Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_06796 LG1 98894856 98897279 PREDICTED: uncharacterized protein LOC108335682
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated
Cellular Component   located in   nucleus
Molecular Function   enables   DNA-binding transcription factor activity, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding
SNP Position Effect Amino acid change
G/A 98894909 3_prime_UTR_variant
T/A 98895082 3_prime_UTR_variant
C/T 98895120 3_prime_UTR_variant
T/A 98895219 missense_variant p.Glu534Asp
G/A 98895225 synonymous_variant p.Thr532Thr
A/T 98895231 synonymous_variant p.Ala530Ala
G/T 98895251 missense_variant p.Leu524Ile
C/A 98895398 missense_variant p.Gly475Trp
T/A 98895685 missense_variant p.Lys379Met
G/A 98895862 missense_variant p.Ala320Val
A/T 98896203 missense_variant p.Asp206Glu
C/G 98896329 missense_variant p.Arg164Ser
T/G 98896335 missense_variant p.Arg162Ser
C/A 98896336 missense_variant p.Arg162Ile
C/T 98896458 synonymous_variant p.Glu121Glu
C/G 98896645 missense_variant p.Gly59Ala
C/A 98896742 missense_variant p.Gly27Trp
A/T 98896855 5_prime_UTR_variant
G/A 98896868 5_prime_UTR_variant
A/C 98896944 5_prime_UTR_variant
G/T 98897029 5_prime_UTR_variant
T/C 98897130 intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_06796.1
MEGDQIQEFKHACKFCGKCFPCGRSLGGHMRSHITNLSSEEKEKLPTRKLFSSSLNNDGDKDSEAAATNAGYGLRENPKKTWRISDHSSEDALVFDKFCKECGKAFHSWKALFGHMKCHSEKERASDSLEDQDSWTNAKVVMDSQSDNEATAPNKRRRSKRRTRYTVASAAATSSVVSFANPSSSLSEVEQEQEEVAMSLMMLSRDVSPWSGPHSVAESSDNNSAYFEARSSVRTNLVAKFDGSTDFTPNTARMIKQSDNKWEVGNSENPSSIRGKSSQRLTTTAATVETTENGFGANKSGVSSKGYEKVNNSELQYVSALEDSEGERGRSRVNEPESILSKSAATGNKYNSIKTKLIGSELKSNKNWADKASEPESSKNSHKRGKFECTTCNKTFHSYQALGGHRASHKKIKGCFASKNESSENSIETDLSPDPITTEHKLVNSTDREYLGEHQQGAGFHDEVETVTESKKSKGHECPICLKVFPSGQALGGHKRSHMTGGSESRNFQTVVLQEPVAEIRDFLDLNLPAATEEESNSHADSNRPWWVVQDNHKQEALVGLIL*


CDS Sequence:
>Vu_06796.1
ATGGAAGGAGATCAAATTCAAGAATTCAAACACGCGTGCAAGTTCTGCGGCAAGTGCTTCCCTTGTGGCAGATCCTTGGGGGGCCACATGAGGTCTCATATCACCAACTTGTCGTCGGAGGAAAAAGAAAAGCTTCCGACGAGGAAGCTTTTTTCGTCGTCTCTCAACAATGATGGAGACAAAGATTCCGAAGCTGCTGCAACCAACGCTGGCTATGGCCTCCGAGAGAACCCCAAGAAGACTTGGAGAATCTCGGATCATTCGAGCGAAGACGCTTTGGTGTTTGACAAGTTCTGCAAAGAGTGTGGCAAAGCGTTCCACTCTTGGAAGGCCTTGTTTGGTCACATGAAATGCCACTCCGAGAAAGAGAGAGCTTCTGACAGCTTGGAAGATCAAGATTCGTGGACTAATGCTAAGGTGGTCATGGATAGTCAGTCTGATAACGAAGCAACTGCTCCAAATAAGAGAAGAAGGTCCAAGAGAAGAACAAGGTACACGGTTGCTTCTGCCGCAGCAACTTCTTCGGTTGTGTCTTTTGCCAATCCTTCCTCTTCTCTCTCTGAAGTTGAGCAGGAGCAAGAAGAGGTTGCTATGAGCTTGATGATGCTCAGTAGGGATGTGAGTCCTTGGAGTGGTCCTCATTCTGTTGCCGAGTCCTCTGACAACAACTCTGCTTATTTCGAAGCTCGATCTTCGGTTCGAACTAATCTGGTTGCCAAATTTGATGGCAGCACTGACTTCACGCCTAACACGGCAAGAATGATCAAGCAAAGTGATAATAAGTGGGAGGTTGGGAATTCGGAAAATCCCAGCTCAATCAGAGGAAAGAGTTCGCAGCGTTTGACTACTACTGCTGCTACTGTGGAGACTACTGAAAATGGATTTGGAGCGAACAAAAGCGGAGTTTCTAGTAAAGGATATGAAAAGGTCAACAACTCTGAGCTTCAATATGTGTCTGCATTGGAGGATTCAGAAGGGGAACGTGGGAGGAGCAGAGTCAATGAACCAGAATCAATTTTATCAAAGTCCGCTGCTACCGGCAACAAGTACAATTCGATCAAGACAAAGCTTATCGGCTCTGAATTGAAGTCAAACAAGAACTGGGCGGACAAGGCTTCAGAACCTGAATCAAGCAAGAACTCTCACAAGAGAGGCAAGTTTGAGTGTACCACTTGCAATAAAACCTTCCACTCATACCAAGCTCTTGGAGGCCATAGAGCTAGCCACAAGAAGATCAAGGGATGCTTTGCTTCGAAAAATGAGAGCAGCGAAAACAGCATTGAAACTGATCTCTCTCCTGATCCAATAACAACCGAACACAAGCTCGTGAACAGCACTGACCGTGAGTATCTTGGGGAACACCAACAGGGTGCCGGTTTTCATGATGAGGTGGAAACAGTTACTGAATCCAAGAAGAGCAAGGGGCACGAGTGCCCAATTTGCCTCAAAGTTTTTCCATCAGGCCAAGCCTTGGGTGGCCACAAGAGATCTCATATGACTGGTGGGTCTGAGAGTAGAAACTTTCAAACAGTTGTACTCCAGGAACCAGTGGCAGAAATCAGGGACTTCCTTGATCTTAATCTTCCCGCTGCTACCGAGGAAGAAAGCAATAGTCATGCTGACTCTAACAGACCCTGGTGGGTAGTACAAGACAACCACAAGCAGGAGGCACTGGTAGGCCTGATCTTATAG


Promoter Sequence:
>Vu_06796::LG1:98897279-98899279(-)
ATTGAAAAAATCAGAACGTCTTTAAACAATTTGCCTTTGTAAAAAGTTGAGTCATTGACATGTTCACTTTCACGCAAAGGTTCATTCAAGATCTCTTCAATTTCACCATTTTCACTAACCTCTCTAATTTCATCATCTGCATATGTTGAATCATCTCTAAAAAAAACTCTCCAGGCCAATTACCAATTCTTTCGGATGTCATTATGCTTGTGAAAATTAGATAAAATTATATACGACAAAAATTATAAAATGAAAACTCATTTTAAAGTCATTATAAAATGAAAACTCATTATAAAGTCATTTTTTTTGTAAGAAATTGTTTAACAACGAGTGTTTCTGATTTTTTTCAACCAATTACCAATTCCTTTGATGTCATTATGCTTGTGAAAATTAGATAAAATTAGATAAGACAAAAATTATAAGATGAAAACTCATTATAAATCATTTTTTTGATAAGATTGTTTAACAACAAGTGTTTCTGATTTTTTCAATTGGGGCTACAGTAGGATGACAGAGAGGAAAAATTGAAGTGAGAAAGATGAAACAGAAAGGGTTGAGAGGAATGAGAGAGGTGAGTAAGGGTATGGGGATTTCTTTTTTCTTTTTAGTTTTGATACCTTTAACCTTAAAACTTAGAATTCATAATATATAAGGGTATTTTTGTCTACTAAAACTCGATACACATTATTAAAATGTACCAAAAAAGAGAGGTACGCGCGTGTGCAAATCCCTGTGTATATATTTACATAACATAAATTTATGCGATGTTTTAATGACAGTAAATGTATATTTGACCTAGCTTTTTCACCTGCATCGTGGGTTCTCTCTTGTACTATTAGGTGTATGAATATAAACCTGTGAACTAATTAATAACAGAAAGAAGAATCTGAATACTGCATTTGGTAAATTTCAGTGCTAAGAGCAATTTATTACTCCGTTGCGACATAATAGAAAAAAACGCATCACTGGTTTTCAGGGGGTGTGGGTGGGGACATACCACAAATTTTATCCATTGAAAATACTTGAAATGACAACGACCCAAAATTATATGATTTTAATCATTTATGTGTAACGTCAATATTGGAAATTGATCCTTCACCAAATTATCATTTCTCTCATACTTTTATTTAAGAGTTTGTACGTGTGATATGAAAGAAAATTCAAAAACAGGGAAACACCCAGACCCAACATGTTTCCCTTAAACTTAATTACAATTAGCATTGCTTTACTGATACAAACTATGCCTTACAATTTTTATCCAACTTCTTACTCTTAAATGCTTTTCAGAGTCCACCTAACCAATTTAAACAATTCCTGTCATGCCAAGCGAATTTAGCTGTATCTCTGTTGCCCTTAAAGAAAAAAATATCACATTATAAGTACTAATTTCTCATCCTATATATGTTTAGGTACGTTAAGAAGTGATATTTAAATTTAAATGAATTTACAAGATGTGAAAGAAAAGGAAGATATTAAGTAGAGAAAGATTTAATATTTAAGAGAAGGTGCATGCTGAGCGACTAAGGGGAAAAGGAGGTTGAAAAGTAGAAGAAGCTAACTTAAGAGAGTTGGGGAGTTTTGGTTTACGAAAATGCCCTCGAAACGTGCCAAAGAGAGAATCAGGAAACAGTGGGCATAGGAGCAGGCTTTGCATGGGCCCCACTTCAAAATCTTTTCTAATTTCTCAAATAAAAACCATTCACTAATAGAAAGTCCAAAGAATAACGGCCGGAGGGTGGAACCTTTCACTTCAAGTGTGAGAAAGTGAGTGGTGGAAATAGCAATAACCATTTCCTTAATAGCAAGACAAAGGAAGGAATAGTTGGGGTTCCAGTTAGTTTTCGTAGGTTCCTCGCCTGTTGGATGATGACGTGGACACATCTTATACCGTTCGATTAGGAGTGGAGTAGTATTCTCAGTTGAGTACACGTGCTGCTATCCTCTCTCTCTTCACCACTCCCTCTTTTTTATCTTTGCTTCCATGCATGGATTTCTCCTCC


Gene Sequence:
>Vu_06796(-)
AAATATAGTCAAGTAGAGAGAAGAGAGAGAATTCATCTCTCTCCCTATTTTTCTCCTCTCTTCCCTTCTTCTTCTTCTTCTTCGCCATCATTGCCAACAAAGGTAACCACATCTCTTCCAAGTTCTCATTTTTTCTTCCAAACTCAACTAACCATAATCCTGCTTCTTCTACTTTGCTTTCCTTCACTTCTCATTCTACATCTCTTTCCTTTTTCCTCTTTTTCTTCCTTAGATTTCCAAATTTTGTGGGCACTCCAAGAACCTCAGTGCAAAAGGGTACCCTGATGCAGCTTTTCGCACTTTCACATCAATAATCTGATCTGGGTCTCTTCGGTTGTACTTTTCTTCTTCTCTGATTGGTGTCACGAGATCGATGAATTCAGCATTCCTGGACTCTCTCTGATTCGGCCTCCAATCAACGGCCTACCCTTTTGCTTCACTGATCCGTGACCGAATTCAATGGAAGGAGATCAAATTCAAGAATTCAAACACGCGTGCAAGTTCTGCGGCAAGTGCTTCCCTTGTGGCAGATCCTTGGGGGGCCACATGAGGTCTCATATCACCAACTTGTCGTCGGAGGAAAAAGAAAAGCTTCCGACGAGGAAGCTTTTTTCGTCGTCTCTCAACAATGATGGAGACAAAGATTCCGAAGCTGCTGCAACCAACGCTGGCTATGGCCTCCGAGAGAACCCCAAGAAGACTTGGAGAATCTCGGATCATTCGAGCGAAGACGCTTTGGTGTTTGACAAGTTCTGCAAAGAGTGTGGCAAAGCGTTCCACTCTTGGAAGGCCTTGTTTGGTCACATGAAATGCCACTCCGAGAAAGAGAGAGCTTCTGACAGCTTGGAAGATCAAGATTCGTGGACTAATGCTAAGGTGGTCATGGATAGTCAGTCTGATAACGAAGCAACTGCTCCAAATAAGAGAAGAAGGTCCAAGAGAAGAACAAGGTACACGGTTGCTTCTGCCGCAGCAACTTCTTCGGTTGTGTCTTTTGCCAATCCTTCCTCTTCTCTCTCTGAAGTTGAGCAGGAGCAAGAAGAGGTTGCTATGAGCTTGATGATGCTCAGTAGGGATGTGAGTCCTTGGAGTGGTCCTCATTCTGTTGCCGAGTCCTCTGACAACAACTCTGCTTATTTCGAAGCTCGATCTTCGGTTCGAACTAATCTGGTTGCCAAATTTGATGGCAGCACTGACTTCACGCCTAACACGGCAAGAATGATCAAGCAAAGTGATAATAAGTGGGAGGTTGGGAATTCGGAAAATCCCAGCTCAATCAGAGGAAAGAGTTCGCAGCGTTTGACTACTACTGCTGCTACTGTGGAGACTACTGAAAATGGATTTGGAGCGAACAAAAGCGGAGTTTCTAGTAAAGGATATGAAAAGGTCAACAACTCTGAGCTTCAATATGTGTCTGCATTGGAGGATTCAGAAGGGGAACGTGGGAGGAGCAGAGTCAATGAACCAGAATCAATTTTATCAAAGTCCGCTGCTACCGGCAACAAGTACAATTCGATCAAGACAAAGCTTATCGGCTCTGAATTGAAGTCAAACAAGAACTGGGCGGACAAGGCTTCAGAACCTGAATCAAGCAAGAACTCTCACAAGAGAGGCAAGTTTGAGTGTACCACTTGCAATAAAACCTTCCACTCATACCAAGCTCTTGGAGGCCATAGAGCTAGCCACAAGAAGATCAAGGGATGCTTTGCTTCGAAAAATGAGAGCAGCGAAAACAGCATTGAAACTGATCTCTCTCCTGATCCAATAACAACCGAACACAAGCTCGTGAACAGCACTGACCGTGAGTATCTTGGGGAACACCAACAGGGTGCCGGTTTTCATGATGAGGTGGAAACAGTTACTGAATCCAAGAAGAGCAAGGGGCACGAGTGCCCAATTTGCCTCAAAGTTTTTCCATCAGGCCAAGCCTTGGGTGGCCACAAGAGATCTCATATGACTGGTGGGTCTGAGAGTAGAAACTTTCAAACAGTTGTACTCCAGGAACCAGTGGCAGAAATCAGGGACTTCCTTGATCTTAATCTTCCCGCTGCTACCGAGGAAGAAAGCAATAGTCATGCTGACTCTAACAGACCCTGGTGGGTAGTACAAGACAACCACAAGCAGGAGGCACTGGTAGGCCTGATCTTATAGCCAAAGGTGACATAGTGTATTCCATCAGTGCTGCTACTTCAGAGTGAAGATTCAAACTGTATAGAGATGTTTCTGCATTCATTTCATTAATTCTTTACAGGCTATGCTTCTTCTTCTTCTTCATCATCAGGGTATTTCTATTTTTGTTCAGTTTTTTCAATTAGCTCATAACACACTGTTTTCTTCCTCTTCTGGTTTCTTTTTTTTTTTCTTTTTTTTCCCGTGTGCCATATGTTATTGGTAGAATAAGTTTCAGTTCAGAAAAGTTCAAGC