Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_06862 LG1 99574066 99577322 protein Dr1 homolog isoform X4
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated
Cellular Component   located in   nucleus, nucleus, nucleus, nucleus, nucleus, nucleus, nucleus, nucleus
Molecular Function   enables   protein binding, transcription cis-regulatory region binding, protein heterodimerization activity, transcription cis-regulatory region binding, protein binding, DNA-binding transcription factor activity, transcription cis-regulatory region binding, transcription cis-regulatory region binding
Pathway   B 09182 Protein families: genetic information processing   C 03021 Transcription machinery [BR:ko03021]
SNP Position Effect Amino acid change
C/T 99574122 synonymous_variant p.Ala19Ala
A/G 99574131 synonymous_variant p.Leu22Leu
T/A 99574177 upstream_gene_variant
T/C 99574195 upstream_gene_variant
T/C 99574199 upstream_gene_variant
T/A 99574266 upstream_gene_variant
G/T 99574377 upstream_gene_variant
T/G 99574410 upstream_gene_variant
G/T 99574477 upstream_gene_variant
A/T 99574516 upstream_gene_variant
C/G 99574656 upstream_gene_variant
G/T 99574741 upstream_gene_variant
C/G 99574958 upstream_gene_variant
C/T 99575222 upstream_gene_variant
G/T 99575261 upstream_gene_variant
G/T 99575264 upstream_gene_variant
G/C 99575552 upstream_gene_variant
G/A 99575571 upstream_gene_variant
A/T 99575683 upstream_gene_variant
T/A 99575694 upstream_gene_variant
T/C,* 99575706 upstream_gene_variant
T/C,* 99575710 upstream_gene_variant
T/C,* 99575712 upstream_gene_variant
T/C,* 99575714 upstream_gene_variant
T/C,* 99575716 upstream_gene_variant
T/C,* 99575720 upstream_gene_variant
A/G 99575747 upstream_gene_variant
C/T 99575765 upstream_gene_variant
G/A 99576210 upstream_gene_variant
A/T 99576214 upstream_gene_variant
G/C 99576576 upstream_gene_variant
A/C 99576600 upstream_gene_variant
C/T 99576638 upstream_gene_variant
A/T 99576847 upstream_gene_variant
A/C 99577097 upstream_gene_variant
G/A 99577247 synonymous_variant p.Ala110Ala

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_06862.1
MTKIIKEMLPPDVRVARDAQDLLIECCVEFINLISSESNEVCNREEKRTIAPEHVLKALQVLGFGEYIEEVYAAYEQHKMETMDSLKGGKWSNGAEMTEEEALAEQQRMFAEARARMNGGGITSKQPDTDQSLDS*


CDS Sequence:
>Vu_06862.1
ATGACAAAAATTATTAAAGAAATGTTGCCCCCAGATGTACGTGTAGCAAGAGATGCCCAAGATCTATTGATCGAGTGTTGTGTAGAGTTTATAAACCTCATCTCGTCAGAATCCAATGAAGTCTGCAACAGAGAGGAAAAACGGACAATTGCACCTGAGCATGTATTGAAGGCTCTACAGGTTCTTGGATTTGGTGAGTACATTGAAGAAGTTTATGCAGCATATGAACAACACAAAATGGAGACCATGGACTCTTTAAAGGGTGGTAAATGGAGCAATGGAGCTGAGATGACCGAGGAAGAAGCATTAGCAGAGCAGCAAAGGATGTTTGCGGAGGCACGTGCTAGGATGAACGGTGGAGGCATTACTTCCAAGCAGCCAGATACTGACCAAAGTTTAGATAGCTGA


Promoter Sequence:
>Vu_06862::LG1:99572066-99574066(+)
CATAATTTTCTATATTTAATAAAAAAATTAATTATATTTTTTATTTTATATAACTTAATATTAGCATTATTAAGTTTAAATTCAGTATATTTAAAATAATTTAGTTTCTATTGTTTTTGTTAAATAATTATTTTTTGCAACTTACTAGATATTTAAAGAATGAGGATATCTCTCTTAGAACTTGGACTCCCCTACCACTCTTTAAAATTTATGTTGTTTAATTTTTTTAATCGGCGTAACTATTATCTTAGGCATTTTATTTTATTGTTTAATAAAAATATGAATAGTTGTAGTTAACATAAAATAATTTTACAGTTAATATTTAATAATAAAATCTCATAATGTCGAAGAAAGTAAGATATTAGAATAAAATATCATACATGTTACCAAAATAACAAAAAAGTTAAATAACAGAAATTTAATTAAAATATATAAAGATTTAAATATTCAATAATTAAAACAAATATAATGAGAAAATACTTAAATAATTCATGAAACTTAATCAAGCGAAAACTAAAATAAAAGATATGATAATTTTATAGATAATTGATGAATTTGTAAAAAAAAAACAGACAGAAAATGTTAAGCCACGCGCCGAAGGAAAGCGCGTGGGTGAAGGCATCTGGTAAACGCGTTTGGGGCAGTGTGGGTTGCCCTAATCGGATGCGAGCGAGAACTGGTTCTCTTATCCTGTGAAACTGTCATCATAAATTCATATATCAGCCTTAGCCATGTCCTCGCTCTCGCACCTTCTCTTCCCTCCGCAACTACGAACTTCAATCGCGCCTTCTGGGATTCTTCTCCCTTATCGATAATAGGTAACTTCTCCTTTTCGTTTTCCATCTCAGATCTGTAATTGTTTTCCCTGTTCGTTTATGTATCTGTGCCCTAATTATTCGTTTCGTTCGATTCTAGGTTGAATCATGGAGCCTATGGACATAATCGGCAAATCAAAGGAAGACGCTTCGCTTCCTAAAGGTTTTCCCCGTCGCTCTCCTCTCTTTCAATAGCTATTATAATCATATCGAGTTCTTTGGAACTGGTTGTTATTTGCACAGGTGAATTCTGGAGACTGCAGAAAAAACAAAAAAGATAAATTGTCCGCAATATGTCTAGGTTTTTGTGACATTTAGGGCCAATATCTCGTTATGTATATTTTTCCTTTGCAAATGCCTGAGTATGAGCTTTCCGCAACCTAATTCACTTGATAAAACTTTTTTCTTAACTGCACTCATAGTGAGATTATAATTAATTCCAAAAGTTGTGTTTGTGATTGATGGTGTTCATTGGCAATTCAACATTACACTATCATACTTGCTGGAAATCTCGATGGTAATTCATGATTTTTAAAATTTCCTTTTTATGTAATGTTAAAAGTTTAACGTGGTATAAAATTTAATAAAAGAGTTGATTTTCAGTATACAGGTTTCAAAGAGAGACTAATTATGTATTTCATTATTTTTAATTATTTTTATTTCGCATGAAGATACATGGATGGATTGGAACAAAAGTTAAGTTCCATTAAGATCTGAGCATGTCTATTTGACTCACTCTGAATAATATATTTTATACTGTTTATCATATCTGATTATAGAAAATGGCTTTCTTGCAGTTTTCTGTAAGGCACTGATTTGATACCCAGCAAGCCTATGGTAGTTTCATGAAGATTGTATTATTATGTTATTCACCAACGGAATTTGGTTTTGCTATTATAATAATATTTCTTACTAGCGTTTCTACTTTGTTTTTATTGATCTTTAAAACTTAAGTAGTTCTCATATCAAAACAACTATATTTAAAATTTAATTACCAGACGACTGTGATAATTAAAGGTTTTTTGAGCAGGTTTAATTGATAAAATGTTGCTAATTAATAATGAATAGTGATGTTTGGTTCTTTTAACTTCTGGGGTACTTGATAGTCAATCTATGTTTTCTTTTTGATTGGCAATGCATTATTGTGTATTGCTTACAGAATCTCTGATTTTTTGGCAGCAACAA


Gene Sequence:
>Vu_06862(+)
ATGACAAAAATTATTAAAGAAATGTTGCCCCCAGATGTACGTGTAGCAAGAGATGCCCAAGATCTATTGATCGAGTGTTGTGTAGGTCAGAATTTTATAATCAATGATAGTTTCCTTCCCACTATATTGTGTTTGATTGGTTGACTTAATTCTTTTAGTTTTAGGAAATCAGATATAGTGTCGTGTACTATTTTTATTTTTCTGATGTCTGAGAAGGTTATGGTCTCCTCCATTGAAGCCATCGTACCATCTCGTTGTCATGCCTTGGATGGTGTCCACTGCAGCAGCATTCATGGCTATTTGCGGCATTAGTGTTTTCTAAAACCCCATATACCCTCTACTACTGCTTTGCTTGAGATTTTTTTTTTGTTTTTTTTCTTTCCTCATTGTTCAAAATTTGAAACCCTACTCGGAAACAGTCATATGCCCGTGTCTCTGAAACACAGACCAATATTCTTTGGCACCAACAGTGGCCTGTTGTGATGTCTTGTGGCACTTCCTGCTGTTTCTGGCCTTGCCCTATTCTGTGGCACTATTTCCAATGTTCTGTTGTGTTGTTTGTATTCTGTTCATTCTCCCCGTTTTGTACTCTTCATTTTGTTGCAGTATCTGACCGATTGGTCCTTCTTCATTTCATCTATATTTGCTGTTACCTAACCCTATCATACCATATTAGCTGTGAATTACTAGAATCTGTAGTGTAATAAAATTGTTGGTGATAAGCTATTTTGAACTTCCTGTCTGTTTTTTCATAGTTCATGTTGAAGTGACACAATTGTTATATCTATATTGTGGATATGCTGAACGTGTGTGTCAATTCTTTTATTGTCTAAAACTTTTTTTGTTGAAATTCTCTTTAGAATTTTCTGCTTCATATTCTTAGTTGACTTTTCTCAATAATTAAGATGTTAACCAATTTGTCATTGTAGAGTTTATAAACCTCATCTCGTCAGAATCCAATGAAGTCTGCAACAGAGAGGAAAAACGGACAATTGCACCTGAGCATGTATTGAAGGCTCTACAGGTATTTTGTATTTCTATAGCTTCGCTTGTGAATATTTCCTACTTTATATTTGAATGTTTATGTCATTTCACACCATGCTTTATCTTAGGTTGTATTTTGTTTGGGTATGAAGATTTCATTCAATATAGGTTCCTTAGTTACTCAGTTTAAAGAAGCAGAGTTGAAAGGATTGAAGATTAGTGATTTAAAATTAACAATTTTTTCTTTCGTCTGGGCCGAAATTTGCATCCAAACAAGGATTTATGTCTTCATGGTAAAAATGGCTGTAATAGTTAAATAATTGCATTCTTGTCTATGATGAGACTGAGCACAAGTTGCTGACACTTGAAATTAAAATACTTGGTAGCTGATTGGGCTCGTCTTACAGATTTATTATTTGATCCCACCAAATGTTCTCTTAAAGGGAGTAATACAGTAATGAGAAAGAGAAGAGAATTTGTAGAAATAGAAATTGTTTTATTGGATTACTTGTTTGAGGTACGTATATCTATAAAGAAGTAGTAGCTTGTTTTGCAAGCTTTGCTGACTAGACTTTTATATCTAATTAACTCAGCTCAGCATAACTGACTTGATTAGTTTGATGCAACTTTGCTAACTAACTAACTAACTATATATATATATATATATATATATATATATATATATATATATATATATATATGTATATATATGTAACTGACAGCTCGGCATAACTTCAGCTAGTTAGTTGCAACAGATGCTGACTAGGCACCTATAACACTAAGTGTTTAAATAGCTAGCATGACTATACTCCATCTTATCATCTCCCATCCACCACACACACATAAGATATCACCCTATGAGTACTAGTAATGATACATCCACCTAATAATTTGTAAAAAGGAGTTAAGTTAAAAAATAAGTGCATTTATTATCTTAAAAACATTAAAAACGTACTTTCTTCATCTTGTAAGGAGGAGGATGCTGTAACAAGATTTAGAATTATTCTTACCTTACCCTGAACCCCAAAGTAGCTGTTGCTCTTTCCTTGAAAAATGAGAGTGGTATCCTGCTGAGTGTTGATAATATATAGATCATAGGAAGATGCATGCTCTCTGCTATATATTTTACATGTATATTTTACTTTAAGAGTGACTTATTAGTTGAAAAGAAACGGAACAGTTCTTTTAAAAGGAATTATTTTCTATTCTGTTGTTACAAGTGTTCCAAAATCATAGATTCACCGAATCCTTTAAACATGTTGCATACCTGTTTCTGATTTTGTTTATATATTTGCTCCTTTCCCCAGGTTCTTGGATTTGGTGAGTACATTGAAGAAGTTTATGCAGCATATGAACAACACAAAATGGAGACCATGGTAATTATTAATATTAATGTCTCATCTGCATGTTGAATACTTGAGCGATACAATACAACTTAGCATATTCACTTTCTTGAGTCCTTGTCCAACACCTTAATTTCTGCACGGGTGGACACTAGAAAATAAAAAATGTAAACCTAGGGTGCTGTGTTATATATGAACGATGTTTATATTTCCATCTCAAACAATCTTAGTGCAAGCTAAACTTGCATTTTCCAACTGGGGTCAGATGAAAGAGGGACTATCTTAAGGGAGAACCTGCTGGCCTCGTTGATGGTTCTTCTCTCAAGAAGCCCCCAAACTTTTCATAGGTCCATTTAATGTATTCCGTGGGTAGATAGGCATGTGGAAATGGTATGTGGGTAAATTTTGCCGGAAAGATCTTAACAGACTGGTAGTCTGATCTGACTTGTCTGACATACCTTCCCTTCCCACCTGGTGTTTTCAGAACATGTTGAGAGCATGATGGTCTGTGCCATGGTTGGCTGTTGAAATAAAAAATTATCTTAACGAACTTCAGCAGGTTTTGTTGTCCTTGTATTTGTATTGGAAGCCTGGTGAGCCTGTATTGTTGATTAGTATGGAAAAGTGAGTTTTGGACCAGTTGATTGCTGTTGTATACGAATTAAGCTGTTTTCTGATCAGTTAATGTGGAAAGTGAATTTTGAACAAAGTTAATTGTTGTTAAATATGAATTTAACTGTTTCTGTTATTGTTTTTAATGTCTTCCAGCAGGACTCTTTAAAGGGTGGTAAATGGAGCAATGGAGCTGAGATGACCGAGGAAGAAGCATTAGCAGAGCAGCAAAGGATGTTTGCGGAGGCACGTGCTAGGATGAACGGTGGAGGCATTACTTCCAAGCAGCCAGATACTGACCAAAGTTTAGATAGCTGA