Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_06754 LG1 98548801 98549984 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of cell division, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated
Cellular Component   located in   nucleus
Molecular Function   enables   DNA-binding transcription factor activity
SNP Position Effect Amino acid change
C/T 98548940 upstream_gene_variant
C/A 98549028 stop_gained p.Tyr44*
T/A 98549115 missense_variant p.His73Gln
T/C 98549175 upstream_gene_variant
G/A 98549202 upstream_gene_variant
T/A 98549213 upstream_gene_variant
C/A 98549242 splice_acceptor_variant&intron_variant
C/A 98549668 upstream_gene_variant
A/T 98549738 missense_variant p.Glu205Asp
C/T 98549804 synonymous_variant p.Asp227Asp
T/A 98549965 missense_variant p.Leu281His
C/A 98549966 synonymous_variant p.Leu281Leu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_06754.1
MIMDSHPLMSWSSYYQIEENPLPFTCQFSYSENSEVYPPPLQDLPIQEYHHDAVPLTEYYPSDPLYETLAIEPSPTLRADCDFYDISKGLPVWNEVNAVFDSEVDFLFRNKEESLKEMVDDRKVNEGREEITNPRNSRKLSRKTISEYFYMPITQAAREMNVGLTLLKKRCRELGIRRWPHRKLMSLQTLINNVQELLKEEGPESEEKLRFAIETLENEKKLLEEMPDIELEDNTKRLRQACFKANYKKRKLGQREPECSSWSGAMSEYNNESEEELDMKYLISQLA*


CDS Sequence:
>Vu_06754.1
ATGATCATGGACTCTCACCCTCTTATGAGTTGGAGCTCTTATTATCAGATAGAAGAAAACCCATTGCCATTTACGTGCCAGTTTTCTTACAGCGAAAACAGTGAAGTGTATCCTCCTCCACTACAAGATTTACCCATACAAGAATACCACCATGATGCTGTTCCTCTTACGGAGTATTACCCTTCTGATCCTTTATACGAAACGCTCGCCATCGAACCATCACCGACCCTGCGAGCAGACTGTGATTTTTATGATATATCTAAGGGGCTTCCTGTGTGGAACGAAGTGAATGCTGTGTTTGATTCGGAAGTCGATTTTTTATTTCGTAACAAGGAAGAAAGTTTGAAGGAGATGGTGGATGATAGAAAGGTTAACGAGGGGAGAGAAGAAATAACGAACCCTAGAAATAGCAGAAAGTTATCAAGGAAGACGATATCTGAGTACTTTTACATGCCAATAACACAAGCTGCCAGAGAAATGAATGTGGGGCTGACACTTTTGAAGAAAAGGTGCAGAGAGTTGGGTATCAGAAGGTGGCCCCACAGAAAGCTGATGAGCTTGCAAACTCTGATAAATAATGTACAGGAGCTGCTGAAAGAGGAGGGGCCGGAGAGTGAAGAGAAGTTAAGATTTGCCATTGAGACATTGGAAAATGAAAAGAAGCTTTTGGAGGAAATGCCAGACATTGAACTGGAAGACAATACAAAAAGACTTAGACAGGCATGTTTCAAGGCCAACTACAAGAAAAGGAAGCTAGGACAAAGGGAACCAGAGTGTTCTTCTTGGAGTGGCGCGATGTCAGAATATAATAACGAAAGTGAAGAAGAACTGGATATGAAGTATCTCATTTCTCAGTTAGCTTAA


Promoter Sequence:
>Vu_06754::LG1:98546801-98548801(+)
TTTTGTTTTTATCATTTTTTTTCCTTCACCAACTACACTAATCATTTTAAATGTAAAACATAAAAGAGATAGATACTATTTGACCAGTTTGCACTATCGTAATATTTCGTAAAGGAACAAATAAAAAAGAATAATACATGTATTTCTTAAACATATAAAAAATATTTAATATTTTTCATCAAATAAGCATGAAAAAAAATTATAAGATTGATATGAGTGAATAAAATAACAGTAATAAATTTATTTGATCGACCCTATAAAGTTGAACCCCTCTCTCTCTCACAAATAATACTTTCTTAAGATTTTTATCAGTTGACTATGTCAGTTTTTTTAATGCTAATCATAAACATTTTTCATTTATATAGATAAACTATTACAGTATGGTTTTTTTAAGAATTAGTTGAAATTTATTTAATAATGTAATCACTTCTAATAAATTCATCCATGAAATTAATATATAACGTGTTAATATTTAAAGACAGCTAAATACTAATTTGCATTTGCATTTAATTTCACGATAATTTGATATTGAAATATAATTTTAATTTGAGGAACTTTTTCTATCCACTTTTTTCGTGAAAAATATTATAGTAATAAATTAGTTTAATTAATTAACTATATAATAAATTTGATGTATTAAAATTCAAGCTTCTATTTAAGTTAGAATTTAAACATGCATAGTGAAAATATTTTTTACATGTCAATCAAACAATACTTGTGTTCGATACCATTGTCAAGATAATTAATATGAAAATAATTTTATTTACTGTATATGATAAATGTGGCTGAACGTAAAAAAAAATGTATTGTAAATTCGAAGTTTTTACACCTAAATATAAATATGATTAATTTATTTACAAATGATTAAAAACAAATAAACATGATACAATACAATTATCCATACAAATGGTTAACAGTGTTGTTATAAAACTATTGGCTATCACATGTAATTAAATACAAATATACATATATATAAAAAAAAGGAATTACATGAGCAGCAGCTATATATACAAGGGCAAAGAACTTCTCTTGGTAACAGTTGGGGAAAATAATTAGTGTTTTTTTTTCTGTCGGTTACACCTCCATGAATATGATAACTGGTGAGTTAAATTCGTTAGCCATCAGTTAGAAGTTAATTAAAACTGTAGAATAAATTAATGAATTAGGGCATTCAAAAGGTAAAAATAGATAAGCAGCCGTGTGTCATTAATTATCGCCCCCAAATCTAATATTATCAGTAATGATTATTGGTAGATGAAGTTGCAGAGAGGCAAATGATTATGATTATTGCTTCATAGTAATTTGTTAAACATTCAGGTATTTCCATTGCTTGGAAGAAAACGGGAAAACGTGCAGCATGCAACCATGAACGTGGCCCAATCAGCATCATATTGATGATTTAATTCAGCATCATATCAATTACTGCAAACTTAGCATGCCTAATCGCTCATTCCCAACCAAATTTTTGAAAGTGACTGCGAATTGATAATTGATAGAAACATTTTCTCAACTTGATTAAGTCTATGATAAAAAACACATCATGAAGCCACCATCTACTATATATAGCTATACTATACCCTCTATTCAGTATATCTTTTCAACTTCTGTATAGATTAAACTCTGGTAGAGAACAACCAATTCATGTATATTTGCTAAAACAGAAAAAAGAAGGCAAACAAATTAATTTTTCATCCGATCCAAAGGTTGAGATATTGAGCATTTAGAACCCTTGGATATTTCTACTGATAATTAAATTGATCTTGTAACTCTCACAAGCATACTCTTCACCATTAAAATGCATTCATGCACACAAGACGGCGCACATTCTCCAAGCAATTAATTGCTTCCATTTGTTACAAATGATACACTATCATCATCATTATCATCGTCATCAACGATGCAGTAAATTCATATCCATATTTCGTGTATGTATGTATATATATATATAGCCAACTTCCTTTCATATTCCCACACTGTTATATCCTTTGGTTACTTCACCA


Gene Sequence:
>Vu_06754(+)
ATGATCATGGACTCTCACCCTCTTATGAGTTGGAGCTCTTATTATCAGATAGAAGAAAACCCATTGCCATTTACGTGCCAGTTTTCTTACAGGTAAACCGTTCTCCTCTACGCCTTCCCACCATGACGAAATGTTAGTACGTTCGTTTAGGTTTTGAATTGTAATTATTGGAATGCCTTTTTCTCAGCGAAAACAGTGAAGTGTATCCTCCTCCACTACAAGATTTACCCATACAAGAATACCACCATGATGCTGTTCCTCTTACGGAGTATTACCCTTCTGATCCTTTATACGAAACGCTCGCCATCGAACCATCACCGACCCTGCGAGGTTATACACACGTCAACATCAAGAACATGAGTTTTCAAAGTCTTTATATTTTACGATGATGCTACTACTATGTTAGTTGTCCTTATTTAGATGTTGATTGTCTTGTTACAGCAGACTGTGATTTTTATGATATATCTAAGGGGCTTCCTGTGTGGAACGAAGTGAATGCTGTGTTTGATTCGGAAGTCGATTTTTTATTTCGTAACAAGGAAGAAAGTTTGAAGGAGATGGTGGATGATAGAAAGGTTAACGAGGGGAGAGAAGAAATAACGAACCCTAGAAATAGCAGAAAGTTATCAAGGAAGACGATATCTGAGTACTTTTACATGCCAATAACACAAGCTGCCAGAGAAATGAATGTGGGGCTGACACTTTTGAAGAAAAGGTGCAGAGAGTTGGGTATCAGAAGGTGGCCCCACAGAAAGCTGATGAGCTTGCAAACTCTGATAAATAATGTACAGGTACGTACGTTGTGTTTCTGATATGTACGTTGTGTTTGATTATTTACTACACTTTATTGTGATAAAATGAGGGTAGCTATTTCCTAATTTTGGGCAATGGGGTTTGAGGTGCAGGAGCTGCTGAAAGAGGAGGGGCCGGAGAGTGAAGAGAAGTTAAGATTTGCCATTGAGACATTGGAAAATGAAAAGAAGCTTTTGGAGGAAATGCCAGACATTGAACTGGAAGACAATACAAAAAGACTTAGACAGGCATGTTTCAAGGCCAACTACAAGAAAAGGAAGCTAGGACAAAGGGAACCAGAGTGTTCTTCTTGGAGTGGCGCGATGTCAGAATATAATAACGAAAGTGAAGAAGAACTGGATATGAAGTATCTCATTTCTCAGTTAGCTTAA