Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_06589 LG1 96752489 96754820 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   pollen development, pollen development, microgametogenesis, microgametogenesis
Cellular Component   located in   cytosol, chloroplast
Molecular Function   enables   molecular_function
SNP Position Effect Amino acid change
T/C 96752539 stop_lost p.Ter521Trpext*?
A/T 96752546 missense_variant p.Leu519Gln
C/A 96752706 missense_variant p.Val466Leu
C/T 96752726 missense_variant p.Cys459Tyr
A/T,* 96752735 missense_variant p.Leu456Gln
T/A 96753226 intron_variant
G/T 96753254 intron_variant
G/A 96753274 intron_variant
T/C 96753343 intron_variant
G/T 96753918 intron_variant
C/T 96754131 synonymous_variant p.Lys230Lys
T/C 96754354 missense_variant p.Glu156Gly
T/A 96754358 stop_gained p.Lys155*
G/T 96754690 missense_variant p.Ala44Asp
C/T,* 96754697 missense_variant p.Asp42Asn
T/C,* 96754703 missense_variant p.Thr40Ala
A/G 96754731 synonymous_variant p.Pro30Pro

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_06589.1
MQATMDPHPGTFPVLSYVMSRLPSFGPRSPASISASSASTSDSASASASTSRSHHVDIEQPPHSDASSSSIVGQMPNLANPEMLASMTRAISDVAQARSVFKVMGPRPTHEEVDEAKAKLADLEAHLSRQLEEIVGLPRPPEIDEARWTAHIAEKEKVIKESTEKEKRILKSIIQLDNMHDAYGKLLKDAEKRLVKIYENDGADYDNNNENEEDDEDSVQVKEQVEGILKEAYGKGVERIALSGKRLKYLPEAFGHIPALVVLDVSTNQLSVIPDSICGLESLEELNLSSNALESLPESIGLLQKLKVLNVSGNKLSALPDSISKCSSLVELDASFNSLSYLPTNIGFELHNLQKLMIQLNKIRSLPSSICEMKSLRYLDAHFNELRGLPVAIGKLTNLQVLNLSSNFSDLRELPETFGDLINLRELDLSNNQIHALPDSFGRLHNLTKLNLEQNPVEVPPMHVVGEGLQAIKGFMSQRWIDILEEEERKTTQEVQEQGENGWLTRSTSWLKNVSENVTEMIMSPKTPKEAYLNQQL*


CDS Sequence:
>Vu_06589.1
ATGCAAGCCACCATGGATCCCCACCCAGGAACCTTCCCCGTTCTCTCCTACGTCATGTCTCGTCTCCCTTCCTTCGGCCCCAGAAGCCCTGCCTCCATCTCCGCCTCCTCCGCCTCCACCTCCGACTCCGCCTCCGCCTCCGCCTCCACTTCCCGTTCCCATCACGTCGACATCGAACAGCCACCTCACTCCGATGCTTCCTCTTCCTCCATCGTGGGCCAAATGCCCAATCTAGCCAACCCGGAAATGCTGGCCTCCATGACCCGCGCCATCTCCGACGTTGCCCAGGCTCGATCCGTCTTCAAGGTCATGGGGCCCCGGCCCACCCACGAGGAGGTCGACGAGGCCAAGGCTAAGCTAGCGGACCTGGAAGCCCACCTGTCCCGCCAACTGGAAGAGATCGTGGGCCTGCCCAGGCCCCCGGAGATCGACGAGGCCCGCTGGACTGCCCACATCGCGGAGAAGGAGAAGGTCATCAAGGAATCCACGGAGAAAGAGAAGCGCATTTTGAAGTCCATCATTCAGCTCGACAACATGCACGACGCCTACGGTAAGCTCCTCAAGGACGCCGAGAAGCGCTTGGTCAAGATTTACGAGAACGACGGCGCCGACTACGACAACAACAACGAAAACGAAGAGGACGACGAGGACAGTGTTCAAGTGAAAGAACAGGTTGAGGGGATTTTGAAGGAGGCCTACGGAAAAGGGGTGGAGCGAATCGCTCTCTCCGGCAAGCGCCTCAAGTACCTGCCTGAAGCATTTGGCCACATTCCTGCATTGGTCGTCCTCGATGTCTCCACCAATCAACTTTCGGTGATTCCTGATTCCATATGTGGATTGGAAAGTCTCGAGGAGCTTAATCTCTCTTCCAATGCTTTGGAGTCGCTACCCGAGTCAATTGGCTTGTTGCAGAAGCTGAAGGTCCTCAATGTGTCCGGAAACAAGCTGTCTGCTCTTCCTGATTCCATTAGTAAGTGCAGTTCATTGGTGGAGCTAGATGCAAGCTTTAACAGCCTGTCGTATTTGCCAACAAACATTGGATTTGAGTTGCATAATTTACAGAAGCTTATGATTCAGTTGAACAAGATTCGATCTCTTCCCTCGTCAATTTGTGAGATGAAATCCCTGCGTTATCTGGATGCTCACTTCAACGAGCTGCGCGGGCTTCCTGTTGCGATTGGGAAATTGACTAATCTTCAAGTTCTAAACCTGAGCAGTAACTTCAGTGACCTCAGAGAACTTCCAGAGACGTTTGGTGATTTGATCAACCTCAGGGAGTTAGATCTGAGCAACAACCAAATTCATGCACTTCCTGATTCTTTTGGTCGCCTTCATAACTTGACCAAGCTAAACTTGGAACAGAATCCTGTCGAAGTGCCACCTATGCATGTTGTGGGTGAAGGGCTCCAAGCCATAAAAGGGTTCATGTCTCAGAGATGGATTGATATATTGGAGGAGGAAGAAAGGAAAACCACCCAGGAGGTGCAAGAACAAGGAGAAAATGGGTGGTTAACGCGAAGCACCTCTTGGCTGAAGAATGTTTCTGAAAATGTAACTGAGATGATTATGTCCCCAAAAACTCCCAAAGAAGCGTATCTTAATCAGCAGCTATGA


Promoter Sequence:
>Vu_06589::LG1:96754820-96756820(-)
TCTACAAGTTCTTTAAAACAATTTACTATACGATACGATTATTTTATTGAGTAAAAGTAATTTTTCATCTCTCCTAATTTGATGTAAAAAATGCCTATTAAATCTTTCTAGTTGATACTACTTTTATTCATATCAGTTTTGTATATTGCATTGCACTAGATGTATTATAACATATATTAATATGAAATTTTGATTAAGTATATTTAAATTAAAGTAATAATGCTATTAATATGATTTAAAGTAATAGTAACAATAAAAAAATTCATGTTTATTAAAACAATAAAATGAAGTACCATTGACTACTTTTGTAGAATGATTTGACATATGAAATGTATTCATTTTTTACATTTTTTAATATGTTAAAGAAAATGAGTAACATGTTTGAAAAAAACCATTACACATTATTTGTAATGGAACCTTTTAAATAAATATATAAATGTCATTGTAAAATGATAGTTTGAACACTTATTTTATTTCAGCTTTTATCGTGGTATAATTGTGACTAAGAATAATTTTGAACAACTTTTAAACATTGATGAAGTTTATGAAACTTAGTTTCCTGTAATATAGATATATAAAGTTAGGTTGAGTAAAAACATATACCGACTGAATAAATAAATTACAAATACAATAATGAGTTATTAAAAGTTATAGAGTATTGTCCAAAACATTTTCAAAGATTTCAAAATGTAGATAATGCAGTTAATTATACTTCATACATATTCATACTCGTCTAAGATGAGTATTTTTAGTCTCTTTTTTGTCTTGATTCTAGAAATGACAACTAATAATTTACTATGAGTAAAAACATAACGTGAAAGATACAATTCAACTTTTGAAAGAGAATATTGACTTAACTCTTATTGATTGTGATGACAAAACATAAGATATTTAAAATTATTTTCTTTAAAATTTGAAAGGAAGTATTGAGTTAGGAGGAACCAATTCCATTATTGGATAAATATCTTTCCACTAATGTTTTTACCCATGATATAGGGACATAAATAACATTTTTTTTAAATCATTAACTTGTAACTTTATGTCATCACAAAACCATTGCCTTGATCAAATTTTTTTAAAAACATAATAGGTAGAATATAACTTAAATAATTTGCTTATATTGAAACGTAAACTATTACTTGTTCAAACCCTATCAATTATCACTGTCGTAGAAAGACGTATGCTTTTTGTAAATCAAAACATAGAAAATTACTTATTCATGAGATCTATCAATTGACATTACAAAATTTATAAGTTTTGTAAATACTCCAAAACTTTAAACTAGTGACATTTTCAACAATTTAAAAATAATTGCTAAATTTTAGTACGACATGAATATATAAGTAATGTAAATAAACACACAAGACTGAAATATGACAACGACGGAAATATACTTGAATTGTTTATCCATCACGGAAATATACTTTTTCCGGAAATTGGAAAATTATTAAAATCATTAAAAATGAAAAAAAAAACAAATATTTATAAACGAAGAAAAACTCTGATCTCCTGATCCTTTTTCCGTGATCCTCAAAAACAATTCGGTCATCTCCTTTCGATCCATCGACAACACAAAAAAAAAGTTGGAGATATTGTTTGGCTAGAGGGAAATAAGAATAAAGAAGGTGCAGATTAGTTGTTTTGATGAATGAAAATAAATAATATAAAAATTAGTCTATACAAATTAAATTATGTATTTTTTTTTTCTTTAAGTAAAACTATTTATTATTTTAAAATATTTGTTTAAAATAAATAATTTCTCTCTGGTTTGACTTCACTTTAGAAGACAAAATTTTCTTTCGATAAGTTCTCCAAAAATAGGTTATCTTCTTTTTGTTGTACAGGAATTTGAGCAAAAGAAAGAGGGAGTGATTTTGTCCCACACATTCAAAGAAAATAACTAACTAACTGCCTGAATCCCAGGTATGGAGGTTGATCTATATAGCGAAGCCTTATCACATTGATACACATTTTGGTTTGTGAGTTGCTCCCTCCCTCCA


Gene Sequence:
>Vu_06589(-)
ATGCAAGCCACCATGGATCCCCACCCAGGAACCTTCCCCGTTCTCTCCTACGTCATGTCTCGTCTCCCTTCCTTCGGCCCCAGAAGCCCTGCCTCCATCTCCGCCTCCTCCGCCTCCACCTCCGACTCCGCCTCCGCCTCCGCCTCCACTTCCCGTTCCCATCACGTCGACATCGAACAGCCACCTCACTCCGATGCTTCCTCTTCCTCCATCGTGGGCCAAATGCCCAATCTAGCCAACCCGGAAATGCTGGCCTCCATGACCCGCGCCATCTCCGACGTTGCCCAGGCTCGATCCGTCTTCAAGGTCATGGGGCCCCGGCCCACCCACGAGGAGGTCGACGAGGCCAAGGCTAAGCTAGCGGACCTGGAAGCCCACCTGTCCCGCCAACTGGAAGAGATCGTGGGCCTGCCCAGGCCCCCGGAGATCGACGAGGCCCGCTGGACTGCCCACATCGCGGAGAAGGAGAAGGTCATCAAGGAATCCACGGAGAAAGAGAAGCGCATTTTGAAGTCCATCATTCAGCTCGACAACATGCACGACGCCTACGGTAAGCTCCTCAAGGACGCCGAGAAGCGCTTGGTCAAGATTTACGAGAACGACGGCGCCGACTACGACAACAACAACGAAAACGAAGAGGACGACGAGGACAGTGTTCAAGTGAAAGAACAGGTTGAGGGGATTTTGAAGGAGGCCTACGGAAAAGGGGTGGAGCGAATCGCTCTCTCCGGCAAGCGCCTCAAGTACCTGCCTGAAGCATTTGGCCACATTCCTGCATTGGTCGTCCTCGATGTCTCCACCAATCAACTTTCGGTAATTCCGCCGCTTTTTTTTTTCGAATTTGGATTCTCAGCTGGATTTTTATGTGTTGTTCATCTGCACCAAAAACCAGCAAAGAATCTCAACTCATTTTTTCCGCATCCCTTTCGAATTCTTTATCTCCTCATAAATCCACACTCCTCCTTGTTTACTTAGCTTCTACTCTTTCTTCTATATTTTGATTTCACGCACACATATATGTACGTGTTCCACAATTCTTTGCTGCACAATAGGTGATTCCTGATTCCATATGTGGATTGGAAAGTCTCGAGGAGCTTAATCTCTCTTCCAATGCTTTGGAGTCGCTACCCGAGTCAATTGGCTTGTTGCAGAAGCTGAAGGTCCTCAATGTGTCCGGAAACAAGCTGTCTGCTCTTCCTGATTCCATTAGTAAGTGCAGGTAATGCAAGAAAGAATTCCATTTTACATTCTTTTTGTACGCTATATCGACTAACGTAACTAGTACAAATACGTATGTCTGTGATTGAACGATGTAGAAGTTTTTTACATTCTCGGTGTGTGCACTGTTTACTCTTGTTTCCGGTGTGTCAAGTTGGTTAATAACTCTGGTTTAGTTTGACTTCCTTGCAAAATTTATGTCCGACATCATGGCAACTCTCAAGTGATGACGGTATATTTTGAAAGCTATACTTGTTACACATGCAACATATCAAGGGCAAAACTGTTTCTGGTTTAAATTCTTGGATATTAAGGAAAGTCTGAACATCGTTTGTGGCTAAATTATATCAGTTATGCATCTTGTCAATTTGTAAACATCATATCTGAGTTTGGAACCGTATTTTTTGTTTATGCACATGCGTCGATACTTAGAATGCTTTTTCTATGATTGATGGAACCATCTTTATATTAAATGATCAGTTCATTGGTGGAGCTAGATGCAAGCTTTAACAGCCTGTCGTATTTGCCAACAAACATTGGATTTGAGTTGCATAATTTACAGAAGCTTATGATTCAGTTGAACAAGATTCGATCTCTTCCCTCGTCAATTTGTGAGATGAAATCCCTGCGTTATCTGGATGCTCACTTCAACGAGCTGCGCGGGCTTCCTGTTGCGATTGGGAAATTGACTAATCTTCAAGTTCTAAACCTGAGCAGTAACTTCAGTGACCTCAGAGAACTTCCAGAGACGTTTGGTGATTTGATCAACCTCAGGGAGTTAGATCTGAGCAACAACCAAATTCATGCACTTCCTGATTCTTTTGGTCGCCTTCATAACTTGACCAAGCTAAACTTGGAACAGAATCCTGTCGAAGTGCCACCTATGCATGTTGTGGGTGAAGGGCTCCAAGCCATAAAAGGGTTCATGTCTCAGAGATGGATTGATATATTGGAGGAGGAAGAAAGGAAAACCACCCAGGAGGTGCAAGAACAAGGAGAAAATGGGTGGTTAACGCGAAGCACCTCTTGGCTGAAGAATGTTTCTGAAAATGTAACTGAGATGATTATGTCCCCAAAAACTCCCAAAGAAGCGTATCTTAATCAGCAGCTATGA