Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_06718 LG1 98191874 98193773 PREDICTED: homeobox-leucine zipper protein HAT5-like
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/A 98191949 3_prime_UTR_variant
C/A 98192326 missense_variant p.Asp270Tyr
A/G 98192327 synonymous_variant p.Pro269Pro
T/A 98192549 synonymous_variant p.Thr195Thr
G/A 98192571 missense_variant p.Ser188Leu
C/A 98192579 missense_variant p.Glu185Asp
G/A 98192647 intron_variant
A/T 98192736 intron_variant
G/A 98192794 intron_variant
T/A 98192798 intron_variant
C/T 98192834 intron_variant
A/T 98193120 synonymous_variant p.Pro80Pro
A/G 98193130 missense_variant p.Phe77Ser
C/T 98193135 synonymous_variant p.Glu75Glu
G/T 98193186 synonymous_variant p.Ser58Ser
G/T 98193512 5_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_06718.1
MAAGRAFSDITAFLRNQTALPTSQPLDSLFLSSSTAPFLGSRSMMSFEGEGGKGCNGSFFRAFDIDENGDECMDEYFHQPEKKRRLSANQVQFLEKSFEEENKLEPERKTKLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYEILHESYESLKANYEILLKEKDKLKSEVAHLSEKVLAREKEEGQSKQAESGTKRLQEQDQEPPQRPVLDSVSEGEGSKVSCVVGGCKQEDISSARSDILDSDSPHYTDGVHSAVLEHGDSSYVFEPDQSDMSQDEEDNLSKSLYPSYLFPKLEDADYSDPTESSCNFGFSEEDHALWNWEY*


CDS Sequence:
>Vu_06718.1
ATGGCGGCTGGAAGGGCTTTTTCCGACATCACTGCCTTCCTTCGCAACCAAACAGCTCTTCCCACTTCCCAACCTCTCGATTCTCTCTTCCTCTCTTCTTCCACTGCTCCTTTTCTCGGTTCGAGATCCATGATGAGCTTCGAAGGAGAAGGAGGGAAGGGGTGTAACGGTTCCTTCTTCCGCGCGTTTGATATAGACGAGAATGGAGATGAGTGCATGGACGAGTACTTTCATCAGCCTGAGAAGAAGCGCCGTCTCTCTGCCAATCAGGTTCAGTTTCTCGAGAAGAGCTTCGAGGAAGAGAACAAGCTTGAACCCGAGAGAAAAACCAAGTTAGCCAAAGACCTTGGTCTGCAGCCACGACAAGTCGCTATTTGGTTCCAGAACCGTCGTGCTCGCTGGAAGACCAAACAGCTCGAGAAGGACTACGAGATTCTGCATGAGAGCTATGAGAGTCTCAAGGCCAACTACGAAATCCTCCTCAAGGAGAAAGACAAGTTGAAATCTGAGGTGGCGCACCTGAGCGAGAAGGTGCTTGCAAGAGAGAAAGAAGAGGGGCAGTCGAAGCAGGCCGAAAGTGGAACAAAGAGGTTGCAGGAACAGGATCAGGAACCACCGCAAAGGCCTGTACTTGATTCAGTTTCGGAAGGTGAAGGATCCAAAGTGTCTTGTGTTGTTGGGGGTTGCAAACAGGAAGATATCAGCTCAGCCAGGAGTGACATTTTGGACTCCGACAGCCCGCATTACACGGATGGAGTACACTCGGCGGTGCTAGAGCACGGTGATTCTTCTTATGTGTTTGAGCCTGATCAATCGGACATGTCACAAGATGAAGAAGACAACCTCAGCAAGAGTCTGTACCCTTCCTACCTCTTTCCGAAACTCGAAGATGCGGATTACTCCGACCCAACGGAAAGTTCTTGTAATTTTGGATTCTCGGAGGAAGATCATGCTCTTTGGAACTGGGAGTACTAA


Promoter Sequence:
>Vu_06718::LG1:98193773-98195773(-)
AGATTACTGTAGCGTTTACCAGAAATAAATAATTCTTTACCATTCTTAACTGATAAAATTCCACCAATAAGAAACATACATGACTTCTTTATACTTTAAAGACAAACAAGCTCTTTAAAATGTAAATCTCACGAGCACGCTCCACTGATTATTAGTCCATCTAAAATAGGTAGCATATTCATGTACTTCATGTATTTTATGTATGATCCATGTATACTTAGAGACTTTAGACAGGTTTTGCTGGTTCTCCTCATCAGTAACAGTCACCTGGATTTCTTTTGCAGTCTCGATGTTTACTTCTCTCACAACCTCCTCTTGCATACCTTGTTTCCCTACCGATATTTTTTTAGCTGAACCTTTATTAGCAGGTTGAATTGGTGTCGTAATACTATTTACATATGTTGAACTCTCTCGAATACTTAGGTTTTGTTCACTTGAATGAATTTGGGGAGAGTAGTTGAGGGGATTTAAGATGATTTGAAGGTAAATCTTTTTGTTGTTTATTTGAGTGAACTTGGAAAATGAGAGTGGATTTGGAAGTAAATTTTTTTAATCTGTCACGTCAATCAAATCTACACTAATTATCACAAACTTTACTTTCAAATTCACTCTCACTTACCTTCAAATCCACTCAAATAAAGAACAAAAAAATTTACTTTCAAATCCTCTCAAATCCCCTCAATCACTCTCCTCTAAATCTATTCAAGTGAACAAGACCTTAAAGATGACCCAGTGACAATGAAGACACAAAATGTTATTGGTGTACTCTTTATCCCCCCAACCTGAGAGCCTCTTGAAGAGATGTTGATAACAGACATTTCATTACCTTTTGTACAAAAGGAATTGATTACCGAACGGTGAAAAGATGAACGAAAAATGGTGAAATTTATAGGACCACCTAACCTCTATTTATAGAAATTTCTCGAGGACACATGACACTTTTATAACCGTGAGATCTGACACCATCCAATGGAAAAGGGCGATGTGATGTTTCGCATTTGGCGTCAGACCTGATAGCAAACATATAAGGTGACATTACCGTCTATCGCCAACGATCAAATCTTTGACCCAACGATCACAATTTTAAACATAAATCGAACGAACACAACAATTAATGAGACATCGACACGATTCGCAAAGCAACCCAATCTTTCATCTCCAGTAATAGTATAAACAAATCCTCTTTGTTTGTTGACTTAAGTCCAAGCTAAGTCTTAAGAAGTTTGAATATTATATATCGACATGTAAATATTAATCAAATTACATCGACCGTACGTTCAAATTGAGATAAAACCAATTAATGCAAATTAGATCCAGTTAATCATCTAATTAAGTTAAATATGTTAGTAATCAGGTTTAACATAATTGGACTATAATTAATCTAAATCTTATAAAAAAATTCATAAAAAAAATTATAAATACATATTAAATATATAATTTTTAAGACTCTTATAACAAATTCATTACAACATTATTTATTAAACCGCTCTAATATCAAAGTAATTTAAATATCAAGATTTCTTTAAGAGATATTCAATGAATTGGATATATCCGAGAACAAAGAGAAAAAACACTGGACGTTACTTTATCCACCTGAAACATTTAGGTTTATTATTAAGTGGGAAGGGTAATTAAGGAGGAGGCTTTCCCAGATAAACTCACGTGTTCTCATCTACCCCATCCAGAGGGGAGACAAATATCGGAAGCAAAGGTTTGGTAGGAAAAACCATTTATACCATCTTCAATTTTTACTTTAATTAAGTTTCCCATATGCAAGTTTTGTTTTAACAAGCGAAGCCTTACAAAATTAATCTTTTTAATTTTTCATAACTTAAATTCGTAGTTTGAACATATATTATTTAAATTAAAAATAATTTATAATTTTAAGATCTATTGAGAAAAGTGTTGCAGTGAATTAGTGAGAGGACAAGATAGTAAGTCCACACTCTCTTTCCATCCAAGGCTCTTGTTATAAACCGCAGCAACACTCTTCTCTTCTC


Gene Sequence:
>Vu_06718(-)
AAAACGCCAAGGGAAACAAACATAGCCACCGCTTCTGTCTCTCTCTCTCTCTGTCTCTCTCTTTCTCTCTCTCCGTGTTCAGATTCTCTCTTCCGCTCTGCGTTGGAATTGGGTCTCTCTCGTCGTTGTTTGGTGTTCTGAGTGATGGGTATGCCCTGCCGCTGTTCCCACACCTCGCACATCACCGAAATCATCATCACCAGCTTCTTCCGCCATAAGTCTTAGATCCTCACCTCAATTATTTATAACTCCCTTAGTCACCTTCTTTCATGGCACCTTGAGATCCAACTTGGAGTAACCAACGCTTCCTCACATGGCGGCTGGAAGGGCTTTTTCCGACATCACTGCCTTCCTTCGCAACCAAACAGCTCTTCCCACTTCCCAACCTCTCGATTCTCTCTTCCTCTCTTCTTCCACTGCTCCTTTTCTCGGTCAGTCATAATTATTTATCACCCTCTCCCTCCTTAATTTTCACCACTGATCACGGTTTAACTAATGGGCGCTGTGTTTGACCTTTCTCTATTTGATTCAGGTTCGAGATCCATGATGAGCTTCGAAGGAGAAGGAGGGAAGGGGTGTAACGGTTCCTTCTTCCGCGCGTTTGATATAGACGAGAATGGAGATGAGTGCATGGACGAGTACTTTCATCAGCCTGAGAAGAAGCGCCGTCTCTCTGCCAATCAGGTTCAGTTTCTCGAGAAGAGCTTCGAGGAAGAGAACAAGCTTGAACCCGAGAGAAAAACCAAGTTAGCCAAAGACCTTGGTCTGCAGCCACGACAAGTCGCTATTTGGTTCCAGAACCGTCGTGCTCGCTGGAAGACCAAACAGCTCGAGAAGGACTACGAGATTCTGCATGAGAGCTATGAGAGTCTCAAGGCCAACTACGAAATCCTCCTCAAGGAGAAAGACAAGTTGAAATCTGAGGTAATCAAATCAAAAGTTAAATTTAGATCCAAAATGATTATCTTTCTATCAAAATCGAAGTTTGATCTTCATAACAAATGTTTAACAGAGCTAACACTTAAAGAAACAGCATATATAAGTTCTGTCCATGAATTATAATGTTCGTTTTATTCATGTATTGATACAATCCGGTGACTTTATTTTCTGGGCCGACGAGTTAATCCGTGTAACGTTTTGGTTAAATCAGGTGGCGCACCTGAGCGAGAAGGTGCTTGCAAGAGAGAAAGAAGAGGGGCAGTCGAAGCAGGCCGAAAGTGGAACAAAGAGGTTGCAGGAACAGGATCAGGAACCACCGCAAAGGCCTGTACTTGATTCAGTTTCGGAAGGTGAAGGATCCAAAGTGTCTTGTGTTGTTGGGGGTTGCAAACAGGAAGATATCAGCTCAGCCAGGAGTGACATTTTGGACTCCGACAGCCCGCATTACACGGATGGAGTACACTCGGCGGTGCTAGAGCACGGTGATTCTTCTTATGTGTTTGAGCCTGATCAATCGGACATGTCACAAGATGAAGAAGACAACCTCAGCAAGAGTCTGTACCCTTCCTACCTCTTTCCGAAACTCGAAGATGCGGATTACTCCGACCCAACGGAAAGTTCTTGTAATTTTGGATTCTCGGAGGAAGATCATGCTCTTTGGAACTGGGAGTACTAAGTTTTCTATAATGTTTGTGTGTCTGTGCCGTGTGTAGTGTTTATTTATTTAGTATTTGCAGTTTTAGTGGAGAATTTATAAATGGGAAATAAGTCAGATGAATGACTATAGGTTTATTAGGATAGAGATGGTGGTTTTTGCCGCATTTTGCTACTTGTAATGAAAGTGTTGGTTCCAATGTAATTAAATAATGCGTTCCAGTTGAGAATGTAATTGTGGATTTAGTTTAATGAAGAAATATAAATTGGAAAGATGAAGAAATGAAAAGATAGTTGAATTAGTTCG