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Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

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Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_06379 LG1 94374381 94376908 PREDICTED: protein YABBY 4-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   inflorescence meristem growth, regulation of leaf development, polarity specification of adaxial/abaxial axis, regulation of flower development, fruit development, specification of floral organ identity, abaxial cell fate specification, specification of plant organ position, inflorescence meristem growth, cell fate commitment, inflorescence meristem growth, fruit development, regulation of shoot apical meristem development, fruit development, specification of floral organ identity, fruit development, regulation of shoot apical meristem development, polarity specification of adaxial/abaxial axis, regulation of flower development, regulation of leaf development, regulation of leaf development, regulation of flower development, fruit development, regulation of leaf development, meristem structural organization, fruit development, cell fate commitment, specification of floral organ identity, inflorescence meristem growth, abaxial cell fate specification, abaxial cell fate specification, specification of floral organ identity, regulation of flower development, specification of plant organ position, abaxial cell fate specification, regulation of flower development, specification of floral organ identity, cell fate commitment, inflorescence meristem growth, cell fate commitment
Cellular Component   is active in   nucleus
Cellular Component   located in   nucleus, nucleus, nucleus
Molecular Function   enables   transcription cis-regulatory region binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, DNA-binding transcription factor activity, transcription cis-regulatory region binding
No SNPs found.

Sequence Details:

Protein Sequence:
>Vu_06379.1
MSSSSTTISLDHLPPSEQLCYVHCNICDTVLAEEIPNPSPNFLMNQANLSASNEFSLPARTAADELPRPPIINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDITHREAFSAAAKNWAHFPHIHFGLMPDQTVKKTNVCQQEGEEVLMKDGFYASANVGVSPY*


CDS Sequence:
>Vu_06379.1
ATGTCATCCTCTTCCACCACAATATCACTGGACCACCTCCCTCCTTCCGAACAGCTTTGTTATGTTCACTGCAATATTTGTGACACCGTCCTCGCTGAGGAGATACCAAACCCATCTCCAAATTTTCTTATGAACCAAGCAAATTTAAGTGCTTCAAATGAGTTCTCTCTGCCTGCCAGGACTGCAGCTGATGAGCTTCCACGGCCACCGATCATAAACAGACCTCCTGAGAAGAGACAGAGAGTCCCCTCCGCGTACAACCGCTTTATCAAGGACGAGATCCAACGCATCAAGTCTGTCAATCCCGATATAACTCACAGGGAAGCCTTCAGTGCAGCTGCCAAGAATTGGGCCCACTTCCCACACATCCACTTTGGTCTCATGCCTGATCAGACTGTGAAGAAGACAAATGTGTGCCAGCAGGAAGGAGAAGAGGTTCTCATGAAAGATGGGTTTTATGCTTCAGCTAATGTTGGTGTCTCACCCTACTAA


Promoter Sequence:
>Vu_06379::LG1:94376908-94378908(-)
CAAGATTTTACTCATTTTTTGCTGCACACACTGTTGATATCGACGTGTCTTCCGTTTTCATTTGGTTCTTCTGCAGTTTCCAGTCGGAGGAGATAAGGAAAAGACGCAGTTTTATGATTCAATAAGTAACCAAAAAGTTAAACCAGTGTGCATGTATGGCTTTAACGTTGTTTTATATTAAGAAAATACTTCTTCTGCTATTAAAGCGAGACAACTTTCATATATCCTCCTTTGATTTTTGAAAAAAGAATTGTTGTTTCCCTCTCGATATGTTTGATATTGCTTCCTGTTTGAAAAGTTGTTTACAAAGATATCTTCTACTTTTAAGATAATCATGAAAGAAATATAAAAGAGATAAAAGTTTGGAATAAATTACATTCTGTAATGAACAAAACTGGGTAGAATATTGTTTTTTATTTTATTTTTTATAAAAAAGACTAACTGTTCTGGTGGATTTGAATATATGGAATCATCTTAATGATATCTGATTGTAAGGGGCGAATAAAGTTCTCAACTTCCCTGTTAGGAACACATTTAATAATCTTGCACATAGAAAGCACTTGACCCTTGCCATATACAATGGATGATGACACGGTTGTCTTTTTTGGGATGAGGGAATCCCACAGGGCTTACATGAGCATGGATGGCGACGCTTCTGATCGGATCTTTCTCAGATCAATGGATCAAGTTAGGAGTTAACAACCATCAATTTCACCAAATTTTCAAATAGCTAGATCTTATATATATATAGCACCAAAATTATGCATACATATACAATTTACACAATTTTTTTCCCTATATATTTCATTCCATTACACTATCTATTTCACTCACATTTTACTTTATTGTTTTGTTTTATTTTTTATAAAGATGCAAGGCAGAGTTGGTTTGGGGGCTTTGATGTGAAATTGAAATCACTTACATGACAAGATTCTAACTCAATTAGCTAACATAAGTCAAAAGAAATAGAAATATAGGAAAGGACAAAGGTGGTAAGTAGCAAGAGGAAAGTCTGCTCGCTGAGATGTTTTTTTTACTGACTTAAATGCGTATCAGTCTGTGTAAGGCCAGCGAGAGGGAGTTGTCAAATCACCAAAAGTAAACTTGTTTATCTCTTTTTCATAAATAATAGTAATAACAATAATGATGTTATTATTATTATTATTATTATTATTATTATGGAGTTTCTCTAGTTTCACTGGCTGTAGCTTGAATCACGCTTTGAGTGAGGAGCCCTAAGGAAGCGGAAGAGGAAGAGAAAGTGAGAAATAAGTGTTAGGGTTCACTGGGTGGTGGAGTAGTGGGGTTTCATTCTCCTTTGTTCGGAAATTTAGGAAAATTGATTTTAAAATGAAAGTGTTTTTTTGAGAACGCACCACAAGACAAGACCCTCTTTAACTATTGAAAACAACAGGTGAGTGTGTGAAAGCTATATCACTCCATGCACACGTCCCTTTCTGGCTCCTCTCCCCCACATCTGCCGCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACATACACATCGAAATGCCAACCACATATGTTCCCATGTTAATTATATAATAACTTCACCATGTTCATGTACAAACAAACTAAGCCCTCTTCCCTGTACACAGATCATCATGATGATGATGATGAATGTGTGAATACCTCATGAATGCATACATGATACATGCATGCATGCATGGATAGCATCCATGGGAAGCTCTTGTGTGCTCTATAAACAAGAGCAATAAACAGAGAAAGAGAAGGGGTGAATTCTGTGTCTTTCCCTCTCGTAGTATATATCTATCAACCAGACCAGACCAAATAGATCAGCCTCTTTCCCTCTCACTCTTTCTCTGTCTCTCTGCACCTTTCTTTCACAACTCATAATCAAAAAAAGCATATCCAAGGTGTGGTGGTTAAGCTGTCCATCTATCAATCAATCAATCAAGAGACCAATCATCAACCGAATATAAGAGAACGAAAAAAGGGGGCTACCCAAA


Gene Sequence:
>Vu_06379(-)
ATGTCATCCTCTTCCACCACAATATCACTGGACCACCTCCCTCCTTCCGAACAGCTTTGTTATGTTCACTGCAATATTTGTGACACCGTCCTCGCTGTATGAACACATTTTACATTTTCTTACCCCCAAACCTCTTTCCCCCACTTTTCCGACACTAGGGTTTTTCTTCACCTAATGCCTACCTCATCCCCAACACGCTACTCCTCTTTAATTTTTTTCTTTCTCTCTCACCAAATTATCTATCACTTTTTCCATTCATGTTTCTCCCCTTCCATGTTTCAGGTAAGTGTTCCCTGCACAAGCTTGTTCAAGACAGTTACTGTCCGATGCGGCCATTGCACTAACCTCCTGCCAGTGAACATGCGCGGCCTGCTTGTGCCATCTCCTACTCAATTTCATTTGGGTCACTCTTTCTTCTCCCCATCCCATAACCTTCTGGTACTAATTATGTGTTTCTATACATCACCATACTTCTCTTTTATTCTCAATTTACTCCTCGTCTTTTTAATAAATTACTCTATCGGTGCTAGTACACTGTTACCCTCTTCTTATTTATATGAACTAGGAGTTAAAGAGGTGTTGGGTTCATTCTCAGTATAATTTATTTATTGCTTGGTGGATGACATGTTCCATTTCTGCAGGAGGAGATACCAAACCCATCTCCAAATTTTCTTATGAACCAAGCAAATTTAAGTGCTTCAAATGAGTTCTCTCTGCCTGCCAGGACTGCAGCTGATGAGCTTCCACGGCCACCGATCATAAACAGACGTGAGATAAAATATACTCTTCTATTTATTTATTTTTTTACATTTATATGACTGAAAAATAACTCGGATTTCTCTCGTTCAAAATTAAGGTTCCCTTTCGTGTTCACCCATGATCTTGTATTCACCCCAATAATGAAGTTATCTTTTAGATGAAAGCAGCATTCGCGTAGTAAAATACACTGTTGTTTTTCAAAGGAAAATAAATCATGTCGTTGCTTTTATGGTCAATATTGACAGGACCAGTTCCTTTGGTAGAAAAAAAAAGGTCTTTTAAAGGTTTCATCGCGACAGTACCTAAAACCCTTCCTTGTTTCCAACCGCACATTCCCTAAAAACTTATCAAAGATCCTAATAACTAAATAATGACAAGGTCTATATAGACATCATGACCCTAATTAAGCCTAGAAGAGACTTTTAATATCTGGGAAGAGTAATTAATGTAAAAGAACTGCAAGTATTACCTACTAGTATTTCTGATTCTAGGGCACAGTCTGTGAGGCGGTGTTGTTTCACTTTCACTTTTATCAATAATATTTTAGTTTGCCTTCGATTAGTTTTTTGTTATAAGCACCGACAGAGATGAAGAAAAACATAGGTTACTTTGGCGTTCATATGTGGCAGGAAGGAAAATAGTTGGTAGAAAGAGAAAAACATGTAGGGGCAGCTTGTTCTCCCCCGGAATTATAGTTGCTTAAAACCCTTAACACTGAGTATCATCAGAATCGGAAGCATGGATGTGTATACAGACAGAGGCAGTGATGCCCCTTGCCACGGAAAATAGGGAATTTAAATAGCTAGATAAAATAAATGTTGCATCTGCAAAGTCAAAGGAAATGATTTTGATATATGACTGTGTGCCATTGTCCAGCTCCTGAGAAGAGACAGAGAGTCCCCTCCGCGTACAACCGCTTTATCAAGTGAGTATTCATTTTAAAGCATTCATATTTTATTATTTTATTTAAATTTTTAACAACTTCATATTTATTGATTAAAATTGTACTTTGTTCTTATGAAAGGCTTTTAAAGTTGAAGCAAATTTGAATGGTCCATGTATATTTCTGCAGGGACGAGATCCAACGCATCAAGTCTGTCAATCCCGATATAACTCACAGGGAAGCCTTCAGTGCAGCTGCCAAGAATGTATCATCCTTTTTCCTCCTCTTGAATAAATAAATAAACAAATACAACAATGGGGTTACGTACTAGGGTTTCCATAAATTAAACAGTTAGTCGCATATATGTTTTCTTTCCAAATGTTGCATAGTTTTTTATAAGCAAAGTTTTATTATTTATCTAAATATCTAATATATACCATTAATTATTCATAGATTTGTTAACATTTTTCACAAGAAAAGAATACATTTCCTTACACCAGAACACATGTTTTCAAATACTTTTTTCAAGTACTGGCTAGTATTTCCTCCTCCTAGTTCTACAATGAAATAAATTAATGAAAAGGTTTTCTGGCTCACTTTGAACTTCTTCTGATGTATGACGTGCTTTGTGTGTCAGTGGGCCCACTTCCCACACATCCACTTTGGTCTCATGCCTGATCAGACTGTGAAGAAGACAAATGTGTGCCAGCAGGTAAATTATCATGCACCCTCTTCTAGCAAAATGTTGCAGACAAAATAATACATAACCCTGACTTTGATTTCTGAGTGTGTGGGTGTGTTTTTCTCTTTTGTCCAGGAAGGAGAAGAGGTTCTCATGAAAGATGGGTTTTATGCTTCAGCTAATGTTGGTGTCTCACCCTACTAA

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This project is funded by the Department of Biotechnology
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