Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_06785 LG1 98805564 98809091 PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g74360 isoform X2
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   multidimensional cell growth, protein phosphorylation, defense response to nematode, defense response to nematode, seed germination, protein phosphorylation, defense response to nematode, protein phosphorylation
Cellular Component   is active in   plasma membrane, plasma membrane
Cellular Component   located in   plasma membrane, plasma membrane, mitochondrion
Molecular Function   enables   protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein binding, protein serine/threonine kinase activity, protein binding, protein binding, protein binding, protein binding
SNP Position Effect Amino acid change
T/G 98805578 missense_variant p.His5Gln
C/T 98805683 synonymous_variant p.Leu40Leu
T/A 98805722 intron_variant
A/G 98805741 intron_variant
A/T 98805750 intron_variant
G/A 98805753 intron_variant
T/G 98805754 intron_variant
C/T 98805758 intron_variant
G/A 98805864 splice_region_variant&intron_variant
G/A 98805929 missense_variant p.Val70Ile
T/C 98806214 stop_lost p.Ter165Argext*?
T/C 98806361 missense_variant p.Trp214Arg
T/A 98806377 missense_variant p.Leu219Gln
T/A 98806710 missense_variant p.Leu330His
A/T 98807056 stop_lost p.Ter445Cysext*?
C/T 98807062 synonymous_variant p.Cys447Cys
G/A 98807323 missense_variant p.Met534Ile
T/A 98807547 missense_variant p.Val609Asp
A/T 98807646 missense_variant p.His642Leu
A/T 98807651 stop_gained p.Lys644*
G/C 98807693 missense_variant p.Glu658Gln
G/A 98807966 missense_variant p.Ala749Thr
T/C 98808051 missense_variant p.Phe777Ser
C/A 98808052 missense_variant p.Phe777Leu
T/A 98808223 missense_variant p.His834Gln
G/A 98808246 missense_variant p.Ser842Asn
G/A 98808260 missense_variant p.Val847Ile
T/C 98808264 missense_variant p.Phe848Ser
C/T 98808269 missense_variant p.Arg850Trp
G/A 98808271 synonymous_variant p.Arg850Arg
T/C 98808272 stop_lost p.Ter851Glnext*?
C/T 98808283 synonymous_variant p.Gly854Gly
G/A 98808287 missense_variant p.Glu856Lys
T/C 98808296 missense_variant p.Ser859Pro
C/T 98808308 missense_variant p.Pro863Ser
C/G 98808309 missense_variant p.Pro863Arg
G/A 98808312 missense_variant p.Gly864Glu
G/A 98808318 stop_retained_variant p.Ter866Ter
T/A 98808328 synonymous_variant p.Ile869Ile
A/G 98808332 missense_variant p.Ser871Gly
G/A 98808333 missense_variant p.Ser871Asn
G/A 98808336 stop_retained_variant p.Ter872Ter
G/A 98808341 missense_variant p.Gly874Arg
C/T 98808348 missense_variant p.Ser876Phe
G/A 98808366 missense_variant&splice_region_variant p.Cys882Tyr
C/T 98808391 upstream_gene_variant
C/T 98808395 upstream_gene_variant
C/T 98808398 upstream_gene_variant
G/A 98808403 upstream_gene_variant
G/A 98808404 upstream_gene_variant
A/C 98808412 upstream_gene_variant
G/A,* 98808414 upstream_gene_variant
G/C 98808416 upstream_gene_variant
A/G,* 98808419 upstream_gene_variant
G/T 98808420 upstream_gene_variant
C/T 98808443 upstream_gene_variant
A/G 98808444 upstream_gene_variant
G/A 98808468 upstream_gene_variant
G/T,* 98808476 upstream_gene_variant
G/A 98808477 upstream_gene_variant
A/T 98808480 upstream_gene_variant
C/T 98808486 upstream_gene_variant
G/A 98808542 upstream_gene_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_06785.1
MSFSHTEKQEEKQYVKKKREGKLLIATLMSEQEPHSCGLLLFFFLILLSGKVVIGESLETDREVLLKLKSYLDSKTLQDKGAYTHWNTSSSNPCEWSGISCSATGRVVRIGLSQSDITGEIFKNFSQLTELRYLDLSQNTLSGEIPEDLRRCYKLVHLNLSHNILEGELNLTGLTSLHTLDLSNNRFFGDIGLNFPAICDNLVTLNVSGNNNLTGKIENCFDKCLKLQYLDLSTNSLSGSLWMKFARLKMFSVAENHLSGTIPLEALPLNCSLEELDLSQNGFVGEAPKGVANCKNLSILNLSSNKFTGGIPVEIGSISRLKALYLGNNTFSREIPESLLNLTNLTFLDLSRNQFGGEIQEIFGKFRQVSFLLLHSNNYTGGLRSSGILTLPNLWRLDVSYNNFSGPLPVEISQMSSLKFLMLCYNQFNGSIPPEFGNMTQLQALDLAFNNLSGSIPPTLGKLNSLLWLMLANNSLTGEIPPELGNCSSLLWLNLANNKLSGKLPSELSKIGRNATTTFEYNRRNYRMVAGSGECLAMKRWIPADYPPFSFVYDLLTRKKCRELWDKLIKGYGVFPFCTPGNSSRVTQISGYIQLSSNQLSGEIPPEIGSMVNFSMMHLGLNNLSGKLPREMGSVSLVVLNITRNEFSGEIPQEIGNMKCLMNLDLSYNNFSGMFPTNLNKLTELSKFNVSYNPFISGEVPSNGQFATFLEDSYLGNPHLILPRFLQNTSNDRNTTSQKDHKKSSRLPLLLVCAVITLVFIVCGLLTILVCVSVKGPSEEPRYLLRDTKQWHDSSSSGSSSWMSDTVKVIRLNKTVFTHADILKATGSFSEDRIIGKGGFGTVYKGVFSDGRQVAVKKLQREGLEGEKEFKAEMEVLSGHGFVGYVAPEYGHTWQATTKGDVYSFGVLIMELAAARRAVDGGEECLVEWARRVMGYGRHHHRHHHGLSRSVPVLLMGSGLVGGAEEMTELLRIGVMCTADAPQARPNMKEVLAMLIKIFNLKDHSTYGYIV*


CDS Sequence:
>Vu_06785.1
ATGAGTTTTTCTCATACAGAAAAACAAGAGGAGAAGCAATACGTGAAAAAGAAGAGAGAAGGAAAACTCCTCATAGCAACATTAATGTCAGAGCAGGAACCTCATTCTTGTGGCCTACTCTTGTTCTTTTTCTTGATCCTTCTTTCAGGTAAAGTTGTTATAGGGGAATCCTTGGAAACAGACAGAGAGGTTTTGCTGAAGCTGAAATCGTACCTGGACAGCAAAACTCTTCAAGACAAAGGAGCGTACACACACTGGAACACCAGTAGCTCCAATCCTTGTGAATGGAGTGGAATTTCATGCAGTGCTACGGGGAGGGTGGTTCGCATAGGCCTTTCTCAGAGTGACATCACCGGTGAGATATTCAAGAATTTCTCGCAGCTCACTGAACTCAGGTACCTTGATCTCTCTCAGAACACGCTCTCTGGTGAGATTCCTGAGGACTTGAGGCGCTGCTACAAGCTCGTGCATCTCAACCTATCACATAATATTCTTGAAGGGGAGCTGAACTTGACTGGATTGACAAGCTTGCACACACTGGACTTGTCAAATAACAGATTTTTTGGGGATATTGGGTTGAATTTCCCTGCCATTTGTGACAATTTAGTCACTCTGAACGTCTCAGGTAATAATAACTTGACTGGCAAGATCGAAAACTGCTTTGATAAATGTCTCAAGCTGCAGTACTTGGATTTGAGCACCAACAGTCTGAGTGGAAGCTTGTGGATGAAGTTTGCGAGGCTCAAAATGTTTTCTGTCGCGGAGAACCATCTGAGTGGGACTATTCCTTTGGAAGCTTTGCCTTTGAATTGCAGCCTTGAAGAACTAGACCTTTCACAAAATGGATTTGTTGGTGAGGCACCTAAGGGGGTTGCTAACTGCAAGAATTTAAGCATTCTGAATCTTTCTAGTAACAAATTTACTGGGGGTATCCCTGTCGAAATAGGATCCATTTCCCGGCTCAAAGCATTGTACTTGGGGAACAACACCTTTTCAAGAGAGATTCCTGAGTCCCTTCTGAACTTGACCAATTTGACCTTCTTGGATTTGAGCAGAAACCAATTTGGTGGGGAAATACAAGAGATATTTGGGAAATTTAGGCAAGTAAGTTTTCTTCTGTTGCACTCAAATAACTATACTGGAGGGTTGAGATCCTCAGGAATTCTGACATTGCCAAACCTTTGGCGGTTAGACGTAAGCTACAACAACTTTTCAGGTCCGTTACCAGTTGAGATCTCTCAAATGTCAAGTCTGAAGTTTCTAATGTTATGCTACAACCAGTTCAATGGATCAATTCCACCGGAATTTGGAAACATGACTCAACTGCAAGCGCTTGACCTTGCCTTCAACAATTTGAGTGGGTCTATACCACCAACCCTCGGAAAGTTAAACTCCCTCTTATGGTTGATGCTAGCAAACAATTCTTTAACTGGAGAAATCCCTCCAGAGTTGGGAAACTGTTCAAGCTTATTATGGCTAAACCTTGCCAACAATAAGCTCTCTGGAAAATTGCCTTCTGAACTGTCCAAAATTGGAAGGAATGCCACGACCACATTTGAATACAATAGGCGAAACTATAGAATGGTTGCTGGATCTGGTGAATGTTTGGCAATGAAGAGATGGATACCTGCAGATTACCCTCCATTCAGCTTTGTGTATGACCTCTTAACAAGGAAAAAATGTAGAGAACTTTGGGACAAATTGATCAAAGGGTACGGTGTTTTCCCGTTTTGCACACCTGGTAATTCCTCTCGCGTAACACAGATATCCGGGTATATTCAGCTAAGTTCGAACCAGCTCAGTGGTGAAATTCCTCCAGAGATTGGGTCAATGGTCAACTTCAGCATGATGCACTTGGGGCTCAACAATCTCTCTGGGAAGTTACCTCGAGAGATGGGAAGTGTATCCCTGGTGGTATTAAACATCACAAGAAACGAGTTTTCAGGCGAAATTCCCCAAGAAATTGGCAACATGAAATGTCTGATGAATCTGGATCTGTCGTACAACAATTTCTCGGGAATGTTTCCAACGAATTTGAACAAATTGACAGAGCTTAGCAAGTTCAACGTCTCATACAATCCCTTCATATCAGGTGAGGTCCCATCAAACGGACAGTTCGCAACCTTTTTAGAAGATTCATATTTAGGTAACCCCCATTTGATCCTACCCCGGTTTCTTCAGAACACTAGCAATGACAGAAACACCACCTCTCAGAAAGACCATAAAAAGTCCTCAAGACTACCTTTGCTTTTGGTGTGTGCGGTCATAACACTGGTTTTCATAGTATGCGGACTTCTCACTATATTAGTCTGCGTATCTGTGAAAGGCCCTTCAGAGGAACCAAGATACCTCTTGAGGGACACAAAACAGTGGCATGATTCCAGCAGCTCCGGATCCTCATCATGGATGTCCGACACAGTGAAGGTCATCCGTTTGAACAAGACAGTTTTCACACATGCCGACATTCTGAAAGCAACTGGCAGCTTCTCCGAGGACAGAATCATAGGAAAAGGAGGGTTTGGAACAGTGTACAAGGGAGTGTTTTCAGACGGTAGACAAGTGGCAGTGAAGAAGCTTCAAAGGGAAGGCCTGGAGGGTGAGAAGGAATTCAAAGCTGAAATGGAGGTTCTGAGTGGTCATGGCTTTGTGGGGTACGTTGCACCTGAATATGGACACACATGGCAGGCTACTACAAAAGGGGATGTGTACAGTTTTGGGGTTTTGATCATGGAGCTTGCAGCAGCAAGAAGAGCAGTGGATGGAGGGGAAGAGTGCTTGGTGGAATGGGCGAGGCGTGTTATGGGTTATGGACGACACCATCATCGTCATCATCACGGCTTGAGTCGGTCTGTGCCAGTTCTGCTGATGGGTTCTGGGCTTGTCGGTGGGGCTGAGGAGATGACTGAGTTACTGAGGATTGGAGTGATGTGCACAGCTGATGCACCACAGGCCAGACCGAACATGAAAGAGGTTCTTGCTATGCTGATTAAGATATTTAACCTCAAGGACCACTCCACTTATGGATACATTGTTTAG


Promoter Sequence:
>Vu_06785::LG1:98803564-98805564(+)
TAAAAAATGACTTTATAATGAGTTTTCATTTTATAATTTTTGTCGTATATAATTTTATCTAATTTTCACAAGCATAATGACATCCAAAAGAATTGGTAATTGGCCTCGAGGGTTTTTTTTAGAGAAGTTGATTCAACATATGCAGATGATGAAATTAGAGAGATTAGTAAAAATGGTGAAATTGAAGAGATCTTGGATGAACCTTTGCCTGAAGGTGAATATGTCAATGACTCAACTCTTTACAAAGGTAAATTGTTTAAAGGCAAGTGTTTCTGATTTTTTCAATTGGAGCTACAGTAGGGATGACAGAGAAAATGTTGGAGTGAGAGAGATGAAAGAGAAAGGATTCAGAGGAATGACAGAGGTGAGTATTTCTTTTTTTTTTAGTTTTGAGAATGAAAATTATTAAAATACCCTTAACCTTAAAACATAAAATCTATGATATATAAGGATATTTTTGTCTACTAAAACCCGGTACACATTGCTAAAATGTACCAACTGAAAAACAGGCATACGCGCGTTAGCAAACTTATATATATATATATATATATATATATATATATATATATATATATATTAGAATCTTAAACAAATTATAGAAATTAAATTAAAAACTCACTCATTTTATAAATATTAAAAACATATTTAAATTTAATACAAGTGTAAAATTGATATCTATTTGGTGTAAATTTCTTTTCATTTTTTTTTTATCGTAACTGTAAAAGTCATGTAAAATATAATAACCGTAATACCCTTTATTCTAATTTTTATAGATACCTTTTATCTACTAATACTAATACTAATTCATGTAACCACGAAACAATTTTCCTAAGGAGAAGCATAATAATAATTACTTATACACTTTAAATTTATTATACTATTTTTAGATACAATTACACATCACTTAAAAAGTTATCATGAGATATTAAATTAAGTAAAAATACAATAAATAATAATAATAATAATGTTTATAAGAATCTTTAATGAAATGTTTCTTTTTTTTTGTTGATGTATATTACTTTTTGTTGGGATGAAAAAAATGATGGAAGAAAAAGTCAAAAAGCCATAAAAATGTTGACAGAAAAAAAAGGGTATTTCAATGTGGTGGTAGTAGACGAAGCTGATATGGACTGCATCACCAAAATTGTTGTGCGATGGTATGAGGTTCCTTTCGCTTTACTTGCCTTCACCAAAATCACTTATGACTATTCAAAACCACAAATAACATACACCATTCTTAACTACTTTCAATTTCATTCAACCTCGTCTAAATCCAACTGCCTTCTTACCTTATTATCGTATGCTGTCCCCTTAACAATGCCAAATTTTCCAAGAAATTCACAAAAAGGCATCTACCTTCAACCTCGAAAACGGTGGTCTCATTCTATTTATGACGTCATATAAACATTGTTTATAATACTTTTTGCCACATCAGTAATGTTATTACGTACTTCTTTTTTCCACATAAAACAAATGTAAAAACCTCCTATTACGAACAAGAATAAGGTAAACCGTGTTCTGCTTGTGCTGTTTTGTCGAGTCTTAGGTCAAACTGAAAGCCGTGATGGCCAATTTTGTTCGAACCGGTCAGCAACGGTCAGCAAGGGCGGCTCGACCGGTCTCTGGCTCCAAAACGTGAGCTTCTTTATCTTTTCCTTAGGCTACCGTTCGTAAATATGAATAGTTGAATAAATTAATGCCCCCAAAGTAGAAACACGCGAGCCATTTCACATTCGTTAACAAACAACATCAAGCAGAGCATACCCTTCTTTTGTTTTCACAAAATCATTGCAACCGTTCATTAAATTACAATAATTCCTAGGACCTGAAAACAAGTATCTTCAACGAGTAGACATATAATGCATAGGAAAATTCCTGTTGCGATTTCCTTTTTGTCCCCCTGCTGCTGCTGCACCTCCCAGTCCAACACGCTTCCCAATGACTTCAAATTCCTCACGTTCTTGAGTTACTCTTATTTTATTCTGGCAATCATCACCACA


Gene Sequence:
>Vu_06785(+)
ATGAGTTTTTCTCATACAGAAAAACAAGAGGAGAAGCAATACGTGAAAAAGAAGAGAGAAGGAAAACTCCTCATAGCAACATTAATGTCAGAGCAGGAACCTCATTCTTGTGGCCTACTCTTGTTCTTTTTCTTGATCCTTCTTTCAGGTACAGATTCTTCTCCATGTGAGGCTGTTATTTTCTTTATTGTATTCTTGAGGATTAGTATTATTTTATTGTGTTGCAAAGGTTGGTGATTCTGTTATATTAACTTCTGGTTTTGGGTTAACCGAGGCATTTCTTGTTTGGGTTTGGTTTTGGTAGGTAAAGTTGTTATAGGGGAATCCTTGGAAACAGACAGAGAGGTTTTGCTGAAGCTGAAATCGTACCTGGACAGCAAAACTCTTCAAGACAAAGGAGCGTACACACACTGGAACACCAGTAGCTCCAATCCTTGTGAATGGAGTGGAATTTCATGCAGTGCTACGGGGAGGGTGGTTCGCATAGGCCTTTCTCAGAGTGACATCACCGGTGAGATATTCAAGAATTTCTCGCAGCTCACTGAACTCAGGTACCTTGATCTCTCTCAGAACACGCTCTCTGGTGAGATTCCTGAGGACTTGAGGCGCTGCTACAAGCTCGTGCATCTCAACCTATCACATAATATTCTTGAAGGGGAGCTGAACTTGACTGGATTGACAAGCTTGCACACACTGGACTTGTCAAATAACAGATTTTTTGGGGATATTGGGTTGAATTTCCCTGCCATTTGTGACAATTTAGTCACTCTGAACGTCTCAGGTAATAATAACTTGACTGGCAAGATCGAAAACTGCTTTGATAAATGTCTCAAGCTGCAGTACTTGGATTTGAGCACCAACAGTCTGAGTGGAAGCTTGTGGATGAAGTTTGCGAGGCTCAAAATGTTTTCTGTCGCGGAGAACCATCTGAGTGGGACTATTCCTTTGGAAGCTTTGCCTTTGAATTGCAGCCTTGAAGAACTAGACCTTTCACAAAATGGATTTGTTGGTGAGGCACCTAAGGGGGTTGCTAACTGCAAGAATTTAAGCATTCTGAATCTTTCTAGTAACAAATTTACTGGGGGTATCCCTGTCGAAATAGGATCCATTTCCCGGCTCAAAGCATTGTACTTGGGGAACAACACCTTTTCAAGAGAGATTCCTGAGTCCCTTCTGAACTTGACCAATTTGACCTTCTTGGATTTGAGCAGAAACCAATTTGGTGGGGAAATACAAGAGATATTTGGGAAATTTAGGCAAGTAAGTTTTCTTCTGTTGCACTCAAATAACTATACTGGAGGGTTGAGATCCTCAGGAATTCTGACATTGCCAAACCTTTGGCGGTTAGACGTAAGCTACAACAACTTTTCAGGTCCGTTACCAGTTGAGATCTCTCAAATGTCAAGTCTGAAGTTTCTAATGTTATGCTACAACCAGTTCAATGGATCAATTCCACCGGAATTTGGAAACATGACTCAACTGCAAGCGCTTGACCTTGCCTTCAACAATTTGAGTGGGTCTATACCACCAACCCTCGGAAAGTTAAACTCCCTCTTATGGTTGATGCTAGCAAACAATTCTTTAACTGGAGAAATCCCTCCAGAGTTGGGAAACTGTTCAAGCTTATTATGGCTAAACCTTGCCAACAATAAGCTCTCTGGAAAATTGCCTTCTGAACTGTCCAAAATTGGAAGGAATGCCACGACCACATTTGAATACAATAGGCGAAACTATAGAATGGTTGCTGGATCTGGTGAATGTTTGGCAATGAAGAGATGGATACCTGCAGATTACCCTCCATTCAGCTTTGTGTATGACCTCTTAACAAGGAAAAAATGTAGAGAACTTTGGGACAAATTGATCAAAGGGTACGGTGTTTTCCCGTTTTGCACACCTGGTAATTCCTCTCGCGTAACACAGATATCCGGGTATATTCAGCTAAGTTCGAACCAGCTCAGTGGTGAAATTCCTCCAGAGATTGGGTCAATGGTCAACTTCAGCATGATGCACTTGGGGCTCAACAATCTCTCTGGGAAGTTACCTCGAGAGATGGGAAGTGTATCCCTGGTGGTATTAAACATCACAAGAAACGAGTTTTCAGGCGAAATTCCCCAAGAAATTGGCAACATGAAATGTCTGATGAATCTGGATCTGTCGTACAACAATTTCTCGGGAATGTTTCCAACGAATTTGAACAAATTGACAGAGCTTAGCAAGTTCAACGTCTCATACAATCCCTTCATATCAGGTGAGGTCCCATCAAACGGACAGTTCGCAACCTTTTTAGAAGATTCATATTTAGGTAACCCCCATTTGATCCTACCCCGGTTTCTTCAGAACACTAGCAATGACAGAAACACCACCTCTCAGAAAGACCATAAAAAGTCCTCAAGACTACCTTTGCTTTTGGTGTGTGCGGTCATAACACTGGTTTTCATAGTATGCGGACTTCTCACTATATTAGTCTGCGTATCTGTGAAAGGCCCTTCAGAGGAACCAAGATACCTCTTGAGGGACACAAAACAGTGGCATGATTCCAGCAGCTCCGGATCCTCATCATGGATGTCCGACACAGTGAAGGTCATCCGTTTGAACAAGACAGTTTTCACACATGCCGACATTCTGAAAGCAACTGGCAGCTTCTCCGAGGACAGAATCATAGGAAAAGGAGGGTTTGGAACAGTGTACAAGGGAGTGTTTTCAGACGGTAGACAAGTGGCAGTGAAGAAGCTTCAAAGGGAAGGCCTGGAGGGTGAGAAGGAATTCAAAGCTGAAATGGAGGTTCTGAGTGGTCATGGCTTTGGTTGGCCTCATCCAAACCTGGTCACACTCTACGGCTGGTGCCTAAACGAGTCAGAAAAGATACTAATTTATGAGTACATAGAAGGTGGAAGCTTGGAGGATGTAGTGATGGACAGAACACGTTTGACATGGAGGAGGAGGCTAGAAGTGGCAATCGATGTGGCACGTGCACTAGTGTATCTACACCACGAGTGCTACCCTTCTGTTGTGCACAGAGATGTGAAGGCCAGCAATGTGTTACTAGATAAAGATGGGAAGGCGAAGGTAACTGATTTTGGGCTTGCCAGAGTGGTTGATGTTGGGGATAGCCATGTGAGCACTATGGTGGCTGGGACAGTGGGGTACGTTGCACCTGAATATGGACACACATGGCAGGCTACTACAAAAGGGGATGTGTACAGTTTTGGGGTTTTGATCATGGAGCTTGCAGCAGCAAGAAGAGCAGTGGATGGAGGGGAAGAGTGCTTGGTGGAATGGGCGAGGCGTGTTATGGGTTATGGACGACACCATCATCGTCATCATCACGGCTTGAGTCGGTCTGTGCCAGTTCTGCTGATGGGTTCTGGGCTTGTCGGTGGGGCTGAGGAGATGACTGAGTTACTGAGGATTGGAGTGATGTGCACAGCTGATGCACCACAGGCCAGACCGAACATGAAAGAGGTTCTTGCTATGCTGATTAAGATATTTAACCTCAAGGACCACTCCACTTATGGATACATTGTTTAG