Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_06439 LG1 95134364 95137474 PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g34110
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   monocarboxylic acid metabolic process, protein phosphorylation, protein phosphorylation, protein phosphorylation, plant-type cell wall organization, plant-type cell wall organization, protein phosphorylation, monocarboxylic acid metabolic process, shoot system morphogenesis, plant-type cell wall organization or biogenesis, protein phosphorylation, protein phosphorylation, shoot system morphogenesis
Cellular Component   is active in   plasma membrane
Cellular Component   located in   plasma membrane, plasma membrane
Molecular Function   enables   ATP binding, protein kinase activity, protein kinase activity, protein kinase activity, ATP binding, protein binding
SNP Position Effect Amino acid change
A/G 95134387 3_prime_UTR_variant
G/A 95134760 missense_variant p.Thr598Ile
A/T 95134847 missense_variant p.Val569Asp
C/A 95134857 stop_gained p.Glu566*
T/A 95134999 splice_region_variant&intron_variant
G/C 95135637 synonymous_variant p.Arg333Arg
C/T 95135657 missense_variant p.Val327Met
T/C 95135811 missense_variant p.Ile275Met
C/T 95135912 missense_variant p.Asp242Asn
A/G 95135971 intron_variant
A/C 95136605 upstream_gene_variant
A/C 95136606 upstream_gene_variant
T/C 95136607 upstream_gene_variant
A/T 95136610 upstream_gene_variant
G/A 95137147 synonymous_variant p.Leu7Leu
G/T 95137459 5_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_06439.1
MSFLHFLLLCVLVAFSSSHLVRGNAELRALMDLKISLDPEDTVLASWTSDGDPCSGSFLGVACNEHNKVANISLPGRGLSGRVSPAVAELRCLSGLYLHFNHLSGDIPREIANLTELMDLYLNVNNLSGTIPPDIGNMISLQVLQLGYNQLEGNIPKELGSLKQLNAMSLQHNRLTGQIPLTLGSLENLRKLYLSSNNFNGIIPATLADIANLEVLDIQNNSLSGTVPSALRRLGEGFKGADNPDLCAVGFSTLKTCNNDTIYGVGQISSGNISINNNPSITFSNPANTHLNCSQIHCSKSRRFLHLVIAASVTTTIITFLSSGIFVFVRYRRHRQRVRNTSDCSESQPSPNLAKDFYRSSSPLVNLENYYNGWDSVADGQNASGLSLEYLNRFRFNIDEIESATQHLSEANLLGKSKLSAVYKGVHRDGSLVAIRSISATCCKTEEDEFLKGLILLTTLRHENIVKMKGFCYSRSRGEWYFVYDFATRGNLSQYLDKEDGSDSVLEWSKRVSIIRGIAKGIGYLHSDEASKPTIVHQNVSVEKVILDHEFNPLIMDAGLPKLLAEDVVFSALKASAAMGYLAPEYITTGRFTEKSDTYAFGVIVLQVLSGKALVGGSIRVAVEAFRFEDFVDTNLKGNYSKSEAAILSKLAIMCTNEVPEQRPTMVEVIQELAMLPLHPS*


CDS Sequence:
>Vu_06439.1
ATGAGTTTCCTTCATTTCCTCCTTCTGTGTGTGTTGGTTGCATTTTCCAGTTCACACCTGGTTCGTGGAAATGCAGAGCTAAGAGCTCTGATGGACCTGAAAATATCTCTGGACCCAGAGGACACGGTGCTTGCCTCGTGGACCAGTGATGGTGATCCGTGCAGTGGTTCGTTCTTGGGGGTTGCGTGCAACGAGCATAACAAAGTGGCGAATATATCATTGCCAGGAAGAGGTCTTTCTGGCCGTGTCTCTCCAGCTGTGGCTGAACTCAGATGCTTGTCAGGTCTATACCTACATTTCAACCACCTCTCTGGGGACATACCCAGAGAGATTGCAAATCTAACAGAATTGATGGATCTCTATCTCAACGTTAATAATCTATCTGGAACAATTCCCCCTGATATCGGGAACATGATTAGTCTCCAAGTGCTGCAGTTAGGCTATAACCAGTTAGAGGGGAACATACCCAAGGAACTGGGTTCGTTGAAGCAGCTTAATGCTATGTCTTTGCAACATAACAGATTAACTGGTCAGATTCCTCTAACCTTGGGTAGCTTGGAGAACCTAAGGAAGCTATATTTGAGCTCTAACAACTTCAATGGCATAATCCCTGCAACACTAGCTGATATTGCAAACTTGGAAGTTCTAGATATTCAAAACAATTCTCTTTCAGGGACAGTTCCTTCTGCATTGCGGAGATTAGGGGAAGGATTCAAAGGTGCAGACAACCCAGATCTCTGCGCAGTTGGGTTTTCTACTTTGAAAACTTGCAACAATGATACAATATATGGCGTTGGTCAGATTAGTTCCGGAAATATATCCATAAATAATAATCCCTCGATAACTTTCTCGAATCCTGCAAATACCCACTTGAACTGTAGCCAAATTCATTGCTCAAAATCAAGAAGGTTTCTCCATCTTGTCATTGCAGCAAGTGTGACAACTACCATTATAACATTCTTAAGTTCTGGAATTTTCGTGTTTGTCAGATACCGTCGCCATAGGCAGAGGGTTAGGAACACGTCAGATTGTTCTGAAAGCCAACCTAGTCCTAACCTGGCCAAAGATTTCTACAGAAGTTCATCACCACTTGTTAATCTTGAGAATTACTATAATGGTTGGGACTCAGTGGCCGATGGTCAAAATGCAAGTGGATTATCCCTTGAATATCTGAACCGTTTTAGATTTAATATAGATGAGATAGAATCCGCAACACAACACCTTTCCGAGGCCAATCTACTGGGTAAGAGCAAACTCTCAGCAGTCTATAAAGGTGTTCATAGAGACGGTTCTCTTGTGGCCATTAGAAGCATCAGCGCGACTTGCTGCAAAACTGAAGAAGATGAATTTTTGAAGGGGTTGATCCTATTAACCACTCTGAGACATGAAAATATTGTTAAGATGAAAGGTTTCTGTTACTCAAGGAGCAGAGGTGAATGGTATTTTGTCTATGACTTTGCCACCAGGGGCAATCTGTCTCAATATCTTGACAAGGAAGATGGAAGTGACAGTGTACTAGAATGGTCGAAAAGGGTTTCTATCATCAGGGGTATTGCAAAAGGTATTGGTTATTTGCACAGCGACGAAGCAAGCAAGCCTACAATAGTACACCAAAACGTTTCAGTTGAAAAGGTTATTCTAGACCATGAATTTAACCCCTTGATCATGGATGCTGGCCTCCCTAAGCTTCTTGCAGAGGATGTAGTTTTCTCAGCTCTTAAAGCAAGTGCTGCCATGGGATACCTTGCACCAGAATATATTACAACTGGGCGATTTACGGAGAAGAGTGACACATATGCTTTTGGGGTCATTGTCCTTCAAGTTCTATCTGGAAAGGCATTGGTGGGGGGTTCAATCCGGGTTGCAGTTGAAGCTTTTAGATTTGAAGATTTTGTTGACACAAATCTGAAGGGAAATTATTCTAAATCTGAAGCTGCAATTCTTTCAAAGCTTGCAATTATGTGCACCAATGAAGTGCCAGAGCAAAGGCCAACCATGGTGGAGGTGATTCAAGAGCTGGCCATGCTTCCTCTCCATCCTTCATAA


Promoter Sequence:
>Vu_06439::LG1:95137474-95139474(-)
TATACAATCACACTTATCTTTAATCGAACAAAGATTGCTCATTGATCCCAAAAACACACATATAATCTAATTATCCCCATGTAAATCAAAACCCTAAGTGACTCTAAAAGAACTGTAAGAAAAACTTATTCTTTTCATAAATTGATTGGATATACAAGACATTATAAATTATTTACTAATTAATAATATAAATTAAAAAATTACAACTAATTCGGTTCTTTGTGTAAAATAAACTGTTTCAATAAATTCATTATAACTCTTATATTGCTATGTTTTAGGAGATATAAATATAATCTTAAATTAGGCAGTCATAGCAGTGGTTAACAACATTTAAAAAATATTAATAATATTGTATCTGTTGAATTGTTAGAGTCCTCAAGATTTTTTATAATATAAAAAAAAACATAAGAATGTTTTGTAATAATATTTATTATCATTATTAAAAAAAAACAACTACCTCAACAGATTAGAACTTATTTCTACTCATAATTCAGAAATAATTTACCTCTTACAAAAAGATCTCAATTGTTTCATGTTCATATCTAAGGTTGCAGTGAAACGACCATCCACTGATATTGGTTATAACAATAAAAACTCTTTTTAAACAATAAAATAATTTGAATAAAAAAATGTCAGCACTCGAACCTCTGAAGAAAATAAAAATCTGAATTTTATCATAGTTTTGTATATGTTTCCTTTTCCCAATCATATCGAGAATGGTGGCAGAGATTGAGTGGCGACATGATTTTTAACTTCGATGTAGTCTTGACTTAACGACAACTAAAGTCTCTTTCACCACAAACAAACAAAAACAAAATGGAAAGACCGCCATCACTACTTTTTTTTTCTTTCCACTGCCAAATAAACAACCTTATTTATTCATGCTAATGCCCAAATGCCAAATGGTGTTTGGTAAAGTGGAGAGCATTGAAAAGGATCATCACTACCTTCCTTTTTCCACTTCAAAAAATTTTATCATCCCAAACTATACCTTTTTAAAGCCATAATTTAAGCCATCCACACGTTTGTCCTTTTTCACATTGTACCATAGGATATCTGAATTCACCAACTGTCGACGAGTATCACGGACGACAGAGTGTCGACCCATCTCACAATCGCAGGAGTATCGAACACTCCTTAACGCCAATCATTTGTGAGGTCGACACTCATTTTGTTGATGTCGACGTACTGGCAGACCACAAGCCATCGACGATGTCGCGACATCTATCGCTCTCACGACATTTCATATGTTTGTGTCGACGCAAACAGTGGTCGACATATAGTGAACGATATCATAATAAACGGTTCAGCAGTTAAGAATAAGCAGTTACAAATATTAGCTAACGCAACGCCACGAATCACGCAAGTAATTGACTCAGTATCAGACACGACCTAGCAGTTACAACTTCCAAATAGTCCAAAGGTACGTTTTTCCCCTTAGAGAAATTAAGAAAGAGAAATTATTCTTCTTCTTGAACCAAAAGATTGAGGTGACCCCTTTTCTGACTTGAGCGTCGGAATGCCTTTGCAGGTACCCAGCCCACTTTCCCATCAGAGAGGATAAGGAAGAGAGATATCACGGTAACAGCATCGCAGGAAGGAGCAGTGGAGATTTGTTAAGTTCGTATCTCGGTTTCACATTCATACAGAAACACACACTATTTTTTCTAACCATCATATTCATTCAAACGTTAAAACTAATGCAATGTTTCTTCCTTAGTATTAGAATTGATATCATCACAATTCAAACTGGTTTTGAACACACATCATCCTTATCCTTCCCTTGCCGTATGGGTTCGGGGTCGGTGATGCTTTTTCAAACATCATCCTTATGTTTCTCTTGCGCAATAATAAGGGAATTCATTTATAGCATTACTTTTCAATTTTTATGGCCAAATGGGAAAGTTGAAAAAACACAACACAGTCAAACTGAGGTGGTCCACAATACCAAAATCATTCATTGCGGCTTTAATATTATTCTACAGAAAAACGCTTTCTAT


Gene Sequence:
>Vu_06439(-)
ACAGTGGCAACCATCCTTGCTGACCTTCATTCTCTATTGGAATTGTAATGTGAACCGATCTGTCTGTCAGCAACTCGAAGTTAATTAATTTGCTATGTTCTCTCTTTCAAGACGCTTCGTTTCTCTATGCACAAGCACAAACTAAACCTCCACATTCAGTGTCTTAGATGAAGTCTCCAAAACAAAGACTAACCGGGTGACTGTTGACCAACAACCCCAAACCAAAGCTAAAACCTTTGAGACAAAAGCTCATATGGGTGTCTCTCTTTCTGTTTAGTTTTGGAGAATTTTCAGTCCAGAATTGGAAATGAGTTTCCTTCATTTCCTCCTTCTGTGTGTGTTGGTTGCATTTTCCAGTTCACACCTGGTTCGTGGAAATGCAGAGCTAAGAGCTCTGATGGACCTGAAAATATCTCTGGACCCAGAGGACACGGTGCTTGCCTCGTGGACCAGTGATGGTGATCCGTGCAGTGGTTCGTTCTTGGGGGTTGCGTGCAACGAGCATAACAAAGTGGCGAATATATCATTGCCAGGAAGAGGTCTTTCTGGCCGTGTCTCTCCAGCTGTGGCTGAACTCAGATGCTTGTCAGGTCTATACCTACATTTCAACCACCTCTCTGGGGACATACCCAGAGAGATTGCAAATCTAACAGAATTGATGGATCTCTATCTCAACGTTAATAATCTATCTGGAACAATTCCCCCTGATATCGGGAACATGATTAGTCTCCAAGGTTAGTATATAGTTTTGTGGTAGCTTATCTTTAGTTTGTATCAAGTTATCTACAGAAACGAAGCCTCATTGCTTAATCTTAAATTCTATTAACTGCTTTGAGTTGAATACCTTTAATGGGGGAAGGAAATTGTATTAGTTTGAATTTTGCGAATTATCTGAAAACTCTGTCAGTTAAGTTGCGTTACTACTATTATGATATGGATTTGACTAAGTCCAGCTTCCAAGTTGGGTGTCCAGAACTGTAAATGTACTTCTCCATTCCATGCTTATCTGTTAGTATGCATTATTCATTTCCATTTTGTTAAAAATGAATGATACTGAATGAATCCAATTAATCCCTTTTAATTGATTTTCAACAAGCCTACCTGTATTTGGTATCAAATTTGAGGGGTTTTTGTTAGAGTTTTGTATATTAATCCAAATTCTCCTGCTCTTCATACTTTAGTGCTGCAGTTAGGCTATAACCAGTTAGAGGGGAACATACCCAAGGAACTGGGTTCGTTGAAGCAGCTTAATGCTATGTCTTTGCAACATAACAGATTAACTGGTCAGATTCCTCTAACCTTGGGTAGCTTGGAGAACCTAAGGAAGCTATATTTGAGCTCTAACAACTTCAATGGCATAATCCCTGCAACACTAGCTGATATTGCAAACTTGGAAGTTCTAGATATTCAAAACAATTCTCTTTCAGGGACAGTTCCTTCTGGTATGCCATTATTCTTATTTTATTGTTGACCTATTTTTTATACATTTGGACATATACTGATTAGTACTTTAAAATGAAAATGAAGCATTGCGGAGATTAGGGGAAGGATTCAAAGGTGCAGACAACCCAGATCTCTGCGCAGTTGGGTTTTCTACTTTGAAAACTTGCAACAATGATACAATATATGGCGTTGGTCAGATTAGTTCCGGAAATATATCCATAAATAATAATCCCTCGATAACTTTCTCGAATCCTGCAAATACCCACTTGAACTGTAGCCAAATTCATTGCTCAAAATCAAGAAGGTTTCTCCATCTTGTCATTGCAGCAAGTGTGACAACTACCATTATAACATTCTTAAGTTCTGGAATTTTCGTGTTTGTCAGATACCGTCGCCATAGGCAGAGGGTTAGGAACACGTCAGATTGTTCTGAAAGCCAACCTAGTCCTAACCTGGCCAAAGATTTCTACAGAAGTTCATCACCACTTGTTAATCTTGAGAATTACTATAATGGTTGGGACTCAGTGGCCGATGGTCAAAATGCAAGTGGATTATCCCTTGAATATCTGAACCGTTTTAGATTTAATATAGATGAGATAGAATCCGCAACACAACACCTTTCCGAGGCCAATCTACTGGGTAAGAGCAAACTCTCAGCAGTCTATAAAGGTGTTCATAGAGACGGTTCTCTTGTGGCCATTAGAAGCATCAGCGCGACTTGCTGCAAAACTGAAGAAGATGAATTTTTGAAGGGGTTGATCCTATTAACCACTCTGAGACATGAAAATATTGTTAAGATGAAAGGTTTCTGTTACTCAAGGAGCAGAGGTGAATGGTATTTTGTCTATGACTTTGCCACCAGGGGCAATCTGTCTCAATATCTTGACAAGGAAGATGGAAGTGACAGTGTACTAGAATGGTCGAAAAGGGTTTCTATCATCAGGGGTATTGCAAAAGGTTAGTTCTTCTCCTTTCTCCCGTTTCTGCATCAGATGCAACTCTGGATATCTGTTTGATATTGACTTTTCTTTCACGACCAGGTATTGGTTATTTGCACAGCGACGAAGCAAGCAAGCCTACAATAGTACACCAAAACGTTTCAGTTGAAAAGGTTATTCTAGACCATGAATTTAACCCCTTGATCATGGATGCTGGCCTCCCTAAGCTTCTTGCAGAGGATGTAGTTTTCTCAGCTCTTAAAGCAAGTGCTGCCATGGGATACCTTGCACCAGAATATATTACAACTGGGCGATTTACGGAGAAGAGTGACACATATGCTTTTGGGGTCATTGTCCTTCAAGTTCTATCTGGAAAGGCATTGGTGGGGGGTTCAATCCGGGTTGCAGTTGAAGCTTTTAGATTTGAAGATTTTGTTGACACAAATCTGAAGGGAAATTATTCTAAATCTGAAGCTGCAATTCTTTCAAAGCTTGCAATTATGTGCACCAATGAAGTGCCAGAGCAAAGGCCAACCATGGTGGAGGTGATTCAAGAGCTGGCCATGCTTCCTCTCCATCCTTCATAATCTACCACTTTATGTCTTATTCCTAACATATCTTTTGCCAAATAATTGTTTATTCTGGACATTCATTTCGTTCAACTCATACTTTTACTCTGTAAATCCACAAATCCAGGGGAATCCAATGCTAACTTTACATCATAAATCAT