATGACTCAAGGGATACATTGGCAATGACTTTCATCAAAGCCAAGTATTTCTCACTGACAATGACTTGTGGACCGCTCTCAGATGTCAAAAATAAACCTTTTAGCCTTTCTAAATCCCAAGTGAAATTATTTTGTTGTTCACTTGATAAGAATGCAAATGCTGCTGAGAAGGTCAATCTAGTAGACGTCACACCAACCATCTCAACCAAGGGAAGTCAATATTTGTTTGTTTTGTACGTTGAATCTATCAACAAAAAATATTAAATGTGTTCAACAATTTGTCTGCATCAGGATGTGTCCAAAAGATGTCACTTACAACCTTAAATTTTTTTGACACATCTAGTCCAATGAATGTAGTTATCACGATCCAACGCCATCATCAATTGTTGCACTTTAGTTCTCGATTCTCTCAATAATCGTTTATATGTATACTTTGTGTTGTAGATTTGTTTGATTGTTATGACATTATGATTGTTATTTTCTTTAAGAGTCAATAAAATATTTGCAAGTGACTTTTGTCATATCAACAAGTAATAATTGTTCACTGGGATTTAACCTCCCAACAATGGAGTGACCAACTAAACTTTATATCAAATCCAGTTGTGATATCAGCACATGACCTTCAATATCCACTCGTCGCCATTAGAAGATGACTTGTCCTTTAACTTGAAAAGACACTCACATTTTCGGGTGTCATATATATTAGGTTGGATATCAAGCTTCTATTTTCTATACTTTCCACTTTTTTTACATCTTAGCAACCTAAAAGTTTTCCTTCTCAATTTACCGGTAGTTTTTTTTCGATCTTATAATAACCACAACAAACCCTAGAAGATGTGCAATCTCTCTCACCAGAATTAACTCATCATGAGATGAAAATATTTTATTCATTGTAAAATTATTTGTCAATTCTCCTCTGTCATTTTTATAAGAAGAAAAATCTGTTGAAGAGTATTTTGATTATCGGTTCAACATATTTTAAAATCCATTAGAATCTTCAGCAGATATTCAAGAATAGGTTTCGACCTGCTTTTGTTGAACGAAGTGAAACTCTGAGAGATAGCACCACCAAAATAGCAACGACCAGCACCTCCCAAACAAAACGACCAGCACCACCAATCGCAAACACAATGGTCCACCATAGAAGGAACAAAGAACGAAACTTTGAGACAGAATGGACTACTAGAGAAAGCACAATGGAAGCACAATGAAAGTAGGACCACACACGAGAAAACAACCAAAGCATTCAAAGGAATTTGGGGTGCAAAGGATATAAAAGGGAAAGAATGTGGTTGGAAGTTCGGTGCACTTAACCAATCTTATTTACTCACATGGCATTTTCGGAACTTGGAGGGTGCAGGAAGAAATGTTTAGAGGTTGAAGGAGAGGCTCCCTATATATATGGTCCGTTTAGGATGATGGGCCGAATTTGAGCCCAAAGGTTGGAAGTCCAACTAAAGCATATGTGGTTTGTTTGTCTTTGTCCACAAACAGTGAAATAGTGAAATAATGAGGATGGTTGTTTCTTCG


Gene Sequence:
>Vu_06941(+)
GGGGATGCTAATGCCATTCACCACTGATTAACATTGAACGGTAATGTGAGAGCAAAATTGGAACGTGGTGATTTCCTTCTTCTTCTTCTCTTCCAAATACCCCTTTTCACTCTCCCAATATGGACGAAGATTCGCTCAAACGCAACACTGATTGCGTTTATTTTTTGGCCTCTCCCCTCACTTGCAAAAAGGTTCTCTCTTTCTCCCTTTCACTTTTTTTCAATGCCACATTTTTTCTTCTCCTCTGCGCAATTCTATTTCCTCGTTTCGTATGCCGTTTCTTGTCTCCTTCGATTGTCGGAAACCTAGTTTTATTTCACCCTTTTCGACTATGTTCTTTTTCACGTTTTCCAGTGCTTCGATTATACAATGCTTGGTTTTCTGGAGTCTACGTGACTTTACTTTTGGTAATTGCTGATGTTTTATTATCTTTAGATTTTATGCATTTTTCTCTTTGTTTCCCAGGGGGCTGAATGCGAGTATCGGCACAATGAGATTGCGAGGCTTAACCCTAGGGATTGCTGGTACTGGGTATCTGGCCAATGCCTGAATCCAACGTGTGCTTTTAGACACCCTGTGAGTTTTTTTAATCATTATTTATTTTATGTCACGAATTGAAGGCTCGCTCGCATTTTTCACTTCTCATTTTCTCTTCAATTTATTGCTTAAGTGAAACACTGATATTTTGGACAGCATTGGCACGTGTGTGGTTGAATACAAGTCTGCTTATCTCTGTTTGCTGTTTTTTCTATTACGGTTTCTGAAACAAACGTATAGGTTATTTCTCAAATATATGCTGAATGAAGGATGTGTTTCTGTTAAACCCTTATAAATACCGGCGATATTACATTTTGCTCTCATGCAATATTGAAAAAAAATTATTTGATATCCATTTGGTTACTGTTATCTCTTTCACGCACCCCCTCCCCATGTATTTGATATCTACTTTGTTATATTTTTTCTTGTTTAAAACTATTCTCTATCACTCAGGCCAGTTTTAACCTCTTATGACTGTCTGATTGATTTTTATCCTTTTCTCAGCCTCTGGATGGGCACACTGGAGTGCCAGCGCCATCTGAACCTGCACAGATTTCATTGCCTGCAAACAAGACAATGGTTCCGTGTTATTTTTTCTTCAATGGATTTTGCAACAAAGGTGACAAATGCTCTTTTTTGCATGGGTCTGATGATAGCATTTTTACTGTAAAACCTGTGAAGAATGATGACGGAAGCACCGATGCACGCAATCTAGAAAATAAAACATCATCAGGAAATGGAACTGGTGTAGCGTCAGTGCCAACTCACCAATCTTTAACTGTTCCAAAGCATTTGTCTGATTTTAAGCGTCAGCCCAAGGAAAAGTTACAGTTATCCAAAAATGTTCAGCAGCAAGGCGATTCCCTAGTGATATCTGCTTCTGAATACAAAGAAGCTGCAGTAAGTAGGTCAGACTCTCCGTTTCCAGATGACGGCTTTGTACATAATGTATCTCATTTACGCACTGAGCGGAGTTCGGAAGAGCAAGTAAATAGTCAAATTGAGCCTGAGGAGCGGTGGGAATCATCCCCTCATTCCCCTGGATTTGACGTTCTTGTGCACAATGAATTGGAGAACTTGGGTTACGAGGAAGATTCTGAATATTTACCAGTGCTTGATAGGAATGAGCAAGAGCTGAATGAGCAGTACTTGGGGTACGAATTTAAGGATCCAGTTGAGTATGATACTATGTGCCCGGAAGCTGATATTCTGTATCCACAAGAAACATATGATGGTTACAGATGTTTTGATAGTGACCTTACTCATGGTAATGGCAGAACAGTTCGTACTTATTCCAGAGATATATTCTTAGATTCTATATTCTCCAGGAAAAGGATTCGGATGTCAGCCGAGGTGGCTGCCTATGACAATAATTTAGATCTACGTGACCATCTCAGGAGACGTAGAGAAAATAATGGGCCTCCCATTGCAGGTTTCTTAAGAAGACAAGAATCGTCTTCTTTGATGATTCGAAACCAGGAAAGGCACCAGAGGCCTGGCATTGAGCAGCGGCCAAGTAGATTGACATCACAACTGGGATATAGTGCTATAGATTCGATTGGAGAGGTTGAAACTCTTTCAATCGCTAACAAGCACAGGTTATTCAGGCGTTCCCAGCAACACAAACCAAGGAAGCATTATAGAGAAAAGCCAGCGAAACGACCATTTCTGTCATCTAAAATATCCAGGAAACCGGTTTTTAAACAAAGGGGATTTGTTGAGGAATCTACTGCATTTTCAGGACCTAAGACTCTTGCAGAAATTAGAGAAGAGAAGAAGAAGGCTGAAGAAGGTTTACATTGGAAACGCCCATCAACTGATTTCCAGGATCCCAAACCTCTGAGTGAAATTCTGAAGGACAAAAGGACCATGGATTAGTGGGACGTGGCTGCAAGAAATGCAACAATTGAATTATGAGATTAAAATGACTAATGATTGATGATACTAATATTTTTACCTACGATAAAGGATAAAGTTGGCTGTTGGCCGTGTTTTCTTAGCATCCTTTACCGTGCTAGGTACAATGACCCTGTTTTTGCCATTGGTAGATGGTATAGATTTTCGTTCGAGTGAGTGGAAGGTTTTTGAGGCCTGAGGCGGCTAAGATAGATATTAGATAACCAGTGTTTGAATATGTTGATTTGGACAGGACATCTTAGTTGAATATGTTGATTTGGACAGGACATCTTAACCTAGAGAGCATATTACTGATTTACATTAATTTTACGTGTGATTTTGGC